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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g01880.t01
CDS Infomation

cds chromosome:12X:18:26888672:26896521:-1 gene:VIT_18s0041g01880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Agamous like-protein 11 [Source:UniProtKB/TrEMBL;Acc:F6I457]
Sequence

ATGGGGAGAGGAAAGATCGAGATCAAGAGGATCGAAAACACGACCAACCGTCAGGTCACA
TTCTGCAAGCGAAGGAATGGGCTTTTGAAGAAGGCTTATGAATTATCAGTGCTATGTGAT
GCAGAAGTTGCCCTCATCGTCTTCTCCAGCCGCGGTCGAGTCTATGAGTACTCAAACAAC
AACATAAAATCAACCATAGATAGGTACAAGAAGGCCAGCTCAGATAGTACAAATGGAGGC
TCTACCATGGAGATCAATGCCCAATACTACCAGCAAGAATCAGCAAAGCTGCGCCAGCAA
ATACAGATGCTGCAGAATTCTAACAGGCACTTAATGGGTGATTCCTTGGCTTCCTTGACT
GTGAAGGAGCTAAAGCAGCTCGAGAACAGGCTTGAACGAGGCATCACAAGAATCAGGTCG
AAGAAGCATGAGTTGCTGTTGGCTGAGATTGAGTACTTGCAGAAAAGGGAAATTGAGCTG
GAAAATGAAAGCGTATATCTCCGAACCAAGATTGCAGAAGTGGAGAGGCTTCAGCAAGCA
AACATGGTATCAACACATGAGTTCAATGCCATCCAGGCATTAGTTTCTCGCAATTTCTTT
CAGCCCAATATGATTGAGGGTGGATCCACAGGCTACCCACTTCCTGATAAGAAGGTCCTC
CATCTCGGGTAA

Peptide Sequence

PEP ID

VIT_18s0041g01880.t01
PEP Infomation

pep chromosome:12X:18:26888672:26896521:-1 gene:VIT_18s0041g01880 transcript:VIT_18s0041g01880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Agamous like-protein 11 [Source:UniProtKB/TrEMBL;Acc:F6I457]
Sequence

MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN
NIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASLT
VKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVYLRTKIAEVERLQQA
NMVSTHEFNAIQALVSRNFFQPNMIEGGSTGYPLPDKKVLHLG

Transcript Sequence

Transcript ID

VIT_18s0041g01880.t01
Transcript Infomation

cdna chromosome:12X:18:26888672:26896521:-1 gene:VIT_18s0041g01880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Agamous like-protein 11 [Source:UniProtKB/TrEMBL;Acc:F6I457]
Sequence

TTTTGCACAGCCCGAAATTTTCCGAAAGCTGAAGTCGCCGGATTTTGGAAACAAGTGTAG
TGAACATGGGGAGAGGAAAGATCGAGATCAAGAGGATCGAAAACACGACCAACCGTCAGG
TCACATTCTGCAAGCGAAGGAATGGGCTTTTGAAGAAGGCTTATGAATTATCAGTGCTAT
GTGATGCAGAAGTTGCCCTCATCGTCTTCTCCAGCCGCGGTCGAGTCTATGAGTACTCAA
ACAACAACATAAAATCAACCATAGATAGGTACAAGAAGGCCAGCTCAGATAGTACAAATG
GAGGCTCTACCATGGAGATCAATGCCCAATACTACCAGCAAGAATCAGCAAAGCTGCGCC
AGCAAATACAGATGCTGCAGAATTCTAACAGGCACTTAATGGGTGATTCCTTGGCTTCCT
TGACTGTGAAGGAGCTAAAGCAGCTCGAGAACAGGCTTGAACGAGGCATCACAAGAATCA
GGTCGAAGAAGCATGAGTTGCTGTTGGCTGAGATTGAGTACTTGCAGAAAAGGGAAATTG
AGCTGGAAAATGAAAGCGTATATCTCCGAACCAAGATTGCAGAAGTGGAGAGGCTTCAGC
AAGCAAACATGGTATCAACACATGAGTTCAATGCCATCCAGGCATTAGTTTCTCGCAATT
TCTTTCAGCCCAATATGATTGAGGGTGGATCCACAGGCTACCCACTTCCTGATAAGAAGG
TCCTCCATCTCGGGTAAATGATGGGAGAAAATATCCGCCAACTTCATCTCCTTATGATGT
TTAAATAAATCTTTTCCCATGCTATCCAAACTGTTATGTAACGGAGAATTAATGTCATTG
TTGTATTTGGGGTTTCTATGACTTGGTATTTATCCGCTAGCAACCAGTACTGTTTTGTAT
AACATTATGATATATAATATAGCCTATTAAAATATACAATA