Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g00880.t01
CDS Infomation

cds chromosome:12X:18:20255685:20261710:1 gene:VIT_18s0072g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGATCCTTCTTTTGAGGCTGGACGTCCCGGAGAAGCTGCAGTGGAGTTGGGACGG
GTAATAGACCGCGGTTTAAGGGAAAGCAGGGCAGTGGATATGGAATCACTTTGTGTTCTT
GCTGGCAAGTTGGTATGGTCTATCCGAATTGATCTCCACATTATTGATAATGGGGGAAAT
CTTATTGATGCCGCTAATATTGCTGCTTTGGCTGCTCTGTTGACATTTCGAAGGCCTGAA
TGTTCATTCGGAGGGGAAGATGGTCAGGAACTGATAGTACATCCACCTGAGGTGAGGGAG
CCACTTCCTTTGATTGTACATCATCTCCCAATAGCAGTGACCTTTGCAATTATTGGGAAT
GAGAACATTATGGTGATAGATCCAACCCACAGTGAAGAGGCTGTTATGGGTGGAAGAATG
ACTGCTACACTTAATACAAATGGTGATGTCTGTGCTATTCAAAAAGCTGGAGGAGAGGGT
ATCATTCAGAGTGTTATCATGCAGTGCTTGCGAATTGCTTCAGTGAAGGCTGCTGATATA
ACAAGCAAGATAAAAAATGCAGTTGAAGCATTCAACACAGAAAGAGCATTGCGGAAGATC
AAGCGCCACTCTTCTTCCATAGCTGTGGATGTTAGTGGACCAGGTGCTAAAATGAGGGAG
AACAAAAATCAATCTGTTGATGAGAAGGTAGTCAATGAGTTATCAAGCCATCACATGGAG
AGGTTGAAGATGGAATCAGAAGAAAGCTGTGTCACTCAGAGCAGTGATGTGGAAGTTAAA
ACCCAATTATCTGAACAAGGAAGAACTAACAGGAGTGATGAGAACACCAGAAGTTTCATT
GGTGGCCCCTCAAGTTGGGATCCATACTCGAAGGGCATTGATTCGGATTTCCTGAAAGCT
TCTCTAGCTTCACATGGATTGATAAAACAGAACACAAAACAAAAAGATTCAAGAGGTGAA
ATGAAGGCCCCTGACGTAAAGTCAGAGGAACCAAATGCTGATATTGATCCAGCTCTTTGT
CCAATGAAAACTGTTGGAACCACACCCCAAACAAATGGAGAGAAGACATTGAAGGATGCA
GTAAAGCCTAAGAACAAGAGAAAGAAGAAGGCATCCCCCAACACTAATGCAAGGTAG

Peptide Sequence

PEP ID

VIT_18s0072g00880.t01
PEP Infomation

pep chromosome:12X:18:20255685:20261710:1 gene:VIT_18s0072g00880 transcript:VIT_18s0072g00880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADPSFEAGRPGEAAVELGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGN
LIDAANIAALAALLTFRRPECSFGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGN
ENIMVIDPTHSEEAVMGGRMTATLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADI
TSKIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHME
RLKMESEESCVTQSSDVEVKTQLSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKA
SLASHGLIKQNTKQKDSRGEMKAPDVKSEEPNADIDPALCPMKTVGTTPQTNGEKTLKDA
VKPKNKRKKKASPNTNAR

Transcript Sequence

Transcript ID

VIT_18s0072g00880.t01
Transcript Infomation

cdna chromosome:12X:18:20255685:20261710:1 gene:VIT_18s0072g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCAAACTCATGTGATGGGGTTTGTTACTGGGCAACTTATTCAGCCTTATAGGGATAGAC
CTAATGAGGGGACGCTTTCAATTTATACTGAATTCTCTCCCATGGCTGATCCTTCTTTTG
AGGCTGGACGTCCCGGAGAAGCTGCAGTGGAGTTGGGACGGGTAATAGACCGCGGTTTAA
GGGAAAGCAGGGCAGTGGATATGGAATCACTTTGTGTTCTTGCTGGCAAGTTGGTATGGT
CTATCCGAATTGATCTCCACATTATTGATAATGGGGGAAATCTTATTGATGCCGCTAATA
TTGCTGCTTTGGCTGCTCTGTTGACATTTCGAAGGCCTGAATGTTCATTCGGAGGGGAAG
ATGGTCAGGAACTGATAGTACATCCACCTGAGGTGAGGGAGCCACTTCCTTTGATTGTAC
ATCATCTCCCAATAGCAGTGACCTTTGCAATTATTGGGAATGAGAACATTATGGTGATAG
ATCCAACCCACAGTGAAGAGGCTGTTATGGGTGGAAGAATGACTGCTACACTTAATACAA
ATGGTGATGTCTGTGCTATTCAAAAAGCTGGAGGAGAGGGTATCATTCAGAGTGTTATCA
TGCAGTGCTTGCGAATTGCTTCAGTGAAGGCTGCTGATATAACAAGCAAGATAAAAAATG
CAGTTGAAGCATTCAACACAGAAAGAGCATTGCGGAAGATCAAGCGCCACTCTTCTTCCA
TAGCTGTGGATGTTAGTGGACCAGGTGCTAAAATGAGGGAGAACAAAAATCAATCTGTTG
ATGAGAAGGTAGTCAATGAGTTATCAAGCCATCACATGGAGAGGTTGAAGATGGAATCAG
AAGAAAGCTGTGTCACTCAGAGCAGTGATGTGGAAGTTAAAACCCAATTATCTGAACAAG
GAAGAACTAACAGGAGTGATGAGAACACCAGAAGTTTCATTGGTGGCCCCTCAAGTTGGG
ATCCATACTCGAAGGGCATTGATTCGGATTTCCTGAAAGCTTCTCTAGCTTCACATGGAT
TGATAAAACAGAACACAAAACAAAAAGATTCAAGAGGTGAAATGAAGGCCCCTGACGTAA
AGTCAGAGGAACCAAATGCTGATATTGATCCAGCTCTTTGTCCAATGAAAACTGTTGGAA
CCACACCCCAAACAAATGGAGAGAAGACATTGAAGGATGCAGTAAAGCCTAAGAACAAGA
GAAAGAAGAAGGCATCCCCCAACACTAATGCAAGGTAGACTGACCTTTGAGAAAGAAGAA
GCGCCCCCCAACACTATTGCGAGGTAGACTGACCTTTGCCAAAAGAAGTATCTTCTCCCA
GCATGTATATTATTTTTACCCTAATTCCTGTAATAAAATTCCATTTTTGGATTTTGTCAA
ACCCAACTGCTAACACATTGGTGTTAGAGATCTCATATCATATGTGTGAAGCCATTCCCT
CTCTTTCTGTATTTGCATATGTATTGGGGTTTGAGTTTCTTTATCTAAATTCAATT