Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g00520.t01
CDS Infomation

cds chromosome:12X:18:24964693:24968424:-1 gene:VIT_18s0041g00520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCATAGCTGGAACTCCCGGAGGACCCGAATCTCCGCTGCTGGAAGACATCGTCGAT
GGCTACACCGATCACAAAGGCCGTCCAGCCAGGAGATCCACCTCAGGCTGTTGGAGATCT
GCGTACTTCATCATAGGTGTTGAAGTTGCAGAGAGGTTTGCATACTCTGGCATACAAGCC
AATCTTATAAACTATCTTACGGGTCGATTAGGGCTGTCCATGGCCACTGCTGCCGAGAAT
GTGAATACATGGTCAGGGACAGGGGGTTTACTGCCCTTAGTAGGAGCATTCGTTGCAGAT
TCTTATCTTGGCCGATATCGAACCATCATTATTGCTTCTTTTCTTTACATCCTGGGACTA
GGGTTGTTAACACTGTCTGCTGTGCTTCCGTCTCCCAGCCCTTCTGACTGCCAAAAAAGC
AACCAAATCACATCATGTTCTCCTCCTCAGCTCCAAATAATCCTCTTCTTTTTCTCATTG
TATTTAGTGGCAGTAGGGCAAGGTGGGCACAAGCCTTGCAACCAGGCATTTGGAGCCGAC
CAATTTGATGGACGAAATCCAGAGGAATGCAAAGCCAAAAGCTCATTTTTCAACTGGTGG
TATTTTGGTCTTTGCTTTGGTACTGTAATAAATTACTCTGTCTTGAGCTACATTCAAGAG
AACTTGAATTGGGGTCTTGGATTTGGAATTCCATGCGTTGTCATGATAGCGGCACTGCTC
CTTTTCTTGCTTGGGACTAGGACTTATCGATATAGTGTCAAAACGGATGAGAAAAGCCCA
TTTGTGAGAATTGGTAAGGTGTTTATTGCAGCAGCTAAGAATTGGCGAACAATGCCTTCA
TTGGTAGCTACAGAAGAGTTAGCTAGAGAAGCCCCACATCACCAGGTTTCTCAACAATTC
AAGTGCTTGAACAAGGCGTTGCTTGCACCAGATGGTTCCAAAGGAAATGGAAGGCAGTGT
ACCATTGATAATGTTGAAGAAGCAAAGGCAGTTTTAAGACTGTTTCCCATATGGACTACT
TGTCTGGTGTATGCTATTGCGTTTGCACAGTCATCTACTTTCTTTACCAAGCAAGGAATC
ACCATGGACAGATCGATTGGATGGGGGATTGACATACCAGCTTCTTCACTTCAAGGCTTT
ATCGGCCTCTCCATTGTCCTCATTGTCCCCATATATGACCGCATCTTGGTTCCTATTGCA
AGAACCTTAACTAGGAAGCCATCTGGCATAACAATGCTTCAGAGGATCGGAACAGGCATG
TTTCTGTCCGCCATTTCCATGGTAGTTGCAGCGCTAGTTGAGATGAAACGGCTAAAAACA
GCTCAAGAACATGGGCTGGTTGATATGCCAAACGTGACTCTTCCAATGAGTGTATGGTGG
TTGCTTCCCCAATACATCTTGTTTGGAGTTTCTGATGTGGTCACCATAGTTGGTCTTCAA
GAGTTTTTCTATGATCAAGTCCCAACCGAATTAAGGAGTGTCGGTATCGCCCTCTACCTC
AGTATCTTAGGTGTAGGGAACTTCCTGAGCAGCTTTCTTATCTCTGCAATTGAAAAAGCA
ACTGGTGGAGATGGCCAACATAGCTGGTTCAACGATAATCTCAATCGGGCACATCTCGAT
AACTATTATTGGGTTCTTGCAGGGCTGAGTGCAGTAGGATTGAGTTTATACCTGTATTTT
GCAAAGTCTTACATATACAATAGGGGAAGTACATTATGA

Peptide Sequence

PEP ID

VIT_18s0041g00520.t01
PEP Infomation

pep chromosome:12X:18:24964693:24968424:-1 gene:VIT_18s0041g00520 transcript:VIT_18s0041g00520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTIAGTPGGPESPLLEDIVDGYTDHKGRPARRSTSGCWRSAYFIIGVEVAERFAYSGIQA
NLINYLTGRLGLSMATAAENVNTWSGTGGLLPLVGAFVADSYLGRYRTIIIASFLYILGL
GLLTLSAVLPSPSPSDCQKSNQITSCSPPQLQIILFFFSLYLVAVGQGGHKPCNQAFGAD
QFDGRNPEECKAKSSFFNWWYFGLCFGTVINYSVLSYIQENLNWGLGFGIPCVVMIAALL
LFLLGTRTYRYSVKTDEKSPFVRIGKVFIAAAKNWRTMPSLVATEELAREAPHHQVSQQF
KCLNKALLAPDGSKGNGRQCTIDNVEEAKAVLRLFPIWTTCLVYAIAFAQSSTFFTKQGI
TMDRSIGWGIDIPASSLQGFIGLSIVLIVPIYDRILVPIARTLTRKPSGITMLQRIGTGM
FLSAISMVVAALVEMKRLKTAQEHGLVDMPNVTLPMSVWWLLPQYILFGVSDVVTIVGLQ
EFFYDQVPTELRSVGIALYLSILGVGNFLSSFLISAIEKATGGDGQHSWFNDNLNRAHLD
NYYWVLAGLSAVGLSLYLYFAKSYIYNRGSTL

Transcript Sequence

Transcript ID

VIT_18s0041g00520.t01
Transcript Infomation

cdna chromosome:12X:18:24964693:24968424:-1 gene:VIT_18s0041g00520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCCCCCAGAAACATGACCATAGCTGGAACTCCCGGAGGACCCGAATCTCCGCTGCTGGA
AGACATCGTCGATGGCTACACCGATCACAAAGGCCGTCCAGCCAGGAGATCCACCTCAGG
CTGTTGGAGATCTGCGTACTTCATCATAGGTGTTGAAGTTGCAGAGAGGTTTGCATACTC
TGGCATACAAGCCAATCTTATAAACTATCTTACGGGTCGATTAGGGCTGTCCATGGCCAC
TGCTGCCGAGAATGTGAATACATGGTCAGGGACAGGGGGTTTACTGCCCTTAGTAGGAGC
ATTCGTTGCAGATTCTTATCTTGGCCGATATCGAACCATCATTATTGCTTCTTTTCTTTA
CATCCTGGGACTAGGGTTGTTAACACTGTCTGCTGTGCTTCCGTCTCCCAGCCCTTCTGA
CTGCCAAAAAAGCAACCAAATCACATCATGTTCTCCTCCTCAGCTCCAAATAATCCTCTT
CTTTTTCTCATTGTATTTAGTGGCAGTAGGGCAAGGTGGGCACAAGCCTTGCAACCAGGC
ATTTGGAGCCGACCAATTTGATGGACGAAATCCAGAGGAATGCAAAGCCAAAAGCTCATT
TTTCAACTGGTGGTATTTTGGTCTTTGCTTTGGTACTGTAATAAATTACTCTGTCTTGAG
CTACATTCAAGAGAACTTGAATTGGGGTCTTGGATTTGGAATTCCATGCGTTGTCATGAT
AGCGGCACTGCTCCTTTTCTTGCTTGGGACTAGGACTTATCGATATAGTGTCAAAACGGA
TGAGAAAAGCCCATTTGTGAGAATTGGTAAGGTGTTTATTGCAGCAGCTAAGAATTGGCG
AACAATGCCTTCATTGGTAGCTACAGAAGAGTTAGCTAGAGAAGCCCCACATCACCAGGT
TTCTCAACAATTCAAGTGCTTGAACAAGGCGTTGCTTGCACCAGATGGTTCCAAAGGAAA
TGGAAGGCAGTGTACCATTGATAATGTTGAAGAAGCAAAGGCAGTTTTAAGACTGTTTCC
CATATGGACTACTTGTCTGGTGTATGCTATTGCGTTTGCACAGTCATCTACTTTCTTTAC
CAAGCAAGGAATCACCATGGACAGATCGATTGGATGGGGGATTGACATACCAGCTTCTTC
ACTTCAAGGCTTTATCGGCCTCTCCATTGTCCTCATTGTCCCCATATATGACCGCATCTT
GGTTCCTATTGCAAGAACCTTAACTAGGAAGCCATCTGGCATAACAATGCTTCAGAGGAT
CGGAACAGGCATGTTTCTGTCCGCCATTTCCATGGTAGTTGCAGCGCTAGTTGAGATGAA
ACGGCTAAAAACAGCTCAAGAACATGGGCTGGTTGATATGCCAAACGTGACTCTTCCAAT
GAGTGTATGGTGGTTGCTTCCCCAATACATCTTGTTTGGAGTTTCTGATGTGGTCACCAT
AGTTGGTCTTCAAGAGTTTTTCTATGATCAAGTCCCAACCGAATTAAGGAGTGTCGGTAT
CGCCCTCTACCTCAGTATCTTAGGTGTAGGGAACTTCCTGAGCAGCTTTCTTATCTCTGC
AATTGAAAAAGCAACTGGTGGAGATGGCCAACATAGCTGGTTCAACGATAATCTCAATCG
GGCACATCTCGATAACTATTATTGGGTTCTTGCAGGGCTGAGTGCAGTAGGATTGAGTTT
ATACCTGTATTTTGCAAAGTCTTACATATACAATAGGGGAAGTACATTATGAATGTTATT