Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g02080.t01
CDS Infomation

cds chromosome:12X:18:27211388:27214493:1 gene:VIT_18s0041g02080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGGGAAAGTACAAGGACTAAATGGCGTTTCTGCTGAATCCCTCATCCCTCTCATC
ACTCCATACAAGTTGGGCAAGTTCCAGCTCTCTCACAGGGTTGTTCTAGCACCATTAACA
AGACAGAGATCTTGGAACAATGTTCCTCAACCACATGCTATCTTATATTACTCTCAAAGA
ACCAGCAAAGGGGGTCTTCTCATAGCCGAAGCAACAGGAGTTTCTGACACTGCTCAAGGG
TATCCCCATACACCGGGCATATGGACAAAAGAACAAGTTGAAGCATGGAAACCTATTGTC
GATGCTGTACATGCTAAAGGCGGTATCTTTTTTTGTCAGATTTGGCATGTGGGGAGGGTT
TCAAACACGGATTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTG
ACACCCCAAATCCGAAGCAATGGCATTGATGTTGCCCAGTTCTCAACTCCACGGCGGCTA
ACAACAGATGAAATCCCTCAAGTTGTAAATGATTTTAGACTTGCTGCAAGGAATGCTATT
GAAGCTGGATTTGATGGAGTTGAGATCCATGGGGCTCATGGCTACCTACTTGACCAGTTC
ATGAAAGACCAGGTCAACGATCGAACTGATAAATATGGCGGATCCCTAGAGAACAGATGC
GGGTTTGCTTTGGAAGTAGTTGAAGCTGTCGTTGATGAGATAGGGGCAGATAAAGTTGGA
ATAAGGCTTTCTCCATTTGCTGCTTATGCAGAAGCAGGAGACTCAAATCCAAAAGCTCTA
GGCCTTTACATGGCTGAGTCCTTGAATAAATACGGGCTTCTCTACTGCCACATGGTTGAG
CCAAGGATGAAAACAGTCGGAGAAAAATGCGAATGCCCCCATAGTCTTTTGCCCATGAGA
AAAGCTTTCAATGGTACATTCCTTGTTGCTGGGGGGTATGACAGAGAAGACGGGAACAAT
GCTCTGGCTGAGAATCGTGCAGATCTTGTTGCGTATGGGCGTTGGTTCTTGGCCAACCCA
GATCTTCCTAAGAGATTTGCGCTCAATGCTCCTCTCAACAAGTACAACAGAGAAACCTTC
TATACACCTGATCCTGTTCTTGGTTACACTGATTATCCATTTCTTGAAGACATCGAGTAG

Peptide Sequence

PEP ID

VIT_18s0041g02080.t01
PEP Infomation

pep chromosome:12X:18:27211388:27214493:1 gene:VIT_18s0041g02080 transcript:VIT_18s0041g02080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGKVQGLNGVSAESLIPLITPYKLGKFQLSHRVVLAPLTRQRSWNNVPQPHAILYYSQR
TSKGGLLIAEATGVSDTAQGYPHTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRV
SNTDFQPNGQAPISCTDKPLTPQIRSNGIDVAQFSTPRRLTTDEIPQVVNDFRLAARNAI
EAGFDGVEIHGAHGYLLDQFMKDQVNDRTDKYGGSLENRCGFALEVVEAVVDEIGADKVG
IRLSPFAAYAEAGDSNPKALGLYMAESLNKYGLLYCHMVEPRMKTVGEKCECPHSLLPMR
KAFNGTFLVAGGYDREDGNNALAENRADLVAYGRWFLANPDLPKRFALNAPLNKYNRETF
YTPDPVLGYTDYPFLEDIE

Transcript Sequence

Transcript ID

VIT_18s0041g02080.t01
Transcript Infomation

cdna chromosome:12X:18:27211388:27214493:1 gene:VIT_18s0041g02080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTACTTAATCGATTATTTTCTACGAAAAGAAAAGAAACAGAGAAACCAAACACTGATGGA
CGGGAAAGTACAAGGACTAAATGGCGTTTCTGCTGAATCCCTCATCCCTCTCATCACTCC
ATACAAGTTGGGCAAGTTCCAGCTCTCTCACAGGGTTGTTCTAGCACCATTAACAAGACA
GAGATCTTGGAACAATGTTCCTCAACCACATGCTATCTTATATTACTCTCAAAGAACCAG
CAAAGGGGGTCTTCTCATAGCCGAAGCAACAGGAGTTTCTGACACTGCTCAAGGGTATCC
CCATACACCGGGCATATGGACAAAAGAACAAGTTGAAGCATGGAAACCTATTGTCGATGC
TGTACATGCTAAAGGCGGTATCTTTTTTTGTCAGATTTGGCATGTGGGGAGGGTTTCAAA
CACGGATTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTGACACC
CCAAATCCGAAGCAATGGCATTGATGTTGCCCAGTTCTCAACTCCACGGCGGCTAACAAC
AGATGAAATCCCTCAAGTTGTAAATGATTTTAGACTTGCTGCAAGGAATGCTATTGAAGC
TGGATTTGATGGAGTTGAGATCCATGGGGCTCATGGCTACCTACTTGACCAGTTCATGAA
AGACCAGGTCAACGATCGAACTGATAAATATGGCGGATCCCTAGAGAACAGATGCGGGTT
TGCTTTGGAAGTAGTTGAAGCTGTCGTTGATGAGATAGGGGCAGATAAAGTTGGAATAAG
GCTTTCTCCATTTGCTGCTTATGCAGAAGCAGGAGACTCAAATCCAAAAGCTCTAGGCCT
TTACATGGCTGAGTCCTTGAATAAATACGGGCTTCTCTACTGCCACATGGTTGAGCCAAG
GATGAAAACAGTCGGAGAAAAATGCGAATGCCCCCATAGTCTTTTGCCCATGAGAAAAGC
TTTCAATGGTACATTCCTTGTTGCTGGGGGGTATGACAGAGAAGACGGGAACAATGCTCT
GGCTGAGAATCGTGCAGATCTTGTTGCGTATGGGCGTTGGTTCTTGGCCAACCCAGATCT
TCCTAAGAGATTTGCGCTCAATGCTCCTCTCAACAAGTACAACAGAGAAACCTTCTATAC
ACCTGATCCTGTTCTTGGTTACACTGATTATCCATTTCTTGAAGACATCGAGTAGATTCT
CAAAGGTGTAGGATTAGAACTTGAATCATTTTTCAGTGATATAAGCATCCCGAATGCCAT
AGTCGTTATTTTCTTGTGCCCCTTTCAGATAGTTTCCACGTAATTGTAAGGGTG