Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g00200.t01
CDS Infomation

cds chromosome:12X:18:24591355:24594186:-1 gene:VIT_18s0041g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCGGATCGGACCGGAATGGTGACCGGCCGACGGTTGGACCGGTCCGACCGGCCGGT
CCGGTCCGGTTTTTAAAACATTGCTTATTATGTATTGGATCACTTGATGTTCGGATGGTA
GGAATTTGGGGCATGGCTGGCATAGGGAAGACTACCATTGCTAAAGTTATTTATGAGCGA
ATCTACACTCAATTTGAAGGTTGTTGCTTTCTTTCAAATGTTAGAGAAGAGTCATACAAA
CATGGTCTACCTTATTTACAAATGGAACTCCTTTCACAAATTTTAAAGGAAAGGAAACCA
AATGCAGGACTTTTTAATAAAGGAATCAATTTTATGAAGGATGTGCTCCACTCTAGGAAG
GTCCTTATTATCCTTGATGATGTGGATCAACGACAACAGTTGGAAGATTTAGCAGGATAC
AATAATTGGTTTGGTTTAGGAAGTCGAATTATCATAACAACTAGAGATCGACATTTGCTA
ACTTGTCAAGAAGTGGATGCAATATACGAAGTTAAGGAATTAGACAATGATGAAGCTCTT
AAGCTATTTTGTCTGTATGCCTTTAGACATAGGCATGGTACAGAAGATTTTAGGCAACTA
TGTGGCCATGCATTAGATTATACTAGTGGCCTCCCGTTAGCCCTTAAAGTCTTGGGTTCT
TCTCTATACACAAAAGGCATACATGAATGGGAGAGTGAATTGAACAAACTCAAACAATTC
CCCAACAAAGAAGTTCAAAATGTGCTCAAAACAAGTTTTGAAGGGTTAGATGACAATGAA
CAAAATATATTTCTTGATATTGCATTCTTTTATAAAGGGCATGATAAAGATTTTGTTGGA
GACATACTAGATAGTTGTGGTTTCTTCTTTGGCATTGGGATAAGAAATCTTGAAGATAAG
TCACTTATAACTATTTCGGAGAATAAGTTGTGCATGCATGATTTATTACAAGAAATGGGT
TGGGAAATTGTTAGACAAAAATCTGAAGTACCTGGCGAGCGTAGCAGGTTAAGAGTTCAT
GAGGACATCAATCATGTACTAACAACAAATACGGGGACCGAAGCAGTTGAAGGCATATTC
CTTGATTTGTCTGAATCAAAAGAGTTAAACTTTAGTATTGACGCCTTTACAAAGATGAAG
AGATTAAGATTGCTCAAAATTTGTAATGTGCAAATAGATAGAAGCTTAGGATATTTGTCA
AAAAAAGAGTTAATTGCCTATACTCATGATGTTTGGACAGAGAGGAATTATTTGTACACT
CAAAATAAATTGCACCTATATGAAGATTCCAAATTTCTATCCAACAACTTAAGAGATCTC
TATTGGCATGGATACCCTTTGAAGTCCTTTCCATCAAATTTTCATCCAGAGAAGCTTGTT
GAGCTAAACATGTGCTTTAGTAGACTTAAACAACTGTGGGAAGGAAAAAAGGGATTTGAG
AAGTTGAAATCCATCAAACTTAGCCACTCTCAACATCTAACCAAAACACCAGACTTCTCT
GGAGTGCCAAACCTTAGGAGACTAATTCTCAAAGGTTGTACAAGTTTGGTCGAGGTTCAC
CCATCTATTGGAGCTCTCAAGAAGCTTATTTTCCTGAATTTAGAAGGCTGCAAAAAACTC
AAGAGTTTCTCAAGCAGCATCCATATGGAGTCCCTTCAAATTCTTACTCTCTCTGGCTGC
TCAAAACTGAAGAAGTTTCCAGAGGTCCAAGGGAATATGGAACATCTACCAAATCTTTCT
TTAGAAGGGACTGCTATAAAAGGATTGCCCTTGTCCATTGAAAATCTCACTGGACTTGCT
TTGTTAAATCTGAAAGAGTGCAAAAGCCTTGAGTCACTACCCAGAAGCATTTTTAAGTTG
AAGTCCCTGAAAACTCTCATTCTTTCAAACTGCACAAGACTCAAGAAGCTTCCAGAGATC
CAGGAAAACATGGAGAGTTTGATGGAGCTTTTTCTAGATGGGAGTGGTATAATAGAACTG
CCTTCCTCAATTGGGTGTCTAAATGGGCTTGTTTTTTTGAATCTGAAGAATTGTAAAAAA
CTTGCAAGTCTTCCGCAAAGCTTTTGTGAGTTGACATCTCTTGGGACTCTTACTCTCTGT
GGTTGCTCAGAGCTGAAGGAATTGCCAGATGACTTGGGGAGCCTACAATGTTTAGCAGAG
CTGAATGCAGATGGAAGTGGTATACAAGAGGTTCCACCCTCTATTACTCTTTTGACAAAC
CTTCAAAAATTATCATTAGCAGGATGTAAGGGAGGGGATTCCAAGAGCATTGCCCAGTGA

Peptide Sequence

PEP ID

VIT_18s0041g00200.t01
PEP Infomation

pep chromosome:12X:18:24591355:24594186:-1 gene:VIT_18s0041g00200 transcript:VIT_18s0041g00200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTGSDRNGDRPTVGPVRPAGPVRFLKHCLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYER
IYTQFEGCCFLSNVREESYKHGLPYLQMELLSQILKERKPNAGLFNKGINFMKDVLHSRK
VLIILDDVDQRQQLEDLAGYNNWFGLGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEAL
KLFCLYAFRHRHGTEDFRQLCGHALDYTSGLPLALKVLGSSLYTKGIHEWESELNKLKQF
PNKEVQNVLKTSFEGLDDNEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDK
SLITISENKLCMHDLLQEMGWEIVRQKSEVPGERSRLRVHEDINHVLTTNTGTEAVEGIF
LDLSESKELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYT
QNKLHLYEDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFE
KLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKL
KSFSSSIHMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLA
LLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIEL
PSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAE
LNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDSKSIAQ

Transcript Sequence

Transcript ID

VIT_18s0041g00200.t01
Transcript Infomation

cdna chromosome:12X:18:24591355:24594186:-1 gene:VIT_18s0041g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCGGATCGGACCGGAATGGTGACCGGCCGACGGTTGGACCGGTCCGACCGGCCGGT
CCGGTCCGGTTTTTAAAACATTGCTTATTATGTATTGGATCACTTGATGTTCGGATGGTA
GGAATTTGGGGCATGGCTGGCATAGGGAAGACTACCATTGCTAAAGTTATTTATGAGCGA
ATCTACACTCAATTTGAAGGTTGTTGCTTTCTTTCAAATGTTAGAGAAGAGTCATACAAA
CATGGTCTACCTTATTTACAAATGGAACTCCTTTCACAAATTTTAAAGGAAAGGAAACCA
AATGCAGGACTTTTTAATAAAGGAATCAATTTTATGAAGGATGTGCTCCACTCTAGGAAG
GTCCTTATTATCCTTGATGATGTGGATCAACGACAACAGTTGGAAGATTTAGCAGGATAC
AATAATTGGTTTGGTTTAGGAAGTCGAATTATCATAACAACTAGAGATCGACATTTGCTA
ACTTGTCAAGAAGTGGATGCAATATACGAAGTTAAGGAATTAGACAATGATGAAGCTCTT
AAGCTATTTTGTCTGTATGCCTTTAGACATAGGCATGGTACAGAAGATTTTAGGCAACTA
TGTGGCCATGCATTAGATTATACTAGTGGCCTCCCGTTAGCCCTTAAAGTCTTGGGTTCT
TCTCTATACACAAAAGGCATACATGAATGGGAGAGTGAATTGAACAAACTCAAACAATTC
CCCAACAAAGAAGTTCAAAATGTGCTCAAAACAAGTTTTGAAGGGTTAGATGACAATGAA
CAAAATATATTTCTTGATATTGCATTCTTTTATAAAGGGCATGATAAAGATTTTGTTGGA
GACATACTAGATAGTTGTGGTTTCTTCTTTGGCATTGGGATAAGAAATCTTGAAGATAAG
TCACTTATAACTATTTCGGAGAATAAGTTGTGCATGCATGATTTATTACAAGAAATGGGT
TGGGAAATTGTTAGACAAAAATCTGAAGTACCTGGCGAGCGTAGCAGGTTAAGAGTTCAT
GAGGACATCAATCATGTACTAACAACAAATACGGGGACCGAAGCAGTTGAAGGCATATTC
CTTGATTTGTCTGAATCAAAAGAGTTAAACTTTAGTATTGACGCCTTTACAAAGATGAAG
AGATTAAGATTGCTCAAAATTTGTAATGTGCAAATAGATAGAAGCTTAGGATATTTGTCA
AAAAAAGAGTTAATTGCCTATACTCATGATGTTTGGACAGAGAGGAATTATTTGTACACT
CAAAATAAATTGCACCTATATGAAGATTCCAAATTTCTATCCAACAACTTAAGAGATCTC
TATTGGCATGGATACCCTTTGAAGTCCTTTCCATCAAATTTTCATCCAGAGAAGCTTGTT
GAGCTAAACATGTGCTTTAGTAGACTTAAACAACTGTGGGAAGGAAAAAAGGGATTTGAG
AAGTTGAAATCCATCAAACTTAGCCACTCTCAACATCTAACCAAAACACCAGACTTCTCT
GGAGTGCCAAACCTTAGGAGACTAATTCTCAAAGGTTGTACAAGTTTGGTCGAGGTTCAC
CCATCTATTGGAGCTCTCAAGAAGCTTATTTTCCTGAATTTAGAAGGCTGCAAAAAACTC
AAGAGTTTCTCAAGCAGCATCCATATGGAGTCCCTTCAAATTCTTACTCTCTCTGGCTGC
TCAAAACTGAAGAAGTTTCCAGAGGTCCAAGGGAATATGGAACATCTACCAAATCTTTCT
TTAGAAGGGACTGCTATAAAAGGATTGCCCTTGTCCATTGAAAATCTCACTGGACTTGCT
TTGTTAAATCTGAAAGAGTGCAAAAGCCTTGAGTCACTACCCAGAAGCATTTTTAAGTTG
AAGTCCCTGAAAACTCTCATTCTTTCAAACTGCACAAGACTCAAGAAGCTTCCAGAGATC
CAGGAAAACATGGAGAGTTTGATGGAGCTTTTTCTAGATGGGAGTGGTATAATAGAACTG
CCTTCCTCAATTGGGTGTCTAAATGGGCTTGTTTTTTTGAATCTGAAGAATTGTAAAAAA
CTTGCAAGTCTTCCGCAAAGCTTTTGTGAGTTGACATCTCTTGGGACTCTTACTCTCTGT
GGTTGCTCAGAGCTGAAGGAATTGCCAGATGACTTGGGGAGCCTACAATGTTTAGCAGAG
CTGAATGCAGATGGAAGTGGTATACAAGAGGTTCCACCCTCTATTACTCTTTTGACAAAC
CTTCAAAAATTATCATTAGCAGGATGTAAGGGAGGGGATTCCAAGAGCATTGCCCAGTGA