Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g15400.t01
CDS Infomation

cds chromosome:12X:18:13526007:13535458:1 gene:VIT_18s0001g15400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor SPT5 [Source:UniProtKB/TrEMBL;Acc:E0CQN1]
Sequence

ATGCCTCGCCGGAGACACGACGACGACGACGATGATCTGGAGCCCGAGGAAGATGATGTT
CTCGACGACGACGAAGATTACGAGGACGAGGACGTCGGAGTCGGTTCAAGTCGCAAGAGG
TCGAGATCTGAGTTTATAGATGATGTTGCCGAGGAGGACGACGACGAGGATGACGACGAC
GACGATGAAGATTTTGGAGGTAGTCGTCGCGGCAGCCACCGGGCCAAGAGGCGGTCTGGC
TCCGAGTTTCTGGACCTTGAAGCTGCGGTCGACAGTGATGAGGAAGAGGAGGAGGAAGAC
GGCGAGGATGATTTCATTGTTGATGCTGGAGCTGAATTACCCGATGAAGATGATGGTCAG
AGGATGCGTCGTCGCCCCTTGCTACCACAAGAAGACGAGCAAGAAGATTTTGAGGCTCTA
GAGAGAAAGATTCAGGAAAGATATGGTAAGTCAAGTCATGCAGAATATGATGAGGAGACC
ACGGAGGTAGAACAGCAAGCTCTTTTGCCATCTGTTAGGGATCCTAAGTTGTGGATGGTG
AAATGTGCGATTGGTCATGAGCGAGAGGCAGCTGTTTGCCTAATGCAGAAATCCATCGAT
AAAGGACCTGAGGTGCAGATCAGGTCTGCTATTGCCCTAGATCATCTAAAAAACTATATA
TATATTGAAGCTGACAAAGAAGCTCATGTGAAGGAGGCATGCAAAGGTCTACGCAACATA
TATGCCCAGAAAGTAATGCTTGTTCCGATTAGAGAAATGACTGATGTACTTTCTGTTGAA
AGCAAAGCAGTTGATCTTTCTAGGAATACTTGGGTCAGAATGAAGATTGGGACATATAAA
GGAGATCTGGCAAAAGTAGTTGATGTGGACAATGTGCGACAGAGAGTTACTGTGCAACTA
ATTCCAAGAATTGACTTGCAAGCTCTTGCAAATAAGCTGGAAGGTAGAGAAGTTGTGACA
AAGAAGGCCTTTAAACCTCCTCCACGTTTTATGAATGTTGAGGAAGCTAGAGAAATGCAT
ATCCGTGTAGAGCGTAGGCGGGATCCGATGACTGGTGATTATTTCGAGAATATAGGTGGT
ATGATGTTCAAGGATGGTTTCTTGTATAAAACAGTGTCCATGAAATCAATTAGTGTTCAG
AACATACAGCCCACATTTGATGAACTTGAGAAATTTCGAACACCTGGCGAGACTGAAGAT
GGTGATATGGCTAGTTTGTCAACTTTGTTTGCAAATAGAAAGAAAGGTCACTTCATGAAA
GGTGATGCAGTTATTATAGTGAAGGGAGATCTAAAAAATTTGAAGGGATGGGTTGAGAAG
GTTGAGGAAGAGAATGTTCACATCAGACCAGAAATGAAGGGTCTTCCAAAAACTCTTGCT
GTAAATGAAAAAGAGCTATGCAAGTACTTTGAACCAGGGAATCATGTGAAGGTTGTCTCT
GGCACACAGGAAGGTGCGACTGGTATGGTTGTTAAGGTTGAGGGCCATGTGCTCATCATT
TTGTCCGATACAACCAAGGAACATCTTCGTGTGTTTGCTGATGATGTTGTGGAGAGCTCA
GAGGTAACTTCTGGTGTCACTAGAATTGGGGACTATGAGCTTCATGATCTCGTGCTGCTG
GACAATCTGAGCTTCGGTGTAATTATACGTGTTGAAAGTGAAGCTTTCCAGGTTCTAAAG
GGAGTTCCAGATAGACCTGAAGTGGTGCTTGTGAAGCTAAGAGAGATAAAATTCAAGATT
GATAAGAGGGTAAATGTCCAAGATCGATTTAAGAACACGGTATCTGTAAAAGATGTTGTT
AGAATTCTTGACGGACCTTGCAAAGGGAAACAAGGTCCAGTTGAACATATATATAAAGGA
GTTCTGTTCATTTATGATCGACATCACCTTGAGCATGCTGGTTTTATTTGCGCTAAATCC
CACTCTTGTGTTGTCGTAGGAGGATCACGCAGTAATGCTGACAGAAGTGGTGATTCCTTC
TCAAGATTTGCCAATCTCAGAACACCACCTCGCGTTCCTGAGTCACCAAGGAGATTCCCT
CGAGGAGGTCGTCCAATGGACTCTGGAGGAAGGCATAGGGGTGGAAGAGGACATGATTCA
TTGATTGGTAGTACAATAAAAATTCGCCAGGGACCTTTTAAGGGTTACCGTGGGCGTGTT
GTTGATGTTAATGGTCAATCTGTTCGGGTTGAATTGGAGTCCCAAATGAAGGTTGTTACA
GTTGATCGGAATCAGATTTCTGATAATGTGGCTGTTGCAACCCCATACCGTGATGCACCT
CGATATGGTATGGGAAGTGAAACACCCATGCATCCTTCACGAACTCCACTGCATCCATAT
ATGACTCCTATGAGGGATGTTGGAGCTACTCCTATACATGATGGTATGAGAACACCCATG
CGGGACCGCGCATGGAATCCTTATGCACCAATGAGTCCTCCAAGGGACAATTGGGAAGAA
GGAAATCCTGACTCTTGGGTAACCACCAGTCCACAGTATCAGCCTGGAAGCCCTCCTTCA
CGAACATATGAAGCACCTACTCCAGGTTCAGGCTGGGCTAGCACTCCTGGTGGCAATTAC
AGTGAAGCTGGAACACCGAGGGATAGTACCCCTGCTTATGCAAATGTTCCCAGTCCTTAC
TTGCCTTCAACTCCTGGTGGACAACCTATGACACCAAATTCAGTATCTTACCTACCAGGT
ACTCCTGGGGGGCAGCCAATGACGCCTGGAACTGGTGTGGATGTTATGTCTCCAATAGGC
GGAGAACAAGAAGGGCCATGGTTTATGCCAGACATATTGGTCCACATACGCAGGCCTGGA
GAAGAGAACACCCTAGGAGTTATCCGGGAGGTGCTTCCGGATGGTACTTATAGAGTGGGC
CTTGGATCCAGTGGTGGGGGTGAAATAGTAACTGTCCTGCATGCTGAAATTGATGCTGTG
GCACCAAGAAAATCAGACAAGATCAAGATTATGGGTGGTGCACATCGTGGTGCCACTGGC
AAGCTGATTGGTGTTGATGGCACTGATGGAATCGTAAAGGTAGATGATACCCTTGATGTT
AAGATATTGGACATGGTTCTCTTGGCAAAACTAGTACAACCATGA

Peptide Sequence

PEP ID

VIT_18s0001g15400.t01
PEP Infomation

pep chromosome:12X:18:13526007:13535458:1 gene:VIT_18s0001g15400 transcript:VIT_18s0001g15400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor SPT5 [Source:UniProtKB/TrEMBL;Acc:E0CQN1]
Sequence

MPRRRHDDDDDDLEPEEDDVLDDDEDYEDEDVGVGSSRKRSRSEFIDDVAEEDDDEDDDD
DDEDFGGSRRGSHRAKRRSGSEFLDLEAAVDSDEEEEEEDGEDDFIVDAGAELPDEDDGQ
RMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVEQQALLPSVRDPKLWMV
KCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNI
YAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLAKVVDVDNVRQRVTVQL
IPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVERRRDPMTGDYFENIGG
MMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDGDMASLSTLFANRKKGHFMK
GDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVS
GTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEVTSGVTRIGDYELHDLVLL
DNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDKRVNVQDRFKNTVSVKDVV
RILDGPCKGKQGPVEHIYKGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSF
SRFANLRTPPRVPESPRRFPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRV
VDVNGQSVRVELESQMKVVTVDRNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPY
MTPMRDVGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDSWVTTSPQYQPGSPPS
RTYEAPTPGSGWASTPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPG
TPGGQPMTPGTGVDVMSPIGGEQEGPWFMPDILVHIRRPGEENTLGVIREVLPDGTYRVG
LGSSGGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDV
KILDMVLLAKLVQP

Transcript Sequence

Transcript ID

VIT_18s0001g15400.t01
Transcript Infomation

cdna chromosome:12X:18:13526007:13535458:1 gene:VIT_18s0001g15400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor SPT5 [Source:UniProtKB/TrEMBL;Acc:E0CQN1]
Sequence

AAGCCTTGACTTATCCAAATATTGTAAATTAGATATTTGGTCTCGGCCCTATTTTTTCAT
AGACGAAGCTCTGAAATTGAAAACCCAACATAGGCAGCATTGTCCGTAAGGCGGTCGCAG
CCCCACACAAGCCCCCGACACCTCCTTACTTACCAGCCTATTAATCCCAAGTTCCCGATA
GCCTTTTAGGGTTCTCAATTACTGAAAGATCCACACCATGCCTCGCCGGAGACACGACGA
CGACGACGATGATCTGGAGCCCGAGGAAGATGATGTTCTCGACGACGACGAAGATTACGA
GGACGAGGACGTCGGAGTCGGTTCAAGTCGCAAGAGGTCGAGATCTGAGTTTATAGATGA
TGTTGCCGAGGAGGACGACGACGAGGATGACGACGACGACGATGAAGATTTTGGAGGTAG
TCGTCGCGGCAGCCACCGGGCCAAGAGGCGGTCTGGCTCCGAGTTTCTGGACCTTGAAGC
TGCGGTCGACAGTGATGAGGAAGAGGAGGAGGAAGACGGCGAGGATGATTTCATTGTTGA
TGCTGGAGCTGAATTACCCGATGAAGATGATGGTCAGAGGATGCGTCGTCGCCCCTTGCT
ACCACAAGAAGACGAGCAAGAAGATTTTGAGGCTCTAGAGAGAAAGATTCAGGAAAGATA
TGGTAAGTCAAGTCATGCAGAATATGATGAGGAGACCACGGAGGTAGAACAGCAAGCTCT
TTTGCCATCTGTTAGGGATCCTAAGTTGTGGATGGTGAAATGTGCGATTGGTCATGAGCG
AGAGGCAGCTGTTTGCCTAATGCAGAAATCCATCGATAAAGGACCTGAGGTGCAGATCAG
GTCTGCTATTGCCCTAGATCATCTAAAAAACTATATATATATTGAAGCTGACAAAGAAGC
TCATGTGAAGGAGGCATGCAAAGGTCTACGCAACATATATGCCCAGAAAGTAATGCTTGT
TCCGATTAGAGAAATGACTGATGTACTTTCTGTTGAAAGCAAAGCAGTTGATCTTTCTAG
GAATACTTGGGTCAGAATGAAGATTGGGACATATAAAGGAGATCTGGCAAAAGTAGTTGA
TGTGGACAATGTGCGACAGAGAGTTACTGTGCAACTAATTCCAAGAATTGACTTGCAAGC
TCTTGCAAATAAGCTGGAAGGTAGAGAAGTTGTGACAAAGAAGGCCTTTAAACCTCCTCC
ACGTTTTATGAATGTTGAGGAAGCTAGAGAAATGCATATCCGTGTAGAGCGTAGGCGGGA
TCCGATGACTGGTGATTATTTCGAGAATATAGGTGGTATGATGTTCAAGGATGGTTTCTT
GTATAAAACAGTGTCCATGAAATCAATTAGTGTTCAGAACATACAGCCCACATTTGATGA
ACTTGAGAAATTTCGAACACCTGGCGAGACTGAAGATGGTGATATGGCTAGTTTGTCAAC
TTTGTTTGCAAATAGAAAGAAAGGTCACTTCATGAAAGGTGATGCAGTTATTATAGTGAA
GGGAGATCTAAAAAATTTGAAGGGATGGGTTGAGAAGGTTGAGGAAGAGAATGTTCACAT
CAGACCAGAAATGAAGGGTCTTCCAAAAACTCTTGCTGTAAATGAAAAAGAGCTATGCAA
GTACTTTGAACCAGGGAATCATGTGAAGGTTGTCTCTGGCACACAGGAAGGTGCGACTGG
TATGGTTGTTAAGGTTGAGGGCCATGTGCTCATCATTTTGTCCGATACAACCAAGGAACA
TCTTCGTGTGTTTGCTGATGATGTTGTGGAGAGCTCAGAGGTAACTTCTGGTGTCACTAG
AATTGGGGACTATGAGCTTCATGATCTCGTGCTGCTGGACAATCTGAGCTTCGGTGTAAT
TATACGTGTTGAAAGTGAAGCTTTCCAGGTTCTAAAGGGAGTTCCAGATAGACCTGAAGT
GGTGCTTGTGAAGCTAAGAGAGATAAAATTCAAGATTGATAAGAGGGTAAATGTCCAAGA
TCGATTTAAGAACACGGTATCTGTAAAAGATGTTGTTAGAATTCTTGACGGACCTTGCAA
AGGGAAACAAGGTCCAGTTGAACATATATATAAAGGAGTTCTGTTCATTTATGATCGACA
TCACCTTGAGCATGCTGGTTTTATTTGCGCTAAATCCCACTCTTGTGTTGTCGTAGGAGG
ATCACGCAGTAATGCTGACAGAAGTGGTGATTCCTTCTCAAGATTTGCCAATCTCAGAAC
ACCACCTCGCGTTCCTGAGTCACCAAGGAGATTCCCTCGAGGAGGTCGTCCAATGGACTC
TGGAGGAAGGCATAGGGGTGGAAGAGGACATGATTCATTGATTGGTAGTACAATAAAAAT
TCGCCAGGGACCTTTTAAGGGTTACCGTGGGCGTGTTGTTGATGTTAATGGTCAATCTGT
TCGGGTTGAATTGGAGTCCCAAATGAAGGTTGTTACAGTTGATCGGAATCAGATTTCTGA
TAATGTGGCTGTTGCAACCCCATACCGTGATGCACCTCGATATGGTATGGGAAGTGAAAC
ACCCATGCATCCTTCACGAACTCCACTGCATCCATATATGACTCCTATGAGGGATGTTGG
AGCTACTCCTATACATGATGGTATGAGAACACCCATGCGGGACCGCGCATGGAATCCTTA
TGCACCAATGAGTCCTCCAAGGGACAATTGGGAAGAAGGAAATCCTGACTCTTGGGTAAC
CACCAGTCCACAGTATCAGCCTGGAAGCCCTCCTTCACGAACATATGAAGCACCTACTCC
AGGTTCAGGCTGGGCTAGCACTCCTGGTGGCAATTACAGTGAAGCTGGAACACCGAGGGA
TAGTACCCCTGCTTATGCAAATGTTCCCAGTCCTTACTTGCCTTCAACTCCTGGTGGACA
ACCTATGACACCAAATTCAGTATCTTACCTACCAGGTACTCCTGGGGGGCAGCCAATGAC
GCCTGGAACTGGTGTGGATGTTATGTCTCCAATAGGCGGAGAACAAGAAGGGCCATGGTT
TATGCCAGACATATTGGTCCACATACGCAGGCCTGGAGAAGAGAACACCCTAGGAGTTAT
CCGGGAGGTGCTTCCGGATGGTACTTATAGAGTGGGCCTTGGATCCAGTGGTGGGGGTGA
AATAGTAACTGTCCTGCATGCTGAAATTGATGCTGTGGCACCAAGAAAATCAGACAAGAT
CAAGATTATGGGTGGTGCACATCGTGGTGCCACTGGCAAGCTGATTGGTGTTGATGGCAC
TGATGGAATCGTAAAGGTAGATGATACCCTTGATGTTAAGATATTGGACATGGTTCTCTT
GGCAAAACTAGTACAACCATGATCAACAATAGTGAAAACACAATTTTATAGTGTATATTT
ATTGCTAACTCTCAAATTTCATTGAGGAATCATGTTCATTCACATATACATGGAGGTGTT
TGGATGTTGATTGAGATGG