Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g00820.t01
CDS Infomation

cds chromosome:12X:18:20173049:20175009:-1 gene:VIT_18s0072g00820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCAAGCCTCTTCTTCTTGCACGGCTCTTGCTTCTGCTGAAATTTCGGTGAAGGTG
GAGGTGGGCAGCGGCAGCAGCAGGTGGCGTGGTGTTGGTGGTGATGGTGATGGTGACCTC
ACATTGGGGTTGCCGGACGAGTGCCTGGCGGGGGTGTTTGGGAAGCTGGGCTGTCATGAC
CGAAACACGTGCTCGCTGGTGTGCAGGAGGTGGAGGGCGGTGGATTCCAAATCGAGGCAG
CGGCTGGTTCTGCTTGCTCGCTCCGACGTGTCGCCGTTCCTCCCGGCGCTGCTTTGTCGG
TTCAGTTCCGTTTCGGTTCTGTCTTTGAAATGTTCTCGGAAGATTGTGAGCATCGACGAC
CTGGCGCTGTCTCGAATCCCGACGCTCTTGGCTTCGCTCAAGAAGCTGAAACTCAAGGGC
TGCATCGACGTCACCGACGAAGGCCTCCACGCCTTCTCCCTCCACCGCCCTCTTCTCCTC
ACGAAGCTCTCGTTCGCCTCCTGCGGATTCGGCGCCGGTGGTCTCATTTCTCTCATCTCC
AACTGCCCTTCTCTTCAAGATCTCACCCTCAAGCGCCTCCGCAAGCTGGACGCCCAGAAT
GTGCCCTTGTCCTTCGACCACCCCCACCGCCTGGAGCGCCTTTGCATCAAGGATCTTCAC
AATGCTCGCCTCTTCATCCCTCTCCTCGCCGCCTCCAAGACTCTCAAAGCCCTGGTGGTC
TGCCGGAGCTCCGGCAACTGGGACCCACTTCTTGAGAGCCTCCAACGAGGAGGAGCCACT
AGTGTCTCCGAGATTCAGATGGAGAATGTCCAAATGGGCGACCCAGGCCTCGTCGCCATC
TCCGCCTCCTGCCCCGACCTCGAAGTTCTATACCTGAGCAGGGCTTCCGACTGTACGGAC
GATGGTGTGTCCGCCATTGCCAACTCCTGCAGGAAGCTCAGAAAGCTGCATATCGACGCG
TGGAGCAGGTTCGGAAGCAGGACGATCGGGGACGATGGAGTGTTGTCCATTGCAACAAGA
TGCTCAAACCTCCAAGAGGTGGTTCTAATGGGGATCCCGGTGACCGTTGGCTCCTTCAAT
ATGTTTGCTTCCAACTGCCCAGTACTAGAGCGGATGGCAATCTGCAATACCGACACAGTG
GGGGACTCAGAGCTGGCAGTCATCGCTTCCAAATTCACAGCCTTGAAGAAGCTCTGCATC
AAGAACTGCCCCATCTCCGACACGGGAGTTAAAGCCGTCGGTGAAGGATGCCCCAGCCTG
GTGAAGTTGAAGGTGAAGAGGTGCAGGGGGGTGACACAGGTAAGCGTATCCCAATTGAGA
CTGCAGAGGGGTTCGGTGGTGGTTTCAGTTGATGCAGGATCAATGATATTTGAGGAAGGG
ATGGCGATGGCAGAGGAAGAAACAGGGACAGCCGGAGGAGGAGGAGGAGGTGGTGGTGGA
GTAGAAGGGGGTGGAGGGGAGAGAACTCGTGGGGGACGAATCAGCAGGAGGAGGAGCACA
AGCACAAGCACGAATGTGGTATGCAGCAGCAGAGGGGCACTCTTACTCAGGTCTAAATTT
GAGAATGCTCTGCAGCTCAGTAGGAGGAGCTCCTCTTCAATTCATGCTCCCAGATGA

Peptide Sequence

PEP ID

VIT_18s0072g00820.t01
PEP Infomation

pep chromosome:12X:18:20173049:20175009:-1 gene:VIT_18s0072g00820 transcript:VIT_18s0072g00820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGQASSSCTALASAEISVKVEVGSGSSRWRGVGGDGDGDLTLGLPDECLAGVFGKLGCHD
RNTCSLVCRRWRAVDSKSRQRLVLLARSDVSPFLPALLCRFSSVSVLSLKCSRKIVSIDD
LALSRIPTLLASLKKLKLKGCIDVTDEGLHAFSLHRPLLLTKLSFASCGFGAGGLISLIS
NCPSLQDLTLKRLRKLDAQNVPLSFDHPHRLERLCIKDLHNARLFIPLLAASKTLKALVV
CRSSGNWDPLLESLQRGGATSVSEIQMENVQMGDPGLVAISASCPDLEVLYLSRASDCTD
DGVSAIANSCRKLRKLHIDAWSRFGSRTIGDDGVLSIATRCSNLQEVVLMGIPVTVGSFN
MFASNCPVLERMAICNTDTVGDSELAVIASKFTALKKLCIKNCPISDTGVKAVGEGCPSL
VKLKVKRCRGVTQVSVSQLRLQRGSVVVSVDAGSMIFEEGMAMAEEETGTAGGGGGGGGG
VEGGGGERTRGGRISRRRSTSTSTNVVCSSRGALLLRSKFENALQLSRRSSSSIHAPR

Transcript Sequence

Transcript ID

VIT_18s0072g00820.t01
Transcript Infomation

cdna chromosome:12X:18:20173049:20175009:-1 gene:VIT_18s0072g00820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATCCTACCGGGTAATGGATCGGGCGAGGGACAATGCCAAATGGGGGAGAAGGGTCCATG
CTTATCATGGGTTTCCATCGATGAAAGCAATGCTGCCTTGACCTCTGACGATTAGGCTTT
GGCTATTTGTTCTACTTGTTTTTACTTTTTTCACAAGGGACGACTGGTGCCGCGCTGGAG
ATGGGGCAAGCCTCTTCTTCTTGCACGGCTCTTGCTTCTGCTGAAATTTCGGTGAAGGTG
GAGGTGGGCAGCGGCAGCAGCAGGTGGCGTGGTGTTGGTGGTGATGGTGATGGTGACCTC
ACATTGGGGTTGCCGGACGAGTGCCTGGCGGGGGTGTTTGGGAAGCTGGGCTGTCATGAC
CGAAACACGTGCTCGCTGGTGTGCAGGAGGTGGAGGGCGGTGGATTCCAAATCGAGGCAG
CGGCTGGTTCTGCTTGCTCGCTCCGACGTGTCGCCGTTCCTCCCGGCGCTGCTTTGTCGG
TTCAGTTCCGTTTCGGTTCTGTCTTTGAAATGTTCTCGGAAGATTGTGAGCATCGACGAC
CTGGCGCTGTCTCGAATCCCGACGCTCTTGGCTTCGCTCAAGAAGCTGAAACTCAAGGGC
TGCATCGACGTCACCGACGAAGGCCTCCACGCCTTCTCCCTCCACCGCCCTCTTCTCCTC
ACGAAGCTCTCGTTCGCCTCCTGCGGATTCGGCGCCGGTGGTCTCATTTCTCTCATCTCC
AACTGCCCTTCTCTTCAAGATCTCACCCTCAAGCGCCTCCGCAAGCTGGACGCCCAGAAT
GTGCCCTTGTCCTTCGACCACCCCCACCGCCTGGAGCGCCTTTGCATCAAGGATCTTCAC
AATGCTCGCCTCTTCATCCCTCTCCTCGCCGCCTCCAAGACTCTCAAAGCCCTGGTGGTC
TGCCGGAGCTCCGGCAACTGGGACCCACTTCTTGAGAGCCTCCAACGAGGAGGAGCCACT
AGTGTCTCCGAGATTCAGATGGAGAATGTCCAAATGGGCGACCCAGGCCTCGTCGCCATC
TCCGCCTCCTGCCCCGACCTCGAAGTTCTATACCTGAGCAGGGCTTCCGACTGTACGGAC
GATGGTGTGTCCGCCATTGCCAACTCCTGCAGGAAGCTCAGAAAGCTGCATATCGACGCG
TGGAGCAGGTTCGGAAGCAGGACGATCGGGGACGATGGAGTGTTGTCCATTGCAACAAGA
TGCTCAAACCTCCAAGAGGTGGTTCTAATGGGGATCCCGGTGACCGTTGGCTCCTTCAAT
ATGTTTGCTTCCAACTGCCCAGTACTAGAGCGGATGGCAATCTGCAATACCGACACAGTG
GGGGACTCAGAGCTGGCAGTCATCGCTTCCAAATTCACAGCCTTGAAGAAGCTCTGCATC
AAGAACTGCCCCATCTCCGACACGGGAGTTAAAGCCGTCGGTGAAGGATGCCCCAGCCTG
GTGAAGTTGAAGGTGAAGAGGTGCAGGGGGGTGACACAGGTAAGCGTATCCCAATTGAGA
CTGCAGAGGGGTTCGGTGGTGGTTTCAGTTGATGCAGGATCAATGATATTTGAGGAAGGG
ATGGCGATGGCAGAGGAAGAAACAGGGACAGCCGGAGGAGGAGGAGGAGGTGGTGGTGGA
GTAGAAGGGGGTGGAGGGGAGAGAACTCGTGGGGGACGAATCAGCAGGAGGAGGAGCACA
AGCACAAGCACGAATGTGGTATGCAGCAGCAGAGGGGCACTCTTACTCAGGTCTAAATTT
GAGAATGCTCTGCAGCTCAGTAGGAGGAGCTCCTCTTCAATTCATGCTCCCAGATGATGG
ATTCATGTCTTCAAATCAATTTCCTTTTTCTTTCTATTTCTGTTGGTTTCGTTATTCAAC
TTCCATTGGAGTGCTTTGTTACACTTTAAATTTCCCCTCATTTTCCATGGTTTCTACGCC
AAGTGTTCAGCTTTGAGAAGTGGTATAGATTGAACTTGTTC