Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g02050.t01
CDS Infomation

cds chromosome:12X:18:27178512:27179917:-1 gene:VIT_18s0041g02050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGTTCTGGCTCCACTAACTAGACAGAGATCTTGGGACAATGTTCCTCAGCCCCAT
GCAATCTTGTATTACTCCCAGAGAGCCACTAAAGGGGGGCTTCTCATAACTGAAGCAACT
GGAGTTTCCGACACTGCTCAAGGCTATGCACATACCCCGGGTATATGGACAAAAGAGCAA
GTTGAAGCCTGGAAGCCCATTGTAGATGCTGTTCATGCTAAAGGCAGTATCTTTATTTGT
CAGCTTTGGCATGTGGGAAGAGTTTCAAACACAGAATTCCAGCCAAATGGGCAAGCTCCA
TTATCTTCTACAGACAAGGCATTGACGCCACAAGTCCGAAGCAATGGCTTTGATGTTGCT
GAGTTCACAGCTCCTAGGCGGCTAACAACAGATGAAGTTCCTCGAGTTGTCAATGATTTT
AGACTTGCTGCAAGAAATGCTATGGAAGCTGGTTTTGATGGAGTTGAGATCCATGGAGCT
CATGGCTATCTACTTGACCAGTTCATGAAAGACCAGGTCAATGATCGAACAGACAAGTAT
GGTGGATCACTAGAGAACCGTTGCAGGTTCCCATTGGAAGTAGTAGAAGCGGTCGTTAAT
GAGATAGGAGCTGATAAGGTTGGAATAAGGCTTTCTCCATTTGGCCATCATGCCGAGGCA
GGAGACTCCAATCCAACAGCTCTGGGCCTTTACATGGTTGAATCCTTAAACAAATATGGT
GTCCTCTATTGCCACATGGTTGAGCCAAGGATAAGAGCAGCCGGAGAAATGTGTGAGTGT
CCCCACAGCCTCGTGCCCTTGAGAAAGGCTTTCAATGGCACATTCATAGCCGCTGGGGGT
TATGTGAAAGAAGACGGAAACAATGCTGTGGCTGAGGAGCGTGCAGATCTTGTTGCATTT
GGACGTTGGTTCTTAGCCAACCCAGATCTTCCAGAAAGATTTGCGCTCAATGCTCCTCTC
AACAAGTATAACAGGGAGACATTCTACGCACCCGAACCCATAATCGGCTACACTGATTAT
CCATTTCTTGAGGATATTGTTGAGTAG

Peptide Sequence

PEP ID

VIT_18s0041g02050.t01
PEP Infomation

pep chromosome:12X:18:27178512:27179917:-1 gene:VIT_18s0041g02050 transcript:VIT_18s0041g02050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVVLAPLTRQRSWDNVPQPHAILYYSQRATKGGLLITEATGVSDTAQGYAHTPGIWTKEQ
VEAWKPIVDAVHAKGSIFICQLWHVGRVSNTEFQPNGQAPLSSTDKALTPQVRSNGFDVA
EFTAPRRLTTDEVPRVVNDFRLAARNAMEAGFDGVEIHGAHGYLLDQFMKDQVNDRTDKY
GGSLENRCRFPLEVVEAVVNEIGADKVGIRLSPFGHHAEAGDSNPTALGLYMVESLNKYG
VLYCHMVEPRIRAAGEMCECPHSLVPLRKAFNGTFIAAGGYVKEDGNNAVAEERADLVAF
GRWFLANPDLPERFALNAPLNKYNRETFYAPEPIIGYTDYPFLEDIVE

Transcript Sequence

Transcript ID

VIT_18s0041g02050.t01
Transcript Infomation

cdna chromosome:12X:18:27178512:27179917:-1 gene:VIT_18s0041g02050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATGGTGGTTCTGGCTCCACTAACTAGACAGAGATCTTGGGACAATGTTCCTCAGCCCCA
TGCAATCTTGTATTACTCCCAGAGAGCCACTAAAGGGGGGCTTCTCATAACTGAAGCAAC
TGGAGTTTCCGACACTGCTCAAGGCTATGCACATACCCCGGGTATATGGACAAAAGAGCA
AGTTGAAGCCTGGAAGCCCATTGTAGATGCTGTTCATGCTAAAGGCAGTATCTTTATTTG
TCAGCTTTGGCATGTGGGAAGAGTTTCAAACACAGAATTCCAGCCAAATGGGCAAGCTCC
ATTATCTTCTACAGACAAGGCATTGACGCCACAAGTCCGAAGCAATGGCTTTGATGTTGC
TGAGTTCACAGCTCCTAGGCGGCTAACAACAGATGAAGTTCCTCGAGTTGTCAATGATTT
TAGACTTGCTGCAAGAAATGCTATGGAAGCTGGTTTTGATGGAGTTGAGATCCATGGAGC
TCATGGCTATCTACTTGACCAGTTCATGAAAGACCAGGTCAATGATCGAACAGACAAGTA
TGGTGGATCACTAGAGAACCGTTGCAGGTTCCCATTGGAAGTAGTAGAAGCGGTCGTTAA
TGAGATAGGAGCTGATAAGGTTGGAATAAGGCTTTCTCCATTTGGCCATCATGCCGAGGC
AGGAGACTCCAATCCAACAGCTCTGGGCCTTTACATGGTTGAATCCTTAAACAAATATGG
TGTCCTCTATTGCCACATGGTTGAGCCAAGGATAAGAGCAGCCGGAGAAATGTGTGAGTG
TCCCCACAGCCTCGTGCCCTTGAGAAAGGCTTTCAATGGCACATTCATAGCCGCTGGGGG
TTATGTGAAAGAAGACGGAAACAATGCTGTGGCTGAGGAGCGTGCAGATCTTGTTGCATT
TGGACGTTGGTTCTTAGCCAACCCAGATCTTCCAGAAAGATTTGCGCTCAATGCTCCTCT
CAACAAGTATAACAGGGAGACATTCTACGCACCCGAACCCATAATCGGCTACACTGATTA
TCCATTTCTTGAGGATATTGTTGAGTAG