Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g02020.t01
CDS Infomation

cds chromosome:12X:18:27135205:27137890:1 gene:VIT_18s0041g02020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGGGAAAGTACAAAGAATAAATGGCGTCTCTGCTGAAACCCCCATCCCTCTTATC
ACTCCATACAAGTTGGGCAAGCTCCAGCTCTCTCACAGGGTTGTTCTAGCACCATTAACC
AGGCAGAGATCTTGGAACAATGTTCCTCAACCACATGCTATCTTACATTACTCTCAAAGA
ACCAGCAAAGGGGGTCTTCTCATAGCTGAAGCAACGGGAGTTTCGGACACTGCTCAAGGG
TATCCACATACACCAGGCATATGGACAAAAGAACAAGTTGAAGCATGGAAACCTATTGTA
GATGCTGTACATGCTAAAGGCGGTATCTTTTTTTGTCAGATTTGGCATGTGGGGAGGGTT
TCAAACACGGATTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTG
ACACCCCAAATCCGAGGCAATGGCATTGGTGTTGACCAGTTCTCACCTCCCCGGCGGCTA
ACAACAGATGAAATCCCTCAAGTTGTAAAGGATTTTAGACTTGCTGCAAGGAACGCTATT
GAAGCTGGTTTTGATGGAGTCGAGATCCATGGGGCTCATGGCTACCTACTTGACCAGTTC
ATGAAAGACCAGGTCAATGATCGAACTGACAAATATGGTGGATCCCTAGAGAACAGATGC
CGGTTTGCTTTGGAAGTAGTTGAAGCTGTTGTTGATGAGATAGGCGCAGACAAAGTTGGA
ATCAAGCTTTCTCCATATGATGCTTTTGGAGAAGCAGAAGACTCGAATCCAAAAGCTCTA
GGCCTTTACATGGCTGAATCCTTGAATAAATACGGGCTTCTCTACTGCCACATGGTTGAA
CCAAGGATGGAAACACTCGGAGAAAAAAGTGAATGCGCCCATAGTCTTTTGCCCATGAGA
AAAGCTTTCAATGGTACGTTCCTTGTTACTGGGGGGTATGACAGAGAAGATGGGAACAAC
GTTGTGGCAGAGAATCGCGCAGATCTTGTTGTGTATGGGCGTTGGTTCTTGGCCAACCCA
GATCTTCCAAAGAGATTTGCGCTCAATGCTCCTCTCAACAAGTACAACAGAGAAACATTC
TATACACCCGATCCTATTGTTGGTTATAACGATTATCCATTTCTTGAAGATACCGAGTAG

Peptide Sequence

PEP ID

VIT_18s0041g02020.t01
PEP Infomation

pep chromosome:12X:18:27135205:27137890:1 gene:VIT_18s0041g02020 transcript:VIT_18s0041g02020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGKVQRINGVSAETPIPLITPYKLGKLQLSHRVVLAPLTRQRSWNNVPQPHAILHYSQR
TSKGGLLIAEATGVSDTAQGYPHTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRV
SNTDFQPNGQAPISCTDKPLTPQIRGNGIGVDQFSPPRRLTTDEIPQVVKDFRLAARNAI
EAGFDGVEIHGAHGYLLDQFMKDQVNDRTDKYGGSLENRCRFALEVVEAVVDEIGADKVG
IKLSPYDAFGEAEDSNPKALGLYMAESLNKYGLLYCHMVEPRMETLGEKSECAHSLLPMR
KAFNGTFLVTGGYDREDGNNVVAENRADLVVYGRWFLANPDLPKRFALNAPLNKYNRETF
YTPDPIVGYNDYPFLEDTE

Transcript Sequence

Transcript ID

VIT_18s0041g02020.t01
Transcript Infomation

cdna chromosome:12X:18:27135205:27137890:1 gene:VIT_18s0041g02020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGATTCCTTCAACGATTATTTTCCAGGAAAAGAAAAGAAAGAGAGAAACCAAACACTGA
TGGACGGGAAAGTACAAAGAATAAATGGCGTCTCTGCTGAAACCCCCATCCCTCTTATCA
CTCCATACAAGTTGGGCAAGCTCCAGCTCTCTCACAGGGTTGTTCTAGCACCATTAACCA
GGCAGAGATCTTGGAACAATGTTCCTCAACCACATGCTATCTTACATTACTCTCAAAGAA
CCAGCAAAGGGGGTCTTCTCATAGCTGAAGCAACGGGAGTTTCGGACACTGCTCAAGGGT
ATCCACATACACCAGGCATATGGACAAAAGAACAAGTTGAAGCATGGAAACCTATTGTAG
ATGCTGTACATGCTAAAGGCGGTATCTTTTTTTGTCAGATTTGGCATGTGGGGAGGGTTT
CAAACACGGATTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTGA
CACCCCAAATCCGAGGCAATGGCATTGGTGTTGACCAGTTCTCACCTCCCCGGCGGCTAA
CAACAGATGAAATCCCTCAAGTTGTAAAGGATTTTAGACTTGCTGCAAGGAACGCTATTG
AAGCTGGTTTTGATGGAGTCGAGATCCATGGGGCTCATGGCTACCTACTTGACCAGTTCA
TGAAAGACCAGGTCAATGATCGAACTGACAAATATGGTGGATCCCTAGAGAACAGATGCC
GGTTTGCTTTGGAAGTAGTTGAAGCTGTTGTTGATGAGATAGGCGCAGACAAAGTTGGAA
TCAAGCTTTCTCCATATGATGCTTTTGGAGAAGCAGAAGACTCGAATCCAAAAGCTCTAG
GCCTTTACATGGCTGAATCCTTGAATAAATACGGGCTTCTCTACTGCCACATGGTTGAAC
CAAGGATGGAAACACTCGGAGAAAAAAGTGAATGCGCCCATAGTCTTTTGCCCATGAGAA
AAGCTTTCAATGGTACGTTCCTTGTTACTGGGGGGTATGACAGAGAAGATGGGAACAACG
TTGTGGCAGAGAATCGCGCAGATCTTGTTGTGTATGGGCGTTGGTTCTTGGCCAACCCAG
ATCTTCCAAAGAGATTTGCGCTCAATGCTCCTCTCAACAAGTACAACAGAGAAACATTCT
ATACACCCGATCCTATTGTTGGTTATAACGATTATCCATTTCTTGAAGATACCGAGTAGA
TTCTCATAGGTGTAGGATTAGAACTTGAATTATTTTTCAGTGATATAAATAGTTTCCATA
CTTGTTATTTTCTTTTGTCCCTTTCAGATAGTTTCCACGTTATTGTAAGAATATAGAATT
CATTGATTCAAGGACTATCCTGCATGATAATAAAGGGATTAATT