Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g01140.t01
CDS Infomation

cds chromosome:12X:18:25769243:25771054:1 gene:VIT_18s0041g01140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGTTCAGAGATAGCTGTGAATGCCATCCAAGTTACACATGATGTTTCTGGAAGTCCT
ATTACAAATTTGTCTGGCCAGGCCCTGTATAAAAGGCCATTCAAGCTGTGGAGTGAAAGC
AAAGGCACAGCATCCTTCAATACGACCTTTGTGTTCAGAATCACTCCGAGGACAGATCCA
GGTGGTGAAGGCTTGGCCTTTATCTTAACTGGGCATGCCACTCGTCCAGAGAACAGTGAA
GGGAAATGGCTTGGGATTGTGAATGCAAGCACAAATGGATCAGCTCAAAACCAGATAGTG
GCAGTAGAATTTGACACCAGGAAAAGCTACATGGAGGACTTGAGCAACAACCACATTGGC
GTGAACGTGAACAGCGTCTACTCAATCAAACAAGCGAATCTAAGCATCAATCTTTCAAGT
GGCACCGATATAACAGTGAAGGTTCAATATGATGGGAAAATTTTGAGTGCCTTTGTTGGA
ACGCAGATGAAGGCTCCAGCAATCGCTCTTCCTATTAACCTCCCAGAACATCTGCCACAG
AAAGTTTTTGTGGGATTCTCGGCTTCAACGGGGAATCACACTCAACTGAACTGTGTAAGC
TCATGGGAATTCAGTGGTTTGAGTGTAGATGAAGATCCTGACTTGTTATGGGTCTGGATC
ATGGTTCCAGTAACAGTTTTGGTTAGTGGGGTTGCCTTCTATTTCTCTTGGAAATGCAAA
TGTGCAAAGCAGGAGGAAGAGGAGGATGATCCGTGGGTAGAACAACAGATTCAAGGCTCA
TCCACAGCTCCAAGGAAATTTCGACTGAAAGAACTTAAAACTGCTACAGAAAATTTCAAC
TCCAAGAATGAGCTTGGCAAAGGTGGATTTGGGAGAGTCTACAAAGGATTCTTGAAGAAT
AAGGAGGTAGCTGTGAAAAGATTTTCAAGGAATTCCCATCAAAGCAAGCAAGATTTTATA
GCAGAAGTCACAACAATCAGCAATCTACATCACAAAAATCTTGTCAAATTAGTTGGATGG
TGCTATGAAAAAAGGGAACTCCTTCTAATATATGAGTTCATGCCAAATACGAGCCTAGAC
AAGCTCATATTCTATAAAAAATCCGACGAGGAGAATCCAATCACACTGAATTGGGAAACA
AGATATGGAATCATTTGCGGGGTGGCTCAGGCATTGGACTATCTTCACAATGGATGCGAG
AAGAGGGTGCTTCACCGAGACATAAAAGCGAGCAATATAATGTTGGATTCAGATTTCAAT
GCCCGGTTGGGAGATTTTGGACTGGCTAGAATTATTCAACAGAGTGATTACACTCACCAC
TCAACAAAAGAGATTGCAGGGACACCTGGGTATATGGCTCCAGAAAGTTTTCATACTGGT
AGGGCTGCCGTTGAAACCGATGTATATGCCTTCGGTGTTCTTGTACTGGAAGTTGTCTGT
GGAAGAAAGCCTGGAGATCAAAGCGTGAACAACAAATACAACAACGGGATAGTGGATTGG
GTATGGGAATACTATAGGAGACAAAGGATTCTGGATGTCGTAGATTTGCGACTGAATGGG
GTTTTCCGCAAGGAGCAGACTGAATATGCACTGATGTTGGCATTGTCCTGTTGTCATCCC
AACCCATACCAGAGGCCATCCATGAGAATTTCTTTAAGGGTTCTTACAGGAGAGGTGGAC
CCACCAGTTATCCCCATTGAAAAACCTCCTTTTGTGTGGCCGGCCACACCTCCGGTCTCT
TTCAGGGAGGATTTGGAATATCCTCCCACAGGAGGCCTGCTCTCTCCACCTTCAGAACTC
ATTGGGAGATAA

Peptide Sequence

PEP ID

VIT_18s0041g01140.t01
PEP Infomation

pep chromosome:12X:18:25769243:25771054:1 gene:VIT_18s0041g01140 transcript:VIT_18s0041g01140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRSEIAVNAIQVTHDVSGSPITNLSGQALYKRPFKLWSESKGTASFNTTFVFRITPRTDP
GGEGLAFILTGHATRPENSEGKWLGIVNASTNGSAQNQIVAVEFDTRKSYMEDLSNNHIG
VNVNSVYSIKQANLSINLSSGTDITVKVQYDGKILSAFVGTQMKAPAIALPINLPEHLPQ
KVFVGFSASTGNHTQLNCVSSWEFSGLSVDEDPDLLWVWIMVPVTVLVSGVAFYFSWKCK
CAKQEEEEDDPWVEQQIQGSSTAPRKFRLKELKTATENFNSKNELGKGGFGRVYKGFLKN
KEVAVKRFSRNSHQSKQDFIAEVTTISNLHHKNLVKLVGWCYEKRELLLIYEFMPNTSLD
KLIFYKKSDEENPITLNWETRYGIICGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDFN
ARLGDFGLARIIQQSDYTHHSTKEIAGTPGYMAPESFHTGRAAVETDVYAFGVLVLEVVC
GRKPGDQSVNNKYNNGIVDWVWEYYRRQRILDVVDLRLNGVFRKEQTEYALMLALSCCHP
NPYQRPSMRISLRVLTGEVDPPVIPIEKPPFVWPATPPVSFREDLEYPPTGGLLSPPSEL
IGR

Transcript Sequence

Transcript ID

VIT_18s0041g01140.t01
Transcript Infomation

cdna chromosome:12X:18:25769243:25771054:1 gene:VIT_18s0041g01140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGTTCAGAGATAGCTGTGAATGCCATCCAAGTTACACATGATGTTTCTGGAAGTCCT
ATTACAAATTTGTCTGGCCAGGCCCTGTATAAAAGGCCATTCAAGCTGTGGAGTGAAAGC
AAAGGCACAGCATCCTTCAATACGACCTTTGTGTTCAGAATCACTCCGAGGACAGATCCA
GGTGGTGAAGGCTTGGCCTTTATCTTAACTGGGCATGCCACTCGTCCAGAGAACAGTGAA
GGGAAATGGCTTGGGATTGTGAATGCAAGCACAAATGGATCAGCTCAAAACCAGATAGTG
GCAGTAGAATTTGACACCAGGAAAAGCTACATGGAGGACTTGAGCAACAACCACATTGGC
GTGAACGTGAACAGCGTCTACTCAATCAAACAAGCGAATCTAAGCATCAATCTTTCAAGT
GGCACCGATATAACAGTGAAGGTTCAATATGATGGGAAAATTTTGAGTGCCTTTGTTGGA
ACGCAGATGAAGGCTCCAGCAATCGCTCTTCCTATTAACCTCCCAGAACATCTGCCACAG
AAAGTTTTTGTGGGATTCTCGGCTTCAACGGGGAATCACACTCAACTGAACTGTGTAAGC
TCATGGGAATTCAGTGGTTTGAGTGTAGATGAAGATCCTGACTTGTTATGGGTCTGGATC
ATGGTTCCAGTAACAGTTTTGGTTAGTGGGGTTGCCTTCTATTTCTCTTGGAAATGCAAA
TGTGCAAAGCAGGAGGAAGAGGAGGATGATCCGTGGGTAGAACAACAGATTCAAGGCTCA
TCCACAGCTCCAAGGAAATTTCGACTGAAAGAACTTAAAACTGCTACAGAAAATTTCAAC
TCCAAGAATGAGCTTGGCAAAGGTGGATTTGGGAGAGTCTACAAAGGATTCTTGAAGAAT
AAGGAGGTAGCTGTGAAAAGATTTTCAAGGAATTCCCATCAAAGCAAGCAAGATTTTATA
GCAGAAGTCACAACAATCAGCAATCTACATCACAAAAATCTTGTCAAATTAGTTGGATGG
TGCTATGAAAAAAGGGAACTCCTTCTAATATATGAGTTCATGCCAAATACGAGCCTAGAC
AAGCTCATATTCTATAAAAAATCCGACGAGGAGAATCCAATCACACTGAATTGGGAAACA
AGATATGGAATCATTTGCGGGGTGGCTCAGGCATTGGACTATCTTCACAATGGATGCGAG
AAGAGGGTGCTTCACCGAGACATAAAAGCGAGCAATATAATGTTGGATTCAGATTTCAAT
GCCCGGTTGGGAGATTTTGGACTGGCTAGAATTATTCAACAGAGTGATTACACTCACCAC
TCAACAAAAGAGATTGCAGGGACACCTGGGTATATGGCTCCAGAAAGTTTTCATACTGGT
AGGGCTGCCGTTGAAACCGATGTATATGCCTTCGGTGTTCTTGTACTGGAAGTTGTCTGT
GGAAGAAAGCCTGGAGATCAAAGCGTGAACAACAAATACAACAACGGGATAGTGGATTGG
GTATGGGAATACTATAGGAGACAAAGGATTCTGGATGTCGTAGATTTGCGACTGAATGGG
GTTTTCCGCAAGGAGCAGACTGAATATGCACTGATGTTGGCATTGTCCTGTTGTCATCCC
AACCCATACCAGAGGCCATCCATGAGAATTTCTTTAAGGGTTCTTACAGGAGAGGTGGAC
CCACCAGTTATCCCCATTGAAAAACCTCCTTTTGTGTGGCCGGCCACACCTCCGGTCTCT
TTCAGGGAGGATTTGGAATATCCTCCCACAGGAGGCCTGCTCTCTCCACCTTCAGAACTC
ATTGGGAGATAA