Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g15410.t01
CDS Infomation

cds chromosome:12X:18:13539135:13541625:-1 gene:VIT_18s0001g15410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAGGCACTGCTGGTCAAGTCATCTGCTGCAAAGCTGCTGTGGCATGGGAAGCAGGG
AAGCCATTAGTGATAGAAGAAGTGGAGGTGGCACCCCCACAGGCCATGGAGGTCCGTCTC
AAGATCCTCTACACCTCCCTATGTCACACTGATGTCTACTTTTGGGAAGCCAAGGGACAG
ACCCCTTTGTTCCCTCGAATTTTCGGTCATGAAGCAGGAGGGATTGTGGAGAGTGTTGGG
GAGGGTGTGACAGATCTCAAACCAGGAGACCATGTCCTCCCAATATTCACCGGAGAGTGC
AAGGACTGTGCTCACTGCAAATCAGAAGAAAGCAACCTGTGTGACCTCCTCAGGATAAAC
ACTGACAGAGGGGTGATGATCCATGATGGAAAATCAAGATTCACCATTAAGGGCAAACCC
GTATACCATTTTTTGGGAACTTCCACCTTTAGTGAATACACCGTCGTTCACGTTGGCTGT
GTTGCTAAGATCAATCCCTTGGCCCCTCTTGACAAAGTCTGTGTCCTCAGTTGCGGCATC
TCCACAGGCCTCGGTGCCACTCTCAATGTGGCAAAACCGACCAAGGGCTCAACCGTAGCC
GTCTTTGGACTGGGAGCTGTAGGTCTTGCTGCTGCAGAAGGGGCTAGGATTGCTGGCGCT
TCGAGGATTATTGGTGTTGATTTGAATCCAAAAAGATACGAAGACGCCAAGAAGTTTGGT
GTGACCGACTTTGTGAACCCAAAAGACCATGAGAAATCAGTTCAAGAGGTTATTGTGGAG
ATGACCGGTGGAGGCGTCGACAGAAGCCTCGAATGCACTGGAAATGTCAATGCCATGATT
TCTGCATTCGAATGTGTTCATGATGGTTGGGGTGTTGCAGTAATTGTGGGGGTACCAAAC
AAAGATGATGTCTTCAAGACCCACCCCATCAACCTGTTGAATGAAAGAACTCTCAAGGGA
ACCTTCTTTGGGAACTACAAGCCCCGTTCTGATATTCCGGCTGTGGTGGAAAAATACATG
AACAAGGAGCTTGAGGTGGAAAAATTCATCACCCATTCAGTTCCGTTCTCAGAGATCAAC
AAGGCCTTTGAATACATGCTAAACGGGGAAGGCCTTCGATGCATCATCCATATGGAGCCA
TAG

Peptide Sequence

PEP ID

VIT_18s0001g15410.t01
PEP Infomation

pep chromosome:12X:18:13539135:13541625:-1 gene:VIT_18s0001g15410 transcript:VIT_18s0001g15410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILYTSLCHTDVYFWEAKGQ
TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPIFTGECKDCAHCKSEESNLCDLLRIN
TDRGVMIHDGKSRFTIKGKPVYHFLGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI
STGLGATLNVAKPTKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPKRYEDAKKFG
VTDFVNPKDHEKSVQEVIVEMTGGGVDRSLECTGNVNAMISAFECVHDGWGVAVIVGVPN
KDDVFKTHPINLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEIN
KAFEYMLNGEGLRCIIHMEP

Transcript Sequence

Transcript ID

VIT_18s0001g15410.t01
Transcript Infomation

cdna chromosome:12X:18:13539135:13541625:-1 gene:VIT_18s0001g15410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGGAGTATCTAAGAAAATATGTCAGGCACTGCTGGTCAAGTCATCTGCTGCAAAGCTG
CTGTGGCATGGGAAGCAGGGAAGCCATTAGTGATAGAAGAAGTGGAGGTGGCACCCCCAC
AGGCCATGGAGGTCCGTCTCAAGATCCTCTACACCTCCCTATGTCACACTGATGTCTACT
TTTGGGAAGCCAAGGGACAGACCCCTTTGTTCCCTCGAATTTTCGGTCATGAAGCAGGAG
GGATTGTGGAGAGTGTTGGGGAGGGTGTGACAGATCTCAAACCAGGAGACCATGTCCTCC
CAATATTCACCGGAGAGTGCAAGGACTGTGCTCACTGCAAATCAGAAGAAAGCAACCTGT
GTGACCTCCTCAGGATAAACACTGACAGAGGGGTGATGATCCATGATGGAAAATCAAGAT
TCACCATTAAGGGCAAACCCGTATACCATTTTTTGGGAACTTCCACCTTTAGTGAATACA
CCGTCGTTCACGTTGGCTGTGTTGCTAAGATCAATCCCTTGGCCCCTCTTGACAAAGTCT
GTGTCCTCAGTTGCGGCATCTCCACAGGCCTCGGTGCCACTCTCAATGTGGCAAAACCGA
CCAAGGGCTCAACCGTAGCCGTCTTTGGACTGGGAGCTGTAGGTCTTGCTGCTGCAGAAG
GGGCTAGGATTGCTGGCGCTTCGAGGATTATTGGTGTTGATTTGAATCCAAAAAGATACG
AAGACGCCAAGAAGTTTGGTGTGACCGACTTTGTGAACCCAAAAGACCATGAGAAATCAG
TTCAAGAGGTTATTGTGGAGATGACCGGTGGAGGCGTCGACAGAAGCCTCGAATGCACTG
GAAATGTCAATGCCATGATTTCTGCATTCGAATGTGTTCATGATGGTTGGGGTGTTGCAG
TAATTGTGGGGGTACCAAACAAAGATGATGTCTTCAAGACCCACCCCATCAACCTGTTGA
ATGAAAGAACTCTCAAGGGAACCTTCTTTGGGAACTACAAGCCCCGTTCTGATATTCCGG
CTGTGGTGGAAAAATACATGAACAAGGAGCTTGAGGTGGAAAAATTCATCACCCATTCAG
TTCCGTTCTCAGAGATCAACAAGGCCTTTGAATACATGCTAAACGGGGAAGGCCTTCGAT
GCATCATCCATATGGAGCCATAGAATATCTTGAGATGAGAGAGTCTAATTGAATAAAACT
AAGGTGATCTTGGGTGACTTTCATATTAGAAGGTTTGGTTTTAGCCGGTGAAAGAGAGCA
TCTGTCTGGTTGTTACTATGAAAATAACTATGGTTAATAAAGGAGGTCAAAACTCATTCC
CCTTGGCTTTAAATTTTTC