Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0072g00780.t01
CDS Infomation

cds chromosome:12X:18:20094449:20140313:1 gene:VIT_18s0072g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGATCAAGAGGAGGAGGACCTGCGGATGGCGCTGCGGATGAGTATGCAGCAGTGG
CCGCCGGAGCCGAAGCGGAGCAAGCCGAGGGAGAGCGGGGGGGCTCCCACCGGGTCGCCG
GATGATTCGCCGGAGGCAAAGAGTAGGCGGTTGCAGAGGGAGCTTATGGCTGCCGCGGCG
GAGAAGCGACTGATGATGTCTGGGAAGCCCGCGTCTCCGGCGCGGAGAAATGTGGCATTT
CCAAAGGAAGAAAAGGATGGGGTTGCCGGAGGTGCGGGAGGTGATGGGCGGAAGGAGGTG
AGTTGTGGAATGGAGCTATCCGATGCCGATGTAAATCAGTTGTTCTCTATGGTCTTTGGT
AATGATGTTTCGAAGGGGATTCTCGCGCAGTGGTGTAATCAGGGAATTAGGTTTAGCCCT
GATCCAGAAACATTTATGGGCCTAGTACAACATGAAGGCGGGCCATGTGGTGTCTTAGCT
GCCATACAAGCCTTTGTTCTGAAGTACCTTATTTTCTTTCCGGATGATTTAGGAAAAGTT
GAACCAAACATGCCAGAAAATGTAGATTCAAGGAGATTTTCTAAAAGTGAATCTGTTACA
TCGAATATGTTTTCTTCTCTTACCGAAGATGGAAAAGCAAGAGCCTTGGTCAGGAGCATG
GGTGAGATACTGTTTTTATGTGGAAGTAATAAAAGGGCTGTGATTGCAACCTTGAGCATT
CTCGTGCATGATGCTGAGGGGTCTGACAGTCTAAAGGATGATATCATGACAAAAGCACTT
GAAGGTGTTTCTATAGAATCAGCTTCTGATTTGCAGACAATTTTAAGAGTTAATACCTAT
ACTTCAATTGCAAATGCATACAAGAGGCTCGAAGCGATGATTCCTGTTTTCCAAAGTCGT
ATGGGGGCACTGCTATTCCTTATTTCTGCTTTACTCTCTCGAGGATTGGACTCCATTCAA
GCTGACAGAGACGATCCGAACCCACCTCTAGTGACTGCTCCATTTGGCCATGCCTCACAG
GAAATTGTAAACTTACTGCTATGCGGGCAGGCTGTCCCTAATGTGTTTGATGGAAGGATG
GATTTAGGTGGGGGCATGTCTTTGAAGGGAATATCCACATGTGTGGAAGTTGGATTCCTT
ACTTTGCTAGAATCCCTGAATTTCTGTAAGGTTGGGCAGTTTCTGAAATGCCCAAAATGG
CCAATATGGGTTGTTGGGAGTGAGTCTCATTATACAGTCCTATTTGCTCTTGATACCACT
GTTCAAGATGAGAATGAACTGGAAGAAAGAGAGTCACAGATCAGGAAGGCATTTGATGCG
CAAGATCAGAGTGGAGGAGGTGGCTTCATCAGTGTGGAAGGGTTCCATCAAGTCCTCAGA
GAAACAGGCATTGACCTTCCACCTGAGAAGCTAGATCACCTCTGTGGGGCTGGGTTTATT
GTATGGAGTGAGTTCTGGCAGGTTCTTCTGGATTTAGACAAGAGATTTGGAGGCTTAAAA
GATCCTACTGGATCAATGGGTAAGAAGGTCTTTGATCTTTACCATTTTAATGGGATTGCA
AAATCGGTCTTGAATGGGAGTCCAGCAGCTTCAGGAAGTGAGATGCCAATTCAAAGACCT
AGACTTACAAAATTGAGGGTTTCAGTTCCCCCAAGATGGACTCCTGAGGAGTTTATGGCA
GATGTTGTATTGCCCTCTGCTTCAGGTGGGAATGACCCAAGTGCAAAAGAAACGGTTATT
GAAGTGGCTAAACCAGAGCCTGCTCAACATGCACCATTGGTGGACTGCATTAGAACGCGC
TGGCCAAGGGCTGTTTGCAACTGGGTGGGGGATCCCCCTAGCATAGTCTGA

Peptide Sequence

PEP ID

VIT_18s0072g00780.t01
PEP Infomation

pep chromosome:12X:18:20094449:20140313:1 gene:VIT_18s0072g00780 transcript:VIT_18s0072g00780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADQEEEDLRMALRMSMQQWPPEPKRSKPRESGGAPTGSPDDSPEAKSRRLQRELMAAAA
EKRLMMSGKPASPARRNVAFPKEEKDGVAGGAGGDGRKEVSCGMELSDADVNQLFSMVFG
NDVSKGILAQWCNQGIRFSPDPETFMGLVQHEGGPCGVLAAIQAFVLKYLIFFPDDLGKV
EPNMPENVDSRRFSKSESVTSNMFSSLTEDGKARALVRSMGEILFLCGSNKRAVIATLSI
LVHDAEGSDSLKDDIMTKALEGVSIESASDLQTILRVNTYTSIANAYKRLEAMIPVFQSR
MGALLFLISALLSRGLDSIQADRDDPNPPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRM
DLGGGMSLKGISTCVEVGFLTLLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLFALDTT
VQDENELEERESQIRKAFDAQDQSGGGGFISVEGFHQVLRETGIDLPPEKLDHLCGAGFI
VWSEFWQVLLDLDKRFGGLKDPTGSMGKKVFDLYHFNGIAKSVLNGSPAASGSEMPIQRP
RLTKLRVSVPPRWTPEEFMADVVLPSASGGNDPSAKETVIEVAKPEPAQHAPLVDCIRTR
WPRAVCNWVGDPPSIV

Transcript Sequence

Transcript ID

VIT_18s0072g00780.t01
Transcript Infomation

cdna chromosome:12X:18:20094449:20140313:1 gene:VIT_18s0072g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGATCAAGAGGAGGAGGACCTGCGGATGGCGCTGCGGATGAGTATGCAGCAGTGG
CCGCCGGAGCCGAAGCGGAGCAAGCCGAGGGAGAGCGGGGGGGCTCCCACCGGGTCGCCG
GATGATTCGCCGGAGGCAAAGAGTAGGCGGTTGCAGAGGGAGCTTATGGCTGCCGCGGCG
GAGAAGCGACTGATGATGTCTGGGAAGCCCGCGTCTCCGGCGCGGAGAAATGTGGCATTT
CCAAAGGAAGAAAAGGATGGGGTTGCCGGAGGTGCGGGAGGTGATGGGCGGAAGGAGGTG
AGTTGTGGAATGGAGCTATCCGATGCCGATGTAAATCAGTTGTTCTCTATGGTCTTTGGT
AATGATGTTTCGAAGGGGATTCTCGCGCAGTGGTGTAATCAGGGAATTAGGTTTAGCCCT
GATCCAGAAACATTTATGGGCCTAGTACAACATGAAGGCGGGCCATGTGGTGTCTTAGCT
GCCATACAAGCCTTTGTTCTGAAGTACCTTATTTTCTTTCCGGATGATTTAGGAAAAGTT
GAACCAAACATGCCAGAAAATGTAGATTCAAGGAGATTTTCTAAAAGTGAATCTGTTACA
TCGAATATGTTTTCTTCTCTTACCGAAGATGGAAAAGCAAGAGCCTTGGTCAGGAGCATG
GGTGAGATACTGTTTTTATGTGGAAGTAATAAAAGGGCTGTGATTGCAACCTTGAGCATT
CTCGTGCATGATGCTGAGGGGTCTGACAGTCTAAAGGATGATATCATGACAAAAGCACTT
GAAGGTGTTTCTATAGAATCAGCTTCTGATTTGCAGACAATTTTAAGAGTTAATACCTAT
ACTTCAATTGCAAATGCATACAAGAGGCTCGAAGCGATGATTCCTGTTTTCCAAAGTCGT
ATGGGGGCACTGCTATTCCTTATTTCTGCTTTACTCTCTCGAGGATTGGACTCCATTCAA
GCTGACAGAGACGATCCGAACCCACCTCTAGTGACTGCTCCATTTGGCCATGCCTCACAG
GAAATTGTAAACTTACTGCTATGCGGGCAGGCTGTCCCTAATGTGTTTGATGGAAGGATG
GATTTAGGTGGGGGCATGTCTTTGAAGGGAATATCCACATGTGTGGAAGTTGGATTCCTT
ACTTTGCTAGAATCCCTGAATTTCTGTAAGGTTGGGCAGTTTCTGAAATGCCCAAAATGG
CCAATATGGGTTGTTGGGAGTGAGTCTCATTATACAGTCCTATTTGCTCTTGATACCACT
GTTCAAGATGAGAATGAACTGGAAGAAAGAGAGTCACAGATCAGGAAGGCATTTGATGCG
CAAGATCAGAGTGGAGGAGGTGGCTTCATCAGTGTGGAAGGGTTCCATCAAGTCCTCAGA
GAAACAGGCATTGACCTTCCACCTGAGAAGCTAGATCACCTCTGTGGGGCTGGGTTTATT
GTATGGAGTGAGTTCTGGCAGGTTCTTCTGGATTTAGACAAGAGATTTGGAGGCTTAAAA
GATCCTACTGGATCAATGGGTAAGAAGGTCTTTGATCTTTACCATTTTAATGGGATTGCA
AAATCGGTCTTGAATGGGAGTCCAGCAGCTTCAGGAAGTGAGATGCCAATTCAAAGACCT
AGACTTACAAAATTGAGGGTTTCAGTTCCCCCAAGATGGACTCCTGAGGAGTTTATGGCA
GATGTTGTATTGCCCTCTGCTTCAGGTGGGAATGACCCAAGTGCAAAAGAAACGGTTATT
GAAGTGGCTAAACCAGAGCCTGCTCAACATGCACCATTGGTGGACTGCATTAGAACGCGC
TGGCCAAGGGCTGTTTGCAACTGGGTGGGGGATCCCCCTAGCATAGTCTGAATGGTTTAT
TATTTTTATTCGGGATCCTTTTAAAGTGCGGTGTGGTTTGAACTCAGAGAGCACAGTGAC
GGTGGCCCCTTGATTTTAGTTAAAAAAAACTTGGGGCACAGGACAAAGAGAATGTTTCTT
TCATTCAAAGTTGATGATGATAAACTATCAGGCACAGGAAAGAGTTTGTTTTTAGTATTT
CGTCAGGTCCCCAATATATGCTTCTCTCCATTTATGCTGTTATTGTTGTGACATTCTAAT
TCGATTTTGATGTCAGAAAAGGGAGGGAAGGATTCCGTGATAATTTATTGCCCCACCCAA
TCTGTAAAATTTATTCTAACTTTCAGGCACAGCACCCTCGTTGATTAGGAATATGTTCTT
TCTATCTCTTAGGGAGGTCATCAATAAAACATAATATCTGTGTTGTTGCTGCCGACA