Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g15270.t01
CDS Infomation

cds chromosome:12X:18:13408234:13413047:1 gene:VIT_18s0001g15270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTTAGTTAGATCTGCAGAGCTATCTGCTAAAGCTTATGGTAATCCCAACCTCTAT
TCATTCAAGGGAAGCAGTACGGGCCCTGGCTTTTCTACTCAAATATTCCGCTCTGATAAG
CGGAATATCGTGTACATGACTGAATCTTACTGTGGTGAGAGTAATGATCCAAAGTACTTA
GTTGACTCTCCAACAGAAGAACTGATACACCCACCTAGTTCTGGCATTTCAGGAAGGCCA
TTTCACCCACAGGGTACCGCTTCTTACCAGCTCATAGCTGATTCTGTTTCCTCCATGACT
CCTGAAGGCTCATTTTTTGAGTCAGACTACTTGGAGTGTGAAAGCCCAGATCAAATCAAT
TACAATGAAGACAAGATGAGATTGAAGCTTCAAGAATTGGAGAGAGCCCTTCTTGATGAT
AATGATGATGATGATGATCAAAGCATGGAGATTGATGCTGATTGGGCTGATCCGATTGGG
AATGAACTCCTCCATGACTCACCCAAGGAGTCTTCATCCTCAGATTCTAACCTAAGTAGC
ATCAGCAGCAACAAAGAAGTATCACTAATACCTACTCGGACCACCAAGCAGTTGCTTTTT
GATTGTGCTGCTGCACTTGCAGAAGGAAACATTGATGGAGCATCAGCCATGATAAGTGAA
CTCCGGCAGAAAGTCTCAATCCAAGGAGATCCTCCACAGAGGATTGCAGCCTACATGGTG
GAAGGTCTTGCAGCTCGCATGGCTTCCTCTGGAAAATGCCTCTATAAAGCTCTGAAATGC
AAAGAGCCCCCATCTTTGGACCGGCTCTCAGCTATGCAGATCCTCTTTGAGGTATGCCCA
TGTTTTAGATTTGGACTTACAGCAGCTAATGGTGCAATCACAGAGACATTTAAAGATGAG
AAGAGAGTTCATATAGTAGATTTTGAAATAAACCAAGGGAGTCAATATATATTGCTGTTA
CAATCGCTTGCAGAACAGGCAGGTAAAAAGCCCCACATTAGGTTAACTGGAGTGGACGAC
CCCGACTCAATCCAGCGTGCTGTAGGGGGCCTAAAAGTCATTGGGCAGAGGCTTGAGAAT
CTAGCAGAAGATCTCAATTTGTCATTTGAATTTCAAGCAGTGGCTTCAAAGACTTCAAAT
GTCACTCCGGGAATGCTCAACTGTAAGCCTGGAGAAGCACTGGTAGTAAACTTTGCTTTC
CAGCTGCACCACATGCCTGATGAGAGCGTCTCAACAGTAAACCAGCGAGATCAGCTTCTC
CGGATGGTTAAGAGCTTGAACCCAAAACTTGTGACTATTGTTGAACAAGACATGCACACA
AACACAGCCCCTTTTTTCCCGAGATTTGTCGAAGCCTACAACTACTACTCATCTATGTTC
GACTCTCTTGATGCAACTCTCCCCAGGGGCAGCCAGGACAGAGTGAATGTTGAAAGACAG
TGCCTGGCACGGGACATAGTTAACATTGTAGCATGTGAGGGTGAAGAAAGAGTAGAACGG
TACGAGGCTGCAGGGAAATGGAGGGCAAGGATGATGATGGCTGGTTTCACTTCATGTCCA
ATGAGTCAGAATGTGAGTGATACAGTCCGGAAACTCATAAGGGAATACAGTGAAAGGTAC
ACAGCAAAGGAGGAAATGGGTGCTCTCCATTTTGGGTGGGAAGATAAGAGCTTGATTTTT
GCTTCAGCATGGAGGTGA

Peptide Sequence

PEP ID

VIT_18s0001g15270.t01
PEP Infomation

pep chromosome:12X:18:13408234:13413047:1 gene:VIT_18s0001g15270 transcript:VIT_18s0001g15270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSLVRSAELSAKAYGNPNLYSFKGSSTGPGFSTQIFRSDKRNIVYMTESYCGESNDPKYL
VDSPTEELIHPPSSGISGRPFHPQGTASYQLIADSVSSMTPEGSFFESDYLECESPDQIN
YNEDKMRLKLQELERALLDDNDDDDDQSMEIDADWADPIGNELLHDSPKESSSSDSNLSS
ISSNKEVSLIPTRTTKQLLFDCAAALAEGNIDGASAMISELRQKVSIQGDPPQRIAAYMV
EGLAARMASSGKCLYKALKCKEPPSLDRLSAMQILFEVCPCFRFGLTAANGAITETFKDE
KRVHIVDFEINQGSQYILLLQSLAEQAGKKPHIRLTGVDDPDSIQRAVGGLKVIGQRLEN
LAEDLNLSFEFQAVASKTSNVTPGMLNCKPGEALVVNFAFQLHHMPDESVSTVNQRDQLL
RMVKSLNPKLVTIVEQDMHTNTAPFFPRFVEAYNYYSSMFDSLDATLPRGSQDRVNVERQ
CLARDIVNIVACEGEERVERYEAAGKWRARMMMAGFTSCPMSQNVSDTVRKLIREYSERY
TAKEEMGALHFGWEDKSLIFASAWR

Transcript Sequence

Transcript ID

VIT_18s0001g15270.t01
Transcript Infomation

cdna chromosome:12X:18:13408234:13413047:1 gene:VIT_18s0001g15270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGAAGAAAAAGTGAAAAACATAATTTGCAAAGGTTGAAGGAAGGAGTTGTGAAATTTC
TCTCGAAGGAAAAAGAACATTGGGTTATAAATACTGATTTCATCTCTGTTGCTTCCTGTT
GAGGTCTTGCTCCTGCTTCAGGCATCCTTGACATTTCGGGGAGATTTCTATTGAGAATTT
GCAGCATCAGGTGCTTATTTAGTGCTTCTTCTCGGCAAAGGAAACACATTTGTTCTTAAG
TTGCAGTTTACCGGGTTTAGCAGAAATTTCACATCAGGCACTAGTGACAGAGGACTCTAA
TTCTAGAGGCAACCAGTTTCCCTTGAAAACTGAGTGATTAAAAGAAAACCATGTCTTTAG
TTAGATCTGCAGAGCTATCTGCTAAAGCTTATGGTAATCCCAACCTCTATTCATTCAAGG
GAAGCAGTACGGGCCCTGGCTTTTCTACTCAAATATTCCGCTCTGATAAGCGGAATATCG
TGTACATGACTGAATCTTACTGTGGTGAGAGTAATGATCCAAAGTACTTAGTTGACTCTC
CAACAGAAGAACTGATACACCCACCTAGTTCTGGCATTTCAGGAAGGCCATTTCACCCAC
AGGGTACCGCTTCTTACCAGCTCATAGCTGATTCTGTTTCCTCCATGACTCCTGAAGGCT
CATTTTTTGAGTCAGACTACTTGGAGTGTGAAAGCCCAGATCAAATCAATTACAATGAAG
ACAAGATGAGATTGAAGCTTCAAGAATTGGAGAGAGCCCTTCTTGATGATAATGATGATG
ATGATGATCAAAGCATGGAGATTGATGCTGATTGGGCTGATCCGATTGGGAATGAACTCC
TCCATGACTCACCCAAGGAGTCTTCATCCTCAGATTCTAACCTAAGTAGCATCAGCAGCA
ACAAAGAAGTATCACTAATACCTACTCGGACCACCAAGCAGTTGCTTTTTGATTGTGCTG
CTGCACTTGCAGAAGGAAACATTGATGGAGCATCAGCCATGATAAGTGAACTCCGGCAGA
AAGTCTCAATCCAAGGAGATCCTCCACAGAGGATTGCAGCCTACATGGTGGAAGGTCTTG
CAGCTCGCATGGCTTCCTCTGGAAAATGCCTCTATAAAGCTCTGAAATGCAAAGAGCCCC
CATCTTTGGACCGGCTCTCAGCTATGCAGATCCTCTTTGAGGTATGCCCATGTTTTAGAT
TTGGACTTACAGCAGCTAATGGTGCAATCACAGAGACATTTAAAGATGAGAAGAGAGTTC
ATATAGTAGATTTTGAAATAAACCAAGGGAGTCAATATATATTGCTGTTACAATCGCTTG
CAGAACAGGCAGGTAAAAAGCCCCACATTAGGTTAACTGGAGTGGACGACCCCGACTCAA
TCCAGCGTGCTGTAGGGGGCCTAAAAGTCATTGGGCAGAGGCTTGAGAATCTAGCAGAAG
ATCTCAATTTGTCATTTGAATTTCAAGCAGTGGCTTCAAAGACTTCAAATGTCACTCCGG
GAATGCTCAACTGTAAGCCTGGAGAAGCACTGGTAGTAAACTTTGCTTTCCAGCTGCACC
ACATGCCTGATGAGAGCGTCTCAACAGTAAACCAGCGAGATCAGCTTCTCCGGATGGTTA
AGAGCTTGAACCCAAAACTTGTGACTATTGTTGAACAAGACATGCACACAAACACAGCCC
CTTTTTTCCCGAGATTTGTCGAAGCCTACAACTACTACTCATCTATGTTCGACTCTCTTG
ATGCAACTCTCCCCAGGGGCAGCCAGGACAGAGTGAATGTTGAAAGACAGTGCCTGGCAC
GGGACATAGTTAACATTGTAGCATGTGAGGGTGAAGAAAGAGTAGAACGGTACGAGGCTG
CAGGGAAATGGAGGGCAAGGATGATGATGGCTGGTTTCACTTCATGTCCAATGAGTCAGA
ATGTGAGTGATACAGTCCGGAAACTCATAAGGGAATACAGTGAAAGGTACACAGCAAAGG
AGGAAATGGGTGCTCTCCATTTTGGGTGGGAAGATAAGAGCTTGATTTTTGCTTCAGCAT
GGAGGTGACTGGTGTCTAGATTATTCAGTTGCAGATATCGCTACAGCATCTGGCTTGCCT
AGGTATTGTTTTGGCTGCGTATGAACTATATTTCTATGTAGGATCAGTATATATTGCGTT
GCCACTTTATTTAACGTAGAATTAGGATATAAGGAGATGT