Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g00650.t01
CDS Infomation

cds chromosome:12X:18:25134514:25139348:-1 gene:VIT_18s0041g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTACTCTTCGATCTCCGGCGGCACGGAGACCCCACTACTTGACGACACCGTCGAC
GGTTTCGCCGACCACAAGGGCCGTCCAGCGAGGAGATCGAGCTCCGGCGGGTGGCGATCC
GCGTCCTTCATCATCGGAGTCGAGGTTGCGGAGAGGTTCGCCTACTACGGCATAGGGTCC
AACCTCATAAGCTTCCTTATCGGGCCACTGGGCCAGTCTACCGCCGCCGCCGCCGCCAAC
GTCAACACATGGTCCGGCACCTCCACGTTGCTGCCGCTGTTGGGAGCTTTTGTGGCGGAC
ACGTATCTCGGCCGCTATTACACCATCATTGTTGCTTCCCTTATCTACATACTGGGGCTA
GGCTTGTTAGCAGTATCTGCTGTGCTTCCTTCTGCGAGCCCTTCTGAATGCCAAAAAAAT
GATGAAATCGCTTCTTGTTCTCCTCCTCAGCTACAAGTAATCCTCTTCTTTTTCGCTCTA
TATCTTGTAGCAGTTGGGCAAGGTGGGCACAAGCCCTGTGTCCAGGCTTTTGGAGCTGAC
CAGTTTGATGGACAAGATCCAGTGGAGGGCAAATCCAAAAGCTCATTCTTCAACTGGTGG
TACTTCTCTATGTGCTTTGGTACTCTAATAACTCTCTTCATCTTGAACTACATTCAAGAC
AACCTGAATTGGGGTCTTGGATTTGGAATCCCCTGTATTGCCATGGTGATTGCACTACTT
GTTTTCTTGCTTGGGACCAAGACATACCGGTATAGTGTCAATGGAGATGAGAAAAGCCCA
TTTGTGAGGATTGGTCAGGTGTTTGTTGCAGCAGCTAGAAATTGGAGGACAACTGATTCG
TCTCTAAATTTTGAAGAGGTAGCTCGAGGAACCCTACCTCACCAAGGTTCTCTGCAGTTC
AGGTTTCTTAACAAGGCCTTGCTTGCACCGGATGGTTCCAAGGACAATGGCAAGGTGTGT
AGTGTCAGTGATGTTGAAGAAGCAAAGGCGGTTCTGAGGCTCTTTCCCATATGGGCTACG
TGTTTGGCCTACGCTATTGTGTTTGCACAGTCATCGACTTTCTTTACCAAGCAAGGAATT
ACTATGGATCGATCACTCGGATCAGGGTTTGTGATACCAGCAGCTTCACTTCAGTCCTTT
ATCACCCTTGCCATTATCATCTTCATCCCCATATACGATCGCATTTTTGTTCCCATTGCA
AGATCATTAACCAGGAAACCATCTGGCATAACAATGCTTCAGAGGATCGGAACTGGGATT
TTCTTATCTTGCATCTCCATGGTAATTGCAGCCCTGGTTGAGATGAAACGGCTCAAAACC
GCTGAAGAATACGGATTGATTGATATGCCAAAGGTGACGGTTCCAATGAGCGTGTGCTGG
TTGATTCCCCAATACATCTTGTTTGGAGTTTCGGACGTGTTCACCATGGTTGGTCTGCAG
GAGTTTTTCTATGATCAGGTCCCAAATGAATTAAGGAGTGTCGGCCTCGCCCTCTACCTC
AGTATCTTCGGTGTAGGGAACTTCCTGAGCAGTTTTCTCATCTCTGTCATCGACAAAACA
ACTAATGGAGATGGCCAAGGTAGCTGGTTCAATGATAATCTTAATCAGGCACATCTTGAT
TACTTCTACTGGCTGCTGGCCGGGCTCAGTGCAGTTGGGTTGGCTACCTACTTGTATTTT
GCAAAATCCTATATTTATAATAGGGGAAATACAACAACAAATAAAATAGAAAAACACATT
TGA

Peptide Sequence

PEP ID

VIT_18s0041g00650.t01
PEP Infomation

pep chromosome:12X:18:25134514:25139348:-1 gene:VIT_18s0041g00650 transcript:VIT_18s0041g00650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAYSSISGGTETPLLDDTVDGFADHKGRPARRSSSGGWRSASFIIGVEVAERFAYYGIGS
NLISFLIGPLGQSTAAAAANVNTWSGTSTLLPLLGAFVADTYLGRYYTIIVASLIYILGL
GLLAVSAVLPSASPSECQKNDEIASCSPPQLQVILFFFALYLVAVGQGGHKPCVQAFGAD
QFDGQDPVEGKSKSSFFNWWYFSMCFGTLITLFILNYIQDNLNWGLGFGIPCIAMVIALL
VFLLGTKTYRYSVNGDEKSPFVRIGQVFVAAARNWRTTDSSLNFEEVARGTLPHQGSLQF
RFLNKALLAPDGSKDNGKVCSVSDVEEAKAVLRLFPIWATCLAYAIVFAQSSTFFTKQGI
TMDRSLGSGFVIPAASLQSFITLAIIIFIPIYDRIFVPIARSLTRKPSGITMLQRIGTGI
FLSCISMVIAALVEMKRLKTAEEYGLIDMPKVTVPMSVCWLIPQYILFGVSDVFTMVGLQ
EFFYDQVPNELRSVGLALYLSIFGVGNFLSSFLISVIDKTTNGDGQGSWFNDNLNQAHLD
YFYWLLAGLSAVGLATYLYFAKSYIYNRGNTTTNKIEKHI

Transcript Sequence

Transcript ID

VIT_18s0041g00650.t01
Transcript Infomation

cdna chromosome:12X:18:25134514:25139348:-1 gene:VIT_18s0041g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCTAGAAAACTACTGCAGAAATCGTGTAATAAAAGGATAATAATCTCCTCTCGGAAGAT
TCCTAAATTCTGTGGCTGTCGATCGCCGACCCATGGCCTACTCTTCGATCTCCGGCGGCA
CGGAGACCCCACTACTTGACGACACCGTCGACGGTTTCGCCGACCACAAGGGCCGTCCAG
CGAGGAGATCGAGCTCCGGCGGGTGGCGATCCGCGTCCTTCATCATCGGAGTCGAGGTTG
CGGAGAGGTTCGCCTACTACGGCATAGGGTCCAACCTCATAAGCTTCCTTATCGGGCCAC
TGGGCCAGTCTACCGCCGCCGCCGCCGCCAACGTCAACACATGGTCCGGCACCTCCACGT
TGCTGCCGCTGTTGGGAGCTTTTGTGGCGGACACGTATCTCGGCCGCTATTACACCATCA
TTGTTGCTTCCCTTATCTACATACTGGGGCTAGGCTTGTTAGCAGTATCTGCTGTGCTTC
CTTCTGCGAGCCCTTCTGAATGCCAAAAAAATGATGAAATCGCTTCTTGTTCTCCTCCTC
AGCTACAAGTAATCCTCTTCTTTTTCGCTCTATATCTTGTAGCAGTTGGGCAAGGTGGGC
ACAAGCCCTGTGTCCAGGCTTTTGGAGCTGACCAGTTTGATGGACAAGATCCAGTGGAGG
GCAAATCCAAAAGCTCATTCTTCAACTGGTGGTACTTCTCTATGTGCTTTGGTACTCTAA
TAACTCTCTTCATCTTGAACTACATTCAAGACAACCTGAATTGGGGTCTTGGATTTGGAA
TCCCCTGTATTGCCATGGTGATTGCACTACTTGTTTTCTTGCTTGGGACCAAGACATACC
GGTATAGTGTCAATGGAGATGAGAAAAGCCCATTTGTGAGGATTGGTCAGGTGTTTGTTG
CAGCAGCTAGAAATTGGAGGACAACTGATTCGTCTCTAAATTTTGAAGAGGTAGCTCGAG
GAACCCTACCTCACCAAGGTTCTCTGCAGTTCAGGTTTCTTAACAAGGCCTTGCTTGCAC
CGGATGGTTCCAAGGACAATGGCAAGGTGTGTAGTGTCAGTGATGTTGAAGAAGCAAAGG
CGGTTCTGAGGCTCTTTCCCATATGGGCTACGTGTTTGGCCTACGCTATTGTGTTTGCAC
AGTCATCGACTTTCTTTACCAAGCAAGGAATTACTATGGATCGATCACTCGGATCAGGGT
TTGTGATACCAGCAGCTTCACTTCAGTCCTTTATCACCCTTGCCATTATCATCTTCATCC
CCATATACGATCGCATTTTTGTTCCCATTGCAAGATCATTAACCAGGAAACCATCTGGCA
TAACAATGCTTCAGAGGATCGGAACTGGGATTTTCTTATCTTGCATCTCCATGGTAATTG
CAGCCCTGGTTGAGATGAAACGGCTCAAAACCGCTGAAGAATACGGATTGATTGATATGC
CAAAGGTGACGGTTCCAATGAGCGTGTGCTGGTTGATTCCCCAATACATCTTGTTTGGAG
TTTCGGACGTGTTCACCATGGTTGGTCTGCAGGAGTTTTTCTATGATCAGGTCCCAAATG
AATTAAGGAGTGTCGGCCTCGCCCTCTACCTCAGTATCTTCGGTGTAGGGAACTTCCTGA
GCAGTTTTCTCATCTCTGTCATCGACAAAACAACTAATGGAGATGGCCAAGGTAGCTGGT
TCAATGATAATCTTAATCAGGCACATCTTGATTACTTCTACTGGCTGCTGGCCGGGCTCA
GTGCAGTTGGGTTGGCTACCTACTTGTATTTTGCAAAATCCTATATTTATAATAGGGGAA
ATACAACAACAAATAAAATAGAAAAACACATTTGA