Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14980.t01
CDS Infomation

cds chromosome:12X:18:12992480:12996562:1 gene:VIT_18s0001g14980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCCTGGTTCACAAGGTCTGGAAACATTGCCCACCATGTCAAGAGAAACATGGGC
TCCTTCCTCCGACCAGCTCCGACTCTGAGCGACTCTTCTTGGAGTCGTTCACCCGCATGC
CTCGGAAACTCCCCCGCCCTGCTCTGGGCTGGGCGTTTGGAATCCACTAGAGCTCAGAAA
CTTGTTGATTCAGATTCTGAGAATGATGCCCCCCTCCGAGATGATGATCAGGCCATAGAT
TTTCCAGGAGGGAGGGTGATGCTTACTTCTGAAATGCAATTTATCCCAGGTTACCCTCAA
CAGAGGGTCCACTGTTATCATCTTATGAATAACGACGGCCAAACAAATATGTGCAGCAGT
TTTGAACAGGTAAGCAAGGAAGTTGCAGTGAAGATGTACAGCGACATGATCACCCTTCAA
ATAATGGACACCATCTTCTATGAAGCACAGAGGCAAGGAAGAATTTCCTTTTATCTCACA
TCAGTTGGAGAAGAAGCCATCAACATTGCATCTGCAGCTGCACTCTCTCCAGATGATATT
GTCATGGCACAGTACCGGGAGCCTGGAGTTCTGCTGTGGCGTGGTTTCACACTGCAAGAA
TTTGCCAACCAGTGTTTCGGAAACAAGGCTGATTGTGGCAAAGGCAGGCAGATGCCCATC
CATTATGGGTCTAAGAAGCTCAACTACTTCACTGTGTCATCGCCCCTTGCCACACAACTT
CCCCAAGCCGTGGGTGCTGCTTATTCACTTAAAATGGATAACAAGGATGCATGTGTAGTG
GCATACTTTGGGGATGGTAGCACCAGTGAGGGTGATTTCCATGCCAGTCTAAATTTTGCT
GCTGTGATGGAAGCTCCTGTTATTTTTCTGTGTCGCAACAATGGATGGGCCATCAGTACC
CCTACATCAGAACAGTTTCGAAGTGATGGCATTGTTGTCAAGGGTCCGGCGTATGGAATC
CAAAGCATCAGGGTAGATGGGAATGATGCTCTAGCTGTTCATAACGCAGTTCGTGCGGCT
CGTCAAATGGCGATTCACGAACAGAGGCCTATACTAGTTGAGGCCCTTACATATCGGGTA
GGACACCACTCTACATCGGATGACTCCACCAAGTATCGGCCGGTTGATGAGGTTAAGCAC
TGGGAAATGGGTCAAAACCCTGTAAATAGATTCAGAAAATGGGTTGAAAGGAATGGGTGG
TGGAGCGAGGAAGATGAGTCTCAGCTCCGGAGCAGCATCAGGAAGCAGCTACTGCAAGCA
ATTCAAGTTGCAGAAAAAATGGAGAAACCCCCACTTGCAGACTTGTTCAGTGATGTTTAT
GATGTTCCACCATCGATCCTCTTCGAGCAGGAACAGCAGCTTAGAGAAACTATCAAGAGG
CACCCACAAGACTATCCCTCTGATGTTCCTGTTTAG

Peptide Sequence

PEP ID

VIT_18s0001g14980.t01
PEP Infomation

pep chromosome:12X:18:12992480:12996562:1 gene:VIT_18s0001g14980 transcript:VIT_18s0001g14980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAWFTRSGNIAHHVKRNMGSFLRPAPTLSDSSWSRSPACLGNSPALLWAGRLESTRAQK
LVDSDSENDAPLRDDDQAIDFPGGRVMLTSEMQFIPGYPQQRVHCYHLMNNDGQTNMCSS
FEQVSKEVAVKMYSDMITLQIMDTIFYEAQRQGRISFYLTSVGEEAINIASAAALSPDDI
VMAQYREPGVLLWRGFTLQEFANQCFGNKADCGKGRQMPIHYGSKKLNYFTVSSPLATQL
PQAVGAAYSLKMDNKDACVVAYFGDGSTSEGDFHASLNFAAVMEAPVIFLCRNNGWAIST
PTSEQFRSDGIVVKGPAYGIQSIRVDGNDALAVHNAVRAARQMAIHEQRPILVEALTYRV
GHHSTSDDSTKYRPVDEVKHWEMGQNPVNRFRKWVERNGWWSEEDESQLRSSIRKQLLQA
IQVAEKMEKPPLADLFSDVYDVPPSILFEQEQQLRETIKRHPQDYPSDVPV

Transcript Sequence

Transcript ID

VIT_18s0001g14980.t01
Transcript Infomation

cdna chromosome:12X:18:12992480:12996562:1 gene:VIT_18s0001g14980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTTCATTGCATATCATCTCCCCGTTTTCTCCTCCTCTTGGGTATACAAGTAAGTTTTC
GGTTTGTCCCCCTTTTCATTTGGGATGGCGGCCTGGTTCACAAGGTCTGGAAACATTGCC
CACCATGTCAAGAGAAACATGGGCTCCTTCCTCCGACCAGCTCCGACTCTGAGCGACTCT
TCTTGGAGTCGTTCACCCGCATGCCTCGGAAACTCCCCCGCCCTGCTCTGGGCTGGGCGT
TTGGAATCCACTAGAGCTCAGAAACTTGTTGATTCAGATTCTGAGAATGATGCCCCCCTC
CGAGATGATGATCAGGCCATAGATTTTCCAGGAGGGAGGGTGATGCTTACTTCTGAAATG
CAATTTATCCCAGGTTACCCTCAACAGAGGGTCCACTGTTATCATCTTATGAATAACGAC
GGCCAAACAAATATGTGCAGCAGTTTTGAACAGGTAAGCAAGGAAGTTGCAGTGAAGATG
TACAGCGACATGATCACCCTTCAAATAATGGACACCATCTTCTATGAAGCACAGAGGCAA
GGAAGAATTTCCTTTTATCTCACATCAGTTGGAGAAGAAGCCATCAACATTGCATCTGCA
GCTGCACTCTCTCCAGATGATATTGTCATGGCACAGTACCGGGAGCCTGGAGTTCTGCTG
TGGCGTGGTTTCACACTGCAAGAATTTGCCAACCAGTGTTTCGGAAACAAGGCTGATTGT
GGCAAAGGCAGGCAGATGCCCATCCATTATGGGTCTAAGAAGCTCAACTACTTCACTGTG
TCATCGCCCCTTGCCACACAACTTCCCCAAGCCGTGGGTGCTGCTTATTCACTTAAAATG
GATAACAAGGATGCATGTGTAGTGGCATACTTTGGGGATGGTAGCACCAGTGAGGGTGAT
TTCCATGCCAGTCTAAATTTTGCTGCTGTGATGGAAGCTCCTGTTATTTTTCTGTGTCGC
AACAATGGATGGGCCATCAGTACCCCTACATCAGAACAGTTTCGAAGTGATGGCATTGTT
GTCAAGGGTCCGGCGTATGGAATCCAAAGCATCAGGGTAGATGGGAATGATGCTCTAGCT
GTTCATAACGCAGTTCGTGCGGCTCGTCAAATGGCGATTCACGAACAGAGGCCTATACTA
GTTGAGGCCCTTACATATCGGGTAGGACACCACTCTACATCGGATGACTCCACCAAGTAT
CGGCCGGTTGATGAGGTTAAGCACTGGGAAATGGGTCAAAACCCTGTAAATAGATTCAGA
AAATGGGTTGAAAGGAATGGGTGGTGGAGCGAGGAAGATGAGTCTCAGCTCCGGAGCAGC
ATCAGGAAGCAGCTACTGCAAGCAATTCAAGTTGCAGAAAAAATGGAGAAACCCCCACTT
GCAGACTTGTTCAGTGATGTTTATGATGTTCCACCATCGATCCTCTTCGAGCAGGAACAG
CAGCTTAGAGAAACTATCAAGAGGCACCCACAAGACTATCCCTCTGATGTTCCTGTTTAG
GCCATACTCGTGAATGAAATTC