Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g00490.t01
CDS Infomation

cds chromosome:12X:18:24956048:24960107:-1 gene:VIT_18s0041g00490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCATAGCTGGAACTCCGGGAGGCCCCGAATCTCCGCTGCTGGAAGACACCGTCGAT
GGCTACACGGATCACAAAGGCCGTCCAGCCAGGAGATCCACCTCAGGCGGTTGGAGATCT
GCATACTTCATCATAGGTGTTGAAGTTGCAGAGAGGTTTGCATACTATGGCATACAGGCC
AATCTTATAAACTATCTTACGGGTCGATTAGGGCAGTCCATAGCCAGTGCTGCCGAGAAT
GTGAATACATGGACAGGGACGGGGAGTCTACTGCCATTGGTAGGAGCATTCGTTGCAGAT
TCTTATCTTGGCCGATACCGAACCATCATTATTGCTTCTCTTCTTTACATCCTGGGACTA
GGGTTGTTAACACTGTCTGCTGTGCTTCCTTCTCCCAGCCCTTCTGACTGCAAAGAAAGC
AACCAAATCACATCATGTTCTCCTCCTCAGCTCCAAATAATCCTCTTCTTTTTCTCATTA
TATTTAGTGGCAGTAGGGCAAGGTGGGCACAAGCCTTGCACCCAGGCATTTGGAGCCGAC
CAATTTGATGGACGAAATCCAGAGGAATGCAAAGCCAAAAGCTCATTTTTCAACTGGTGG
TATTTTGGTCTTTGCTTTGGTACTGTAATAACTTACTCTGTCTTGACCTACATTCAAGAG
AACTTGAATTGGGGTCTTGGATTTGGAATTCCATGCGTTGTCATGATAGCGGCACTGCTC
CTTTTCTTGCTTGGGACTAGGACTTATCGATATAGTGTCAAAAAGGATGAGAGAAGCCCA
TTTGTGAGAATTGGTAAGGTGTTTATTGCAGCAGCTAAGAATTGGAGAACAATGCCTTCA
CTGGTAGCTACAGAAGAGTTAGCTAGAGAAGCCCCACATCACCAGCTTTCTCAACAATTC
AAGTGCTTGAACAAGGCGTTGCTTGCACCAGATGGTTCCAAAGGAAATGGAAGGCAGTGT
ACCATTGATGATGTTGAAGAAGCAAAGGCAGTTTTAAGGCTGTTTCCCATATGGGCTACT
TGTCTGGTGTATGCTATTGTGTTCGCACAGTCATCTACTTTCTTTACCAAGCAAGGAATC
ACCATGGACAGATCGATTGGATGGGGAATTGACATACCAGCTTCTTCACTCCAAGCCTTT
ATCAGCCTCTCCATTGTCCTCATCGTCCCCATATATGACCGCATCTTGGTTCCTATTGCA
AGAACCTTAACTAGGAAGCCATCTGGCATAACAATGCTTCAGAGGATCGGAACAGGCATG
TTTCTGTCCGCCATATCTATGGTAGTTGCAGCGCTAGTTGAGATGAAACGACTCAAAACC
GCTCAAGAACATGGGCTGGTTGATATGCCAAACGTGACCCTTCCAATGAGCGTATGGTGG
TTGCTTCCCCAATACATCTTGTTTGGAGTTTCTGATGTGTTCACCATGGTTGGTCTTCAA
GAGTTTTTCTATGATCAAGTCCCAATCGAATTAAGGAGTGTTGGTATCGCCCTCTACCTC
AGTATCTTAGGTGTAGGGAGCTTCCTGAGCAGCTTTCTTATCTCTGCAATTGAAAAGGCA
ACCGGTGGAGATGGCCAACATAGCTGA

Peptide Sequence

PEP ID

VIT_18s0041g00490.t01
PEP Infomation

pep chromosome:12X:18:24956048:24960107:-1 gene:VIT_18s0041g00490 transcript:VIT_18s0041g00490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTIAGTPGGPESPLLEDTVDGYTDHKGRPARRSTSGGWRSAYFIIGVEVAERFAYYGIQA
NLINYLTGRLGQSIASAAENVNTWTGTGSLLPLVGAFVADSYLGRYRTIIIASLLYILGL
GLLTLSAVLPSPSPSDCKESNQITSCSPPQLQIILFFFSLYLVAVGQGGHKPCTQAFGAD
QFDGRNPEECKAKSSFFNWWYFGLCFGTVITYSVLTYIQENLNWGLGFGIPCVVMIAALL
LFLLGTRTYRYSVKKDERSPFVRIGKVFIAAAKNWRTMPSLVATEELAREAPHHQLSQQF
KCLNKALLAPDGSKGNGRQCTIDDVEEAKAVLRLFPIWATCLVYAIVFAQSSTFFTKQGI
TMDRSIGWGIDIPASSLQAFISLSIVLIVPIYDRILVPIARTLTRKPSGITMLQRIGTGM
FLSAISMVVAALVEMKRLKTAQEHGLVDMPNVTLPMSVWWLLPQYILFGVSDVFTMVGLQ
EFFYDQVPIELRSVGIALYLSILGVGSFLSSFLISAIEKATGGDGQHS

Transcript Sequence

Transcript ID

VIT_18s0041g00490.t01
Transcript Infomation

cdna chromosome:12X:18:24956048:24960107:-1 gene:VIT_18s0041g00490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCCCCCTCAAACATGACCATAGCTGGAACTCCGGGAGGCCCCGAATCTCCGCTGCTGGA
AGACACCGTCGATGGCTACACGGATCACAAAGGCCGTCCAGCCAGGAGATCCACCTCAGG
CGGTTGGAGATCTGCATACTTCATCATAGGTGTTGAAGTTGCAGAGAGGTTTGCATACTA
TGGCATACAGGCCAATCTTATAAACTATCTTACGGGTCGATTAGGGCAGTCCATAGCCAG
TGCTGCCGAGAATGTGAATACATGGACAGGGACGGGGAGTCTACTGCCATTGGTAGGAGC
ATTCGTTGCAGATTCTTATCTTGGCCGATACCGAACCATCATTATTGCTTCTCTTCTTTA
CATCCTGGGACTAGGGTTGTTAACACTGTCTGCTGTGCTTCCTTCTCCCAGCCCTTCTGA
CTGCAAAGAAAGCAACCAAATCACATCATGTTCTCCTCCTCAGCTCCAAATAATCCTCTT
CTTTTTCTCATTATATTTAGTGGCAGTAGGGCAAGGTGGGCACAAGCCTTGCACCCAGGC
ATTTGGAGCCGACCAATTTGATGGACGAAATCCAGAGGAATGCAAAGCCAAAAGCTCATT
TTTCAACTGGTGGTATTTTGGTCTTTGCTTTGGTACTGTAATAACTTACTCTGTCTTGAC
CTACATTCAAGAGAACTTGAATTGGGGTCTTGGATTTGGAATTCCATGCGTTGTCATGAT
AGCGGCACTGCTCCTTTTCTTGCTTGGGACTAGGACTTATCGATATAGTGTCAAAAAGGA
TGAGAGAAGCCCATTTGTGAGAATTGGTAAGGTGTTTATTGCAGCAGCTAAGAATTGGAG
AACAATGCCTTCACTGGTAGCTACAGAAGAGTTAGCTAGAGAAGCCCCACATCACCAGCT
TTCTCAACAATTCAAGTGCTTGAACAAGGCGTTGCTTGCACCAGATGGTTCCAAAGGAAA
TGGAAGGCAGTGTACCATTGATGATGTTGAAGAAGCAAAGGCAGTTTTAAGGCTGTTTCC
CATATGGGCTACTTGTCTGGTGTATGCTATTGTGTTCGCACAGTCATCTACTTTCTTTAC
CAAGCAAGGAATCACCATGGACAGATCGATTGGATGGGGAATTGACATACCAGCTTCTTC
ACTCCAAGCCTTTATCAGCCTCTCCATTGTCCTCATCGTCCCCATATATGACCGCATCTT
GGTTCCTATTGCAAGAACCTTAACTAGGAAGCCATCTGGCATAACAATGCTTCAGAGGAT
CGGAACAGGCATGTTTCTGTCCGCCATATCTATGGTAGTTGCAGCGCTAGTTGAGATGAA
ACGACTCAAAACCGCTCAAGAACATGGGCTGGTTGATATGCCAAACGTGACCCTTCCAAT
GAGCGTATGGTGGTTGCTTCCCCAATACATCTTGTTTGGAGTTTCTGATGTGTTCACCAT
GGTTGGTCTTCAAGAGTTTTTCTATGATCAAGTCCCAATCGAATTAAGGAGTGTTGGTAT
CGCCCTCTACCTCAGTATCTTAGGTGTAGGGAGCTTCCTGAGCAGCTTTCTTATCTCTGC
AATTGAAAAGGCAACCGGTGGAGATGGCCAACATAGCTGATTCAATGATAATCTCAATCG
GGCACATCTCGATTACTATTATTGGTTTCTTGCAGGGCTGAGTGTGGTAGGATTGAGTTT
ATACCGGTATTTTGCAAAGTCTTACATATACAATAGGGGAAGTACATTATGAATGTTATT
GCCTCAATTGTTGTAAACATGCTCAATAAAA