Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g00980.t01
CDS Infomation

cds chromosome:12X:18:20434241:20435902:1 gene:VIT_18s0072g00980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGCTATCTCGGAGCGTCTCAGTCTGGGGAAATGAAAAGGAGCCAAACCCATGT
GCATGGAAGGGAGTTTCATGCAGCTCCGACAACTCCTCAATAGCCAATCTTTCCCTCTCG
GGATTGTCTCTCTCTGACTCTAGTTTTCTGCCACTTGTCTGTGAGATTGTGTCTTTGGAA
GCTCTTGACCTCTCCGACAACTCTTTCAGCTCTGTTCCAGAAGGGTTCATCACTGCTTGT
GGGAAGATTGATGGGTTGAAGCAGCTGAATTTCAGTAAGAACAGGTTGGTCGGTTCTTTG
CCTGCTTTTAATGGCTTTGTTGGGTTAGAGTCGTTGGATTTTTCCAGTAACATGTTGAAT
GGAACAATTGTTTCACAGTTAGGGTCATTGAATGATCTAAAAAGATTGTACCTTACGTCC
AATAATTTGAGTGGTAATGTTCCCATCAACCTTGGAAATTCCAAGGTGTTAGAGCATCTT
ATTCTTTCCAAGAATTCCTTCACTGGTAGTATTCCTGATGGGCTCCTAGAATATCGGAAG
TTGGTTCGGATTGATTTGAGTGAAAATCAACTTTCTGGGCCTTTACCTGGGAAAATTGGA
GACCTTTCCGAGCTGGAAGAGTTGACTCTGTCTTCCAATAATTTGAGTGGAGAAATCCCA
ATGAACCTTTCAAATTTCCAAAATCTTTTGAGATTCGCCGCGAATCAGAACAAGTTCACA
GGCAATATTCCAGTTGGAATTTCAAGATCTCTCAAGAACTTGGATCTTAGTTATAATAAA
TTAGGTGGGCCAATTCCTGCTGACCTTTTGATGCAGTCGAATTTGCAGACAGTGGATCTT
TCTTACAATCTGCTAGAGGGATCAATACCTGCAAAAATATCTCCAAACATGGTTAGGTTG
AGATTAGGAAGCAATTCACTTGATGGTACTATCCCATCTGAACTTGGAACGCTACCGAAA
TTGACTTACTTGGAGCTGGAAAACAATAGCTTGTCGGGATCCATCCCTTCCAAGTTGGGT
TCTTGCCGGAGTTTGGCGCTGTTGAATCTGGGAATGAATAACTTGACTGGCAGTCTGCCT
GTGGAGTTGGCTAGTCTTAGCAGTCTTCAAGTTCTGAAGCTTCAGTCCAACAAGCTGGTT
GGTGAGATCCCATATCAGATGAACCAAATGCAAAGTTTGTCCACTCTGGATATTAGTGGG
AATTTGCTTAGTGGTTCAATCCCAAATTCAATTTCAAGGTTGCGGAGTCTCACCAAGTTG
AACTTACAAGGCAACCTTTTCAATGGTTCAATACCTGCAACAATTGACAGCTTGAAGAAT
CTGTTAGAACTTCAGCTTGGAAGCAATCGACTGAATGGCCATATTCCAGGGATGCCACTT
AGCTTGCAGATTGCTTTGAATCTCAGCCACAACCTCTTCGAAGGAACTATCCCTGATACT
CTCTCTCGTTTGCGGGGTTTAGAAGTATTGGATCTCTCAAACAACAAATTCTCAGGTGAG
ATTCCAACTTCTCTGACACAAATTGGATCACTGACACAACTGCTACTTGCAAATAATCAG
CTGTCTGGAGTGATTCCGGAGTTTGGAAAATATGTTACCATCATTGATACAACGGGAAAT
CCAAGGCTAGTTAACAGAACATTACAACGTAAATCTCCCTAG

Peptide Sequence

PEP ID

VIT_18s0072g00980.t01
PEP Infomation

pep chromosome:12X:18:20434241:20435902:1 gene:VIT_18s0072g00980 transcript:VIT_18s0072g00980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKLSRSVSVWGNEKEPNPCAWKGVSCSSDNSSIANLSLSGLSLSDSSFLPLVCEIVSLE
ALDLSDNSFSSVPEGFITACGKIDGLKQLNFSKNRLVGSLPAFNGFVGLESLDFSSNMLN
GTIVSQLGSLNDLKRLYLTSNNLSGNVPINLGNSKVLEHLILSKNSFTGSIPDGLLEYRK
LVRIDLSENQLSGPLPGKIGDLSELEELTLSSNNLSGEIPMNLSNFQNLLRFAANQNKFT
GNIPVGISRSLKNLDLSYNKLGGPIPADLLMQSNLQTVDLSYNLLEGSIPAKISPNMVRL
RLGSNSLDGTIPSELGTLPKLTYLELENNSLSGSIPSKLGSCRSLALLNLGMNNLTGSLP
VELASLSSLQVLKLQSNKLVGEIPYQMNQMQSLSTLDISGNLLSGSIPNSISRLRSLTKL
NLQGNLFNGSIPATIDSLKNLLELQLGSNRLNGHIPGMPLSLQIALNLSHNLFEGTIPDT
LSRLRGLEVLDLSNNKFSGEIPTSLTQIGSLTQLLLANNQLSGVIPEFGKYVTIIDTTGN
PRLVNRTLQRKSP

Transcript Sequence

Transcript ID

VIT_18s0072g00980.t01
Transcript Infomation

cdna chromosome:12X:18:20434241:20435902:1 gene:VIT_18s0072g00980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGCTATCTCGGAGCGTCTCAGTCTGGGGAAATGAAAAGGAGCCAAACCCATGT
GCATGGAAGGGAGTTTCATGCAGCTCCGACAACTCCTCAATAGCCAATCTTTCCCTCTCG
GGATTGTCTCTCTCTGACTCTAGTTTTCTGCCACTTGTCTGTGAGATTGTGTCTTTGGAA
GCTCTTGACCTCTCCGACAACTCTTTCAGCTCTGTTCCAGAAGGGTTCATCACTGCTTGT
GGGAAGATTGATGGGTTGAAGCAGCTGAATTTCAGTAAGAACAGGTTGGTCGGTTCTTTG
CCTGCTTTTAATGGCTTTGTTGGGTTAGAGTCGTTGGATTTTTCCAGTAACATGTTGAAT
GGAACAATTGTTTCACAGTTAGGGTCATTGAATGATCTAAAAAGATTGTACCTTACGTCC
AATAATTTGAGTGGTAATGTTCCCATCAACCTTGGAAATTCCAAGGTGTTAGAGCATCTT
ATTCTTTCCAAGAATTCCTTCACTGGTAGTATTCCTGATGGGCTCCTAGAATATCGGAAG
TTGGTTCGGATTGATTTGAGTGAAAATCAACTTTCTGGGCCTTTACCTGGGAAAATTGGA
GACCTTTCCGAGCTGGAAGAGTTGACTCTGTCTTCCAATAATTTGAGTGGAGAAATCCCA
ATGAACCTTTCAAATTTCCAAAATCTTTTGAGATTCGCCGCGAATCAGAACAAGTTCACA
GGCAATATTCCAGTTGGAATTTCAAGATCTCTCAAGAACTTGGATCTTAGTTATAATAAA
TTAGGTGGGCCAATTCCTGCTGACCTTTTGATGCAGTCGAATTTGCAGACAGTGGATCTT
TCTTACAATCTGCTAGAGGGATCAATACCTGCAAAAATATCTCCAAACATGGTTAGGTTG
AGATTAGGAAGCAATTCACTTGATGGTACTATCCCATCTGAACTTGGAACGCTACCGAAA
TTGACTTACTTGGAGCTGGAAAACAATAGCTTGTCGGGATCCATCCCTTCCAAGTTGGGT
TCTTGCCGGAGTTTGGCGCTGTTGAATCTGGGAATGAATAACTTGACTGGCAGTCTGCCT
GTGGAGTTGGCTAGTCTTAGCAGTCTTCAAGTTCTGAAGCTTCAGTCCAACAAGCTGGTT
GGTGAGATCCCATATCAGATGAACCAAATGCAAAGTTTGTCCACTCTGGATATTAGTGGG
AATTTGCTTAGTGGTTCAATCCCAAATTCAATTTCAAGGTTGCGGAGTCTCACCAAGTTG
AACTTACAAGGCAACCTTTTCAATGGTTCAATACCTGCAACAATTGACAGCTTGAAGAAT
CTGTTAGAACTTCAGCTTGGAAGCAATCGACTGAATGGCCATATTCCAGGGATGCCACTT
AGCTTGCAGATTGCTTTGAATCTCAGCCACAACCTCTTCGAAGGAACTATCCCTGATACT
CTCTCTCGTTTGCGGGGTTTAGAAGTATTGGATCTCTCAAACAACAAATTCTCAGGTGAG
ATTCCAACTTCTCTGACACAAATTGGATCACTGACACAACTGCTACTTGCAAATAATCAG
CTGTCTGGAGTGATTCCGGAGTTTGGAAAATATGTTACCATCATTGATACAACGGGAAAT
CCAAGGCTAGTTAACAGAACATTACAACGTAAATCTCCCTAG