Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g00840.t01
CDS Infomation

cds chromosome:12X:18:20208098:20209841:-1 gene:VIT_18s0072g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCTCAAAGATAGGCTTTCTGTAGATACCTGGACACAATCATCTTCATCCGGGAAT
GAATTACCGAAAGATCAACAATCATTCACCAATTTTAGTTTGCAGCAGCAGCAGCATCAG
CATAAGTGGGAAGATCCTTCTGTGCTAGATTACAGTGTTAGGATTGAACCAGCTTTCCAG
GAATTCAACCAGACTTCTGCAACCTCATCATCTCTTCCTTGCAACCCTAATAGTCAAATC
AAAAACTTGAACCGAGAAGATTGTCAGATGAATGAGATGCTAGAACCCAATAGAATCCAA
GACTGGGATCCAAGAGTGATGCTTAGCAATCTCTCTTTCCTGGAACAGAAGATACATCAA
CTCCAGGATTTAGTCCATCTGATTGTTGGTCGGAGAAGCCAAGTTTTGGGTCGAACAAAT
GAACTTGTAGCTCAGCAGCAGCAGCTTGTCACTGCTGATCTCACTTCTATTATTGTTCAA
TTGATCACGACTGCTGGTACTCTTCTCCCATCTGTGAAGAATACCCTTTCGACGGCTAGT
CCTTCTGTTGGACAGCTTGGGCAGCTTGGTGGAGTACTGTTTCCTTCAGGAACAGGCATG
AATGGGGGTGGTGTGGCACAAAGTAGTGGTGGAAGCAAGGTTTCTGATCAGTCTAACCAG
ATTGATCTAACTGGTGCTTGTGTAATTGAACAAAACAATGCTACTGAAGAACATGAACTG
AAAGATGAAGATGATGCTGATGAAGGGGAGAACCTTCCTCCTGGCTCCTATGAGATCTTA
CAGCTAGAAAAGGAAGAAATCCTTGCACCTCACACCCACTTCTGCATGATATGTGGTAAG
GGATTCAAGAGGGATGCGAATTTGAGGATGCACATGAGAGGTCATGGTGATGAATACAAA
ACTCCAGCAGCTCTTGCAAAACCCAACAAGGAATCCAGCTCTGAGCCAGTGCTTATTAAG
AGGTATTCCTGCCCTTTTGCTGGTTGCAAGCGCAACAAGGATCATAAAAAGTTTCAACCT
CTGAAAACCATTTTATGTGTGAAAAACCATTACAAGAGGACTCATTGCGACAAAAGCTAC
ACTTGCAGCAGGTGCAACACCAAGAAGTTCTCAGTTATTGCTGATCTTAAAACTCATGAG
AAGCATTGTGGCAAGGATAAGTGGCTTTGTTCCTGTGGAACCACTTTCTCAAGAAAAGAC
AAGCTTTTTGGGCATATTGCTCTCTTCCAAGGCCACACTCCTGCTATTCCCCTTGATGAA
ACTAAAGGATCTGTTGGGCCATCTGACCGTGGGGAAGGCAATGGAGCAGCAAATAAGGTT
GGAAGTGTGGGGTTCAACTTCAGTTCAAATGCTTCAAGTGGAAGTGGAGTTCAAGATATG
ATGATGGATGTAAAAAGGGGTGCTGACGAGCCTACTGGTTTTTTCTCACCATTGACCTTT
GATCCTTGTAGTCTCGTTGGGTTTCACGAGTTCCCTCGACCCCCATTTGAAGACTCAGAA
AGTTCATTCTCTTTTCTTGTCCCAGGGTCTTGTAGCTATACAAGAAAGACTGGAGGCGAG
TCTAGTTCTAATGATCTTGAGTAG

Peptide Sequence

PEP ID

VIT_18s0072g00840.t01
PEP Infomation

pep chromosome:12X:18:20208098:20209841:-1 gene:VIT_18s0072g00840 transcript:VIT_18s0072g00840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLKDRLSVDTWTQSSSSGNELPKDQQSFTNFSLQQQQHQHKWEDPSVLDYSVRIEPAFQ
EFNQTSATSSSLPCNPNSQIKNLNREDCQMNEMLEPNRIQDWDPRVMLSNLSFLEQKIHQ
LQDLVHLIVGRRSQVLGRTNELVAQQQQLVTADLTSIIVQLITTAGTLLPSVKNTLSTAS
PSVGQLGQLGGVLFPSGTGMNGGGVAQSSGGSKVSDQSNQIDLTGACVIEQNNATEEHEL
KDEDDADEGENLPPGSYEILQLEKEEILAPHTHFCMICGKGFKRDANLRMHMRGHGDEYK
TPAALAKPNKESSSEPVLIKRYSCPFAGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSY
TCSRCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLDE
TKGSVGPSDRGEGNGAANKVGSVGFNFSSNASSGSGVQDMMMDVKRGADEPTGFFSPLTF
DPCSLVGFHEFPRPPFEDSESSFSFLVPGSCSYTRKTGGESSSNDLE

Transcript Sequence

Transcript ID

VIT_18s0072g00840.t01
Transcript Infomation

cdna chromosome:12X:18:20208098:20209841:-1 gene:VIT_18s0072g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTAATTGGCATTTAATTTAGTACCTGAGAAAAGGATTTGAAAATGGATCTCAAAGATA
GGCTTTCTGTAGATACCTGGACACAATCATCTTCATCCGGGAATGAATTACCGAAAGATC
AACAATCATTCACCAATTTTAGTTTGCAGCAGCAGCAGCATCAGCATAAGTGGGAAGATC
CTTCTGTGCTAGATTACAGTGTTAGGATTGAACCAGCTTTCCAGGAATTCAACCAGACTT
CTGCAACCTCATCATCTCTTCCTTGCAACCCTAATAGTCAAATCAAAAACTTGAACCGAG
AAGATTGTCAGATGAATGAGATGCTAGAACCCAATAGAATCCAAGACTGGGATCCAAGAG
TGATGCTTAGCAATCTCTCTTTCCTGGAACAGAAGATACATCAACTCCAGGATTTAGTCC
ATCTGATTGTTGGTCGGAGAAGCCAAGTTTTGGGTCGAACAAATGAACTTGTAGCTCAGC
AGCAGCAGCTTGTCACTGCTGATCTCACTTCTATTATTGTTCAATTGATCACGACTGCTG
GTACTCTTCTCCCATCTGTGAAGAATACCCTTTCGACGGCTAGTCCTTCTGTTGGACAGC
TTGGGCAGCTTGGTGGAGTACTGTTTCCTTCAGGAACAGGCATGAATGGGGGTGGTGTGG
CACAAAGTAGTGGTGGAAGCAAGGTTTCTGATCAGTCTAACCAGATTGATCTAACTGGTG
CTTGTGTAATTGAACAAAACAATGCTACTGAAGAACATGAACTGAAAGATGAAGATGATG
CTGATGAAGGGGAGAACCTTCCTCCTGGCTCCTATGAGATCTTACAGCTAGAAAAGGAAG
AAATCCTTGCACCTCACACCCACTTCTGCATGATATGTGGTAAGGGATTCAAGAGGGATG
CGAATTTGAGGATGCACATGAGAGGTCATGGTGATGAATACAAAACTCCAGCAGCTCTTG
CAAAACCCAACAAGGAATCCAGCTCTGAGCCAGTGCTTATTAAGAGGTATTCCTGCCCTT
TTGCTGGTTGCAAGCGCAACAAGGATCATAAAAAGTTTCAACCTCTGAAAACCATTTTAT
GTGTGAAAAACCATTACAAGAGGACTCATTGCGACAAAAGCTACACTTGCAGCAGGTGCA
ACACCAAGAAGTTCTCAGTTATTGCTGATCTTAAAACTCATGAGAAGCATTGTGGCAAGG
ATAAGTGGCTTTGTTCCTGTGGAACCACTTTCTCAAGAAAAGACAAGCTTTTTGGGCATA
TTGCTCTCTTCCAAGGCCACACTCCTGCTATTCCCCTTGATGAAACTAAAGGATCTGTTG
GGCCATCTGACCGTGGGGAAGGCAATGGAGCAGCAAATAAGGTTGGAAGTGTGGGGTTCA
ACTTCAGTTCAAATGCTTCAAGTGGAAGTGGAGTTCAAGATATGATGATGGATGTAAAAA
GGGGTGCTGACGAGCCTACTGGTTTTTTCTCACCATTGACCTTTGATCCTTGTAGTCTCG
TTGGGTTTCACGAGTTCCCTCGACCCCCATTTGAAGACTCAGAAAGTTCATTCTCTTTTC
TTGTCCCAGGGTCTTGTAGCTATACAAGAAAGACTGGAGGCGAGTCTAGTTCTAATGATC
TTGAGTAGCAGTCAGATTGTTATTTCAATTTTCATTAGGGGTCCTGGGGTTTATTGAAAT
CACATTTCAATGGTTAGGTGACCCATGTACTAGTTATTTCTTGATTTTCAATAAATATTT
TTCT