Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g15600.t01
CDS Infomation

cds chromosome:12X:18:13720692:13730593:1 gene:VIT_18s0001g15600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGCTGATATCGGCCGTACGTGATTATATGTCCCGGATGTTGCAGGACATCTCGGGC
ATGAAGGTTCTTATCCTCGATTCTCAAACGGTTAGTATTGTGAGTGTTGTTTATTCTCAA
TCAGAGCTTCTTCAGAAAGAAGTGTTTCTTGTAGAATTGGTGGATTCCATTTCCATGTCG
AAGGAATCCATGTCGCATCTCAAAGCTGTCTATTTCCTCAGGCCAACCTCGGAGAATATT
CAGCATTTACGACGGCAGTTTGCTAGTCCTAGATTTGGAGAGTATCACCTGTTTTTTTCC
AACATTTTAAAGGATACTCAGATTCATATTTTAGCTGATTCGGATGAGCAGGAGGTTGTC
CAGCAAGTTCAGGAGTTCTATGCAGACTTTGTTGCAATAGATCCTTTCCATTTTACTTTG
AACATGCCATCGAATCACATTTATATGCTCCCAGCAGTTGTAGATCCTTCAGGTTTGCAG
CACTACTGTGATCGAGTTGTTGATGGCATTGGGGCAATTTTCTTGGCTTTAAAACGACGG
CCTGTTATTCGATATCAACGAACCTCTGATATTGCAAAAAGAATTGCACAGGAAACAGCG
AAACTGATGTACCAGCAGGAAAGTGGTCTTTTTGACTTCAGACGAACGGAAGTATCTCCA
TTATTGCTGGTAGTTGATAGGAGGGATGACCCTGTCACTCCACTTCTCAATCAATGGACA
TATCAGGCAATGGTTCATGAGTTAATAGGTATCCAAGATAATAAAGTAGACCTGACAAAC
ATTGGCAAGTTTCCTAAAGATCAGCAGGAGGTTGTCCTGTCGTCTGAACAAGATGCATTT
TTTAAAGCTAACATGTATGAGAACTTTGGAGATATTGGAATGAATATCAAAAGAATGGTG
GATGAGTTTCAGCAAATTTCAAAAAGTAACCAGAATATTCAGACAGTAGAAGATATGGCT
AAATTTGTTGACAATTATCCCGAGTACAAAAAAATGCATGGCAATGTTTCAAAGCATGTT
ACTATGGTCACAGAAATGAGCAAGATAGTTGAAGAGCGAAAGCTTATGTTAGTTTCACAA
ACGGAACAAGATTTGGCTTGCAATGGTGGGCAAGTGGCCGCATTTGAGGCTGTGACAAAT
CTCTTAAATGATGAAAGAGTTTCTGATGTTGATCGCTTACGCCTAGTGATGTTGTATGCT
TTGCGCTATGAGAAGGAAAGCCCTGTTCAACTGATGCAGCTTTTCAACAAGTTGGCATCC
CGGTCTGCAAAATACAAGCCTGGGCTTGTCCAATTCCTCTTGAAGCAAGCAGGTGTTGAT
AAGCGAATTGGGGATCTATATGGAAATCGAGATCTCTTAAATATTGCTCGTAACATGGCT
CGTGGGCTGAAGGGGGTTGAGAATGTGTACACCCAACACCAGCCTCTTCTATTCCAAACT
ATGGAAAGCATCAACAAAGGGCGGTTAAGAGATGTGGACTACCCCTTCATTGGAAATCAC
TTTCAGCAGGGCAGGCCGCAAGATGTGGTGATTTTCATCGTTGGTGGGACAACATATGAA
GAGTCACGTTCCATTGCTCTACAAAATGCCAGCAATTCTGGGATTCGTTTTATACTTGGT
GGATCTGTGGTTCTCAATTCTAAGAGGTTTCTGAAGGACCTGGAAGAAGCTCAGAGGATA
GCACGCACCAGCACCAATGTGGTTTGA

Peptide Sequence

PEP ID

VIT_18s0001g15600.t01
PEP Infomation

pep chromosome:12X:18:13720692:13730593:1 gene:VIT_18s0001g15600 transcript:VIT_18s0001g15600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVLISAVRDYMSRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISMS
KESMSHLKAVYFLRPTSENIQHLRRQFASPRFGEYHLFFSNILKDTQIHILADSDEQEVV
QQVQEFYADFVAIDPFHFTLNMPSNHIYMLPAVVDPSGLQHYCDRVVDGIGAIFLALKRR
PVIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEVSPLLLVVDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLTNIGKFPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKRMV
DEFQQISKSNQNIQTVEDMAKFVDNYPEYKKMHGNVSKHVTMVTEMSKIVEERKLMLVSQ
TEQDLACNGGQVAAFEAVTNLLNDERVSDVDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSAKYKPGLVQFLLKQAGVDKRIGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT
MESINKGRLRDVDYPFIGNHFQQGRPQDVVIFIVGGTTYEESRSIALQNASNSGIRFILG
GSVVLNSKRFLKDLEEAQRIARTSTNVV

Transcript Sequence

Transcript ID

VIT_18s0001g15600.t01
Transcript Infomation

cdna chromosome:12X:18:13720692:13730593:1 gene:VIT_18s0001g15600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAACGGCTAGTATCTGTGGATCAGAAATGGTGCTGATATCGGCCGTACGTGATTATATG
TCCCGGATGTTGCAGGACATCTCGGGCATGAAGGTTCTTATCCTCGATTCTCAAACGGTT
AGTATTGTGAGTGTTGTTTATTCTCAATCAGAGCTTCTTCAGAAAGAAGTGTTTCTTGTA
GAATTGGTGGATTCCATTTCCATGTCGAAGGAATCCATGTCGCATCTCAAAGCTGTCTAT
TTCCTCAGGCCAACCTCGGAGAATATTCAGCATTTACGACGGCAGTTTGCTAGTCCTAGA
TTTGGAGAGTATCACCTGTTTTTTTCCAACATTTTAAAGGATACTCAGATTCATATTTTA
GCTGATTCGGATGAGCAGGAGGTTGTCCAGCAAGTTCAGGAGTTCTATGCAGACTTTGTT
GCAATAGATCCTTTCCATTTTACTTTGAACATGCCATCGAATCACATTTATATGCTCCCA
GCAGTTGTAGATCCTTCAGGTTTGCAGCACTACTGTGATCGAGTTGTTGATGGCATTGGG
GCAATTTTCTTGGCTTTAAAACGACGGCCTGTTATTCGATATCAACGAACCTCTGATATT
GCAAAAAGAATTGCACAGGAAACAGCGAAACTGATGTACCAGCAGGAAAGTGGTCTTTTT
GACTTCAGACGAACGGAAGTATCTCCATTATTGCTGGTAGTTGATAGGAGGGATGACCCT
GTCACTCCACTTCTCAATCAATGGACATATCAGGCAATGGTTCATGAGTTAATAGGTATC
CAAGATAATAAAGTAGACCTGACAAACATTGGCAAGTTTCCTAAAGATCAGCAGGAGGTT
GTCCTGTCGTCTGAACAAGATGCATTTTTTAAAGCTAACATGTATGAGAACTTTGGAGAT
ATTGGAATGAATATCAAAAGAATGGTGGATGAGTTTCAGCAAATTTCAAAAAGTAACCAG
AATATTCAGACAGTAGAAGATATGGCTAAATTTGTTGACAATTATCCCGAGTACAAAAAA
ATGCATGGCAATGTTTCAAAGCATGTTACTATGGTCACAGAAATGAGCAAGATAGTTGAA
GAGCGAAAGCTTATGTTAGTTTCACAAACGGAACAAGATTTGGCTTGCAATGGTGGGCAA
GTGGCCGCATTTGAGGCTGTGACAAATCTCTTAAATGATGAAAGAGTTTCTGATGTTGAT
CGCTTACGCCTAGTGATGTTGTATGCTTTGCGCTATGAGAAGGAAAGCCCTGTTCAACTG
ATGCAGCTTTTCAACAAGTTGGCATCCCGGTCTGCAAAATACAAGCCTGGGCTTGTCCAA
TTCCTCTTGAAGCAAGCAGGTGTTGATAAGCGAATTGGGGATCTATATGGAAATCGAGAT
CTCTTAAATATTGCTCGTAACATGGCTCGTGGGCTGAAGGGGGTTGAGAATGTGTACACC
CAACACCAGCCTCTTCTATTCCAAACTATGGAAAGCATCAACAAAGGGCGGTTAAGAGAT
GTGGACTACCCCTTCATTGGAAATCACTTTCAGCAGGGCAGGCCGCAAGATGTGGTGATT
TTCATCGTTGGTGGGACAACATATGAAGAGTCACGTTCCATTGCTCTACAAAATGCCAGC
AATTCTGGGATTCGTTTTATACTTGGTGGATCTGTGGTTCTCAATTCTAAGAGGTTTCTG
AAGGACCTGGAAGAAGCTCAGAGGATAGCACGCACCAGCACCAATGTGGTTTGAAGTTGA
CTTGTGGTCATACTTGGCATCTTAAAGCCATGTAAATAGGTTTTTTGTGAGTCAATACGG
GATTTTGAGCAGCAACTCCATAACATAGATCCATCAGAATCAGCCTATACCATCATGAAA
TGGAGTTGACATTTATGGATTTACAGAGAGGATAAAGGTGAAATAGATTTTGAGGAGGAA
GATCTAAAAGCCCTAAAGCCATCATGGAGGATTGTATCTTAAAGAAAAATCATGACTACT
AATTTCTTGTATTGTGAAGCCAGGTATCCTTCAGTTCATAAAAGTCTGTTTCTGTGTGAT
GAAAGAAGGAACTGTAATTTCATATATCAAGAAAACCCCTATTCTTTGTCTTTTTTCATT
TTTTATTATTTTATTTTATTTTATCTTTCCATCTTTGTAGTTATATTATCATGATTATTA
CCACTTTTGAGAAAAAACCATTACAAGTAATCAATGTTGAAGATTTTTATTTTT