Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0041g00040.t01
CDS Infomation

cds chromosome:12X:18:24275038:24277541:1 gene:VIT_18s0041g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGGTGCGACTTATGCTAGTAGGTTTGCTGCTATTGGCTTCAGCTGCAGCTGCTGCT
GCAACAGTTGGTCAAGCCAAGGAAGGTTGCCTAGACAAATGTGGAGATGTTAGCATCCCA
TATCCGTTTGGTACTAATGAAGAGCAGTGTTACCTCAGCCCTTATTTCCTAGTTACTTGT
AACCATTCCTCCAACCCTCCCAAACTGCTATTAGGCAAACCATCTCCAGAGGGAAACAAT
GTCCAAGTGCTGGATATTTCGCTGGAGGGTGAGTTGCTCATCTTGAACTACGTAAGCCAT
GATTGTTACAATAGGTCCGGTGGGCTTGACTCCCTCTATTCTTACGGTTCCCATCTGACG
CCGGGCCAATTCAACATCTCGAGTACCAGAAACAAGTTCACTATGGTTGGTTGCGACACT
TATGCCTGGTTTAGAGGTCAAAGAGGTGAGGAAAGCTACAGAACTGGGTGCATGTCATTA
TGTGACAACATCACAGCTGTACGAAATGGATCTTGCTCTGGAAATGGTTGTTGCCAGACC
TCCATCCCTGATGAATTATCAGATATACGTTTGACATTGGGCACCTTCAATAATTATTCT
GAAATCTGGGAATTCAATCCCTGCGGCTATGCCTTTATTGTGGAAGAATCTCACTTCACT
TTCTCCTCCGACGATCTAAAAGATTTGAAGGGCATAGAGAAGCTTCCTATGGTATTTGAT
TGGGCATTTGGCAAGGAAACATGTCAAGTAGAAGATGAAAACAGCCAGACCAATTACGCA
TGCAAGGGGAACAGCAGCTGCAATAAGAGGAAAACGGGTTGGGGCTATCTTTGCAACTGC
TCAGAGGGTTACCAAGGGAACCCATACCTGGAGTCTGGTTGCCAAGATATAAATGAATGT
GAGAATTCCATCCTCAACAAGTGTGAAAATCCAGAAACATGCGTCAATACCCAAGGAAAT
TATACTTGTTCTTGCCCCATGTGGTACCAGGGAGATGGCAAAATCGATGGTCAACGCTGT
ATTCCCAATCGCTTGCAAATGATTCACGCTGCCATGGGCATTGGAATTGCCTTGCTCGTA
TTATTGGTGAGCAGCACTTGGCTGTTTTGGGCTTTGAAGAAAAGAAGGTTCATCAAACTC
AAAAAGAAATATTTTCAACAAAATGGTGGTTCAGAGCTACGACAACTCTCCAGGCAAGGA
TCTACCGCAAGAATTAAAATTTTTACCTTTGAAGAGCTTGAGAAAGCCACCAAAAAATAT
GATGAGAGCAATATCATCGGCCGAGGAGGTTTTGGCACAGTTTATAAAGGAACTTTAACC
GATGGTAGGATTGTTGCAATTAAGAAGTCCAAGATGGTGGAACAAAGCCAAGGTAAAGAC
TTCATAAATGAGGTGGGTATTCTATCTCAAATAAACCATCGTCATGTGATACAACTCTTG
GGTTGCTGTTTGGAAACACAAGTGCCTTTACTAGTCTATGAGTTCATCAACAATGGCACC
CTCTCCGACCACATACATAATGAAAATAAGGCATCTGCTATCATGTGGGAAACTCGTTTA
AGGATTGCCATCCAAACCGCAGAAGCCCTATATTATTTACATTCTGTGGCATCTACGCCT
ATCATTCATAGAGATGTTAAGTCTACCAATATACTATTAGATGCGGAGTACAATGTAAAG
GTGTGTGACTTTGGAGCTTCAAGATTGGTTCCATTGGATCAAACTCAGTTATCTACAGCT
GTTCAGGGAACTCCTGGATACTTAGACCCGGAGTCTATGCAGACAAACCAAGTGACCGAG
AAAAGTGACGTTTATAGTTTCGGAGTGGTCCTTGTAGAGCTACTCACAGGCAAGAAAGCA
CTATTTTTTGATAGACCCAAGGAGCAGAGAATTCTAACTATGTTTTTCCTCTTTGCCCTG
AAAGATGACAGCTTATTTCAGGTTCTTGAGGATTGTATAGTGAACAATGGAAACCATATG
CAGATTTTGAAAGTTGCTCAACTTGCGAAAAGATGCCTAAGCATAAAAGGGGAGGACAGA
CCCACAATGAAGGAAGTAGTGTTGGAACTAGAGATAGTGAGAATGATTGGGGAAAATGCT
GAACAGAATCCAGAAGATAATGCATACTTGCTTAGAAAATCATCAGCTCACTGCTATTTG
GGTGGTGCTGAATTATCCACTGCTACACATAGCATGGTGGGCAATTTCTTGTTACCAGTA
AGTGATGCAAGATAA

Peptide Sequence

PEP ID

VIT_18s0041g00040.t01
PEP Infomation

pep chromosome:12X:18:24275038:24277541:1 gene:VIT_18s0041g00040 transcript:VIT_18s0041g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMVRLMLVGLLLLASAAAAAATVGQAKEGCLDKCGDVSIPYPFGTNEEQCYLSPYFLVTC
NHSSNPPKLLLGKPSPEGNNVQVLDISLEGELLILNYVSHDCYNRSGGLDSLYSYGSHLT
PGQFNISSTRNKFTMVGCDTYAWFRGQRGEESYRTGCMSLCDNITAVRNGSCSGNGCCQT
SIPDELSDIRLTLGTFNNYSEIWEFNPCGYAFIVEESHFTFSSDDLKDLKGIEKLPMVFD
WAFGKETCQVEDENSQTNYACKGNSSCNKRKTGWGYLCNCSEGYQGNPYLESGCQDINEC
ENSILNKCENPETCVNTQGNYTCSCPMWYQGDGKIDGQRCIPNRLQMIHAAMGIGIALLV
LLVSSTWLFWALKKRRFIKLKKKYFQQNGGSELRQLSRQGSTARIKIFTFEELEKATKKY
DESNIIGRGGFGTVYKGTLTDGRIVAIKKSKMVEQSQGKDFINEVGILSQINHRHVIQLL
GCCLETQVPLLVYEFINNGTLSDHIHNENKASAIMWETRLRIAIQTAEALYYLHSVASTP
IIHRDVKSTNILLDAEYNVKVCDFGASRLVPLDQTQLSTAVQGTPGYLDPESMQTNQVTE
KSDVYSFGVVLVELLTGKKALFFDRPKEQRILTMFFLFALKDDSLFQVLEDCIVNNGNHM
QILKVAQLAKRCLSIKGEDRPTMKEVVLELEIVRMIGENAEQNPEDNAYLLRKSSAHCYL
GGAELSTATHSMVGNFLLPVSDAR

Transcript Sequence

Transcript ID

VIT_18s0041g00040.t01
Transcript Infomation

cdna chromosome:12X:18:24275038:24277541:1 gene:VIT_18s0041g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGGTGCGACTTATGCTAGTAGGTTTGCTGCTATTGGCTTCAGCTGCAGCTGCTGCT
GCAACAGTTGGTCAAGCCAAGGAAGGTTGCCTAGACAAATGTGGAGATGTTAGCATCCCA
TATCCGTTTGGTACTAATGAAGAGCAGTGTTACCTCAGCCCTTATTTCCTAGTTACTTGT
AACCATTCCTCCAACCCTCCCAAACTGCTATTAGGCAAACCATCTCCAGAGGGAAACAAT
GTCCAAGTGCTGGATATTTCGCTGGAGGGTGAGTTGCTCATCTTGAACTACGTAAGCCAT
GATTGTTACAATAGGTCCGGTGGGCTTGACTCCCTCTATTCTTACGGTTCCCATCTGACG
CCGGGCCAATTCAACATCTCGAGTACCAGAAACAAGTTCACTATGGTTGGTTGCGACACT
TATGCCTGGTTTAGAGGTCAAAGAGGTGAGGAAAGCTACAGAACTGGGTGCATGTCATTA
TGTGACAACATCACAGCTGTACGAAATGGATCTTGCTCTGGAAATGGTTGTTGCCAGACC
TCCATCCCTGATGAATTATCAGATATACGTTTGACATTGGGCACCTTCAATAATTATTCT
GAAATCTGGGAATTCAATCCCTGCGGCTATGCCTTTATTGTGGAAGAATCTCACTTCACT
TTCTCCTCCGACGATCTAAAAGATTTGAAGGGCATAGAGAAGCTTCCTATGGTATTTGAT
TGGGCATTTGGCAAGGAAACATGTCAAGTAGAAGATGAAAACAGCCAGACCAATTACGCA
TGCAAGGGGAACAGCAGCTGCAATAAGAGGAAAACGGGTTGGGGCTATCTTTGCAACTGC
TCAGAGGGTTACCAAGGGAACCCATACCTGGAGTCTGGTTGCCAAGATATAAATGAATGT
GAGAATTCCATCCTCAACAAGTGTGAAAATCCAGAAACATGCGTCAATACCCAAGGAAAT
TATACTTGTTCTTGCCCCATGTGGTACCAGGGAGATGGCAAAATCGATGGTCAACGCTGT
ATTCCCAATCGCTTGCAAATGATTCACGCTGCCATGGGCATTGGAATTGCCTTGCTCGTA
TTATTGGTGAGCAGCACTTGGCTGTTTTGGGCTTTGAAGAAAAGAAGGTTCATCAAACTC
AAAAAGAAATATTTTCAACAAAATGGTGGTTCAGAGCTACGACAACTCTCCAGGCAAGGA
TCTACCGCAAGAATTAAAATTTTTACCTTTGAAGAGCTTGAGAAAGCCACCAAAAAATAT
GATGAGAGCAATATCATCGGCCGAGGAGGTTTTGGCACAGTTTATAAAGGAACTTTAACC
GATGGTAGGATTGTTGCAATTAAGAAGTCCAAGATGGTGGAACAAAGCCAAGGTAAAGAC
TTCATAAATGAGGTGGGTATTCTATCTCAAATAAACCATCGTCATGTGATACAACTCTTG
GGTTGCTGTTTGGAAACACAAGTGCCTTTACTAGTCTATGAGTTCATCAACAATGGCACC
CTCTCCGACCACATACATAATGAAAATAAGGCATCTGCTATCATGTGGGAAACTCGTTTA
AGGATTGCCATCCAAACCGCAGAAGCCCTATATTATTTACATTCTGTGGCATCTACGCCT
ATCATTCATAGAGATGTTAAGTCTACCAATATACTATTAGATGCGGAGTACAATGTAAAG
GTGTGTGACTTTGGAGCTTCAAGATTGGTTCCATTGGATCAAACTCAGTTATCTACAGCT
GTTCAGGGAACTCCTGGATACTTAGACCCGGAGTCTATGCAGACAAACCAAGTGACCGAG
AAAAGTGACGTTTATAGTTTCGGAGTGGTCCTTGTAGAGCTACTCACAGGCAAGAAAGCA
CTATTTTTTGATAGACCCAAGGAGCAGAGAATTCTAACTATGTTTTTCCTCTTTGCCCTG
AAAGATGACAGCTTATTTCAGGTTCTTGAGGATTGTATAGTGAACAATGGAAACCATATG
CAGATTTTGAAAGTTGCTCAACTTGCGAAAAGATGCCTAAGCATAAAAGGGGAGGACAGA
CCCACAATGAAGGAAGTAGTGTTGGAACTAGAGATAGTGAGAATGATTGGGGAAAATGCT
GAACAGAATCCAGAAGATAATGCATACTTGCTTAGAAAATCATCAGCTCACTGCTATTTG
GGTGGTGCTGAATTATCCACTGCTACACATAGCATGGTGGGCAATTTCTTGTTACCAGTA
AGTGATGCAAGATAA