Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14840.t01
CDS Infomation

cds chromosome:12X:18:12887405:12890179:-1 gene:VIT_18s0001g14840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGGCTTATCCACTCCTCTTCTTCCCTCCTTTCCAAACCCTTTCTAAAACCCGCC
CATTCTCCCCACCGCCTCTCCCGAAACGACGCCCTTCCATTCCGGCTTTCCTTTCTTAAG
CGTCCTTATTTCGTCCAACTTGGCTCGGCTTTCTGTGCTCTCGAGAATTCATCCTCTTCT
TCTTCTTCTTCTTCCTTTCGCCGCCTCAAATTTCATGCTCATTGCTCGAAGAAGGGGCCG
TCGTTTTCTTCTTCCCCCGATCCAGATGTTTCGTCGACACCCGGATCTCATTTTCTCAAG
CGCATAGTGGGAGCTGCTTCGAATCAACAAAAGGTCATCACTGCTGGAGCAGTACTACTA
GTGTCAGCTCTCTTTGTGCTCTTAGTCCACCCAATTATTACTTCTTCAGCATATGCTACT
GGGTTCTCTGCTGCTTCTGCTGTCAATGGAAAAATCGTTCGTACTGAGCTGCTAAGTAGT
GCTTGGACTGGCTTCTTTGCTGGTTGCTTACACACACTGTCAGGACCAGACCACCTTGCT
GCTTTGGCTCCACTTTCTATTGGGCGCACCAGGGTGGAGAGTGCTCTAGTTGGAGCACTT
TGGGGCTGTGGCCATGATGCTGGGCAATTGATTTTTGGTTTGCTGTTTCTACTACTCAAG
GATCGGCTTCATATAGAGATTCTCCGCACATGGGGCACAAGAGTGGTAGGCTTCACCTTA
CTCGTTATTGGTGCCATGGGAATAAGGGAAGCATCAGAGTCTCCTGCACCTTGTGTTGTC
CTGGAAAATGGCGAGTGTGATGTTAGCATGTATGATTCCCTCGAAGCTCCAGTTGTTGGA
AAGAAGAAAATTGGGTTTGCAACTTTTGCTACCGGCATTGTTCATGGATTACAACCAGAT
GCCCTAATGATCATCTTACCAGCACTTGCCTTACCTTCACGCATAGCTGGTGCTGCCTTT
CTGGGTATGTTCTTGATTGGAACGGTAGTTGCAATGGGAAGTTACACGGTGTTTATAGGT
TCATGCAGCCAGGCATTAAAAGAAAGGGTCCCTAGAGTAACCGAGAAACTGACTTGGGCT
TCTTCACTTGTAGCAATTGCTCTTGGACTTGCCATCATTTTCAGCCAGTTTTTTGGGTTC
AGCCTTTATTGA

Peptide Sequence

PEP ID

VIT_18s0001g14840.t01
PEP Infomation

pep chromosome:12X:18:12887405:12890179:-1 gene:VIT_18s0001g14840 transcript:VIT_18s0001g14840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERLIHSSSSLLSKPFLKPAHSPHRLSRNDALPFRLSFLKRPYFVQLGSAFCALENSSSS
SSSSSFRRLKFHAHCSKKGPSFSSSPDPDVSSTPGSHFLKRIVGAASNQQKVITAGAVLL
VSALFVLLVHPIITSSAYATGFSAASAVNGKIVRTELLSSAWTGFFAGCLHTLSGPDHLA
ALAPLSIGRTRVESALVGALWGCGHDAGQLIFGLLFLLLKDRLHIEILRTWGTRVVGFTL
LVIGAMGIREASESPAPCVVLENGECDVSMYDSLEAPVVGKKKIGFATFATGIVHGLQPD
ALMIILPALALPSRIAGAAFLGMFLIGTVVAMGSYTVFIGSCSQALKERVPRVTEKLTWA
SSLVAIALGLAIIFSQFFGFSLY

Transcript Sequence

Transcript ID

VIT_18s0001g14840.t01
Transcript Infomation

cdna chromosome:12X:18:12887405:12890179:-1 gene:VIT_18s0001g14840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAGCACACAAATACTCGTGCTCAGCACAAGACAACACGCGCAGAGGTCCATTCTCAATA
TCCTCTATATCCCCGCCTTACCTACAGTTTTCAGACAGGCTTGCCTAGCCCACCGAGAGA
GGCGCTATGGAGAGGCTTATCCACTCCTCTTCTTCCCTCCTTTCCAAACCCTTTCTAAAA
CCCGCCCATTCTCCCCACCGCCTCTCCCGAAACGACGCCCTTCCATTCCGGCTTTCCTTT
CTTAAGCGTCCTTATTTCGTCCAACTTGGCTCGGCTTTCTGTGCTCTCGAGAATTCATCC
TCTTCTTCTTCTTCTTCTTCCTTTCGCCGCCTCAAATTTCATGCTCATTGCTCGAAGAAG
GGGCCGTCGTTTTCTTCTTCCCCCGATCCAGATGTTTCGTCGACACCCGGATCTCATTTT
CTCAAGCGCATAGTGGGAGCTGCTTCGAATCAACAAAAGGTCATCACTGCTGGAGCAGTA
CTACTAGTGTCAGCTCTCTTTGTGCTCTTAGTCCACCCAATTATTACTTCTTCAGCATAT
GCTACTGGGTTCTCTGCTGCTTCTGCTGTCAATGGAAAAATCGTTCGTACTGAGCTGCTA
AGTAGTGCTTGGACTGGCTTCTTTGCTGGTTGCTTACACACACTGTCAGGACCAGACCAC
CTTGCTGCTTTGGCTCCACTTTCTATTGGGCGCACCAGGGTGGAGAGTGCTCTAGTTGGA
GCACTTTGGGGCTGTGGCCATGATGCTGGGCAATTGATTTTTGGTTTGCTGTTTCTACTA
CTCAAGGATCGGCTTCATATAGAGATTCTCCGCACATGGGGCACAAGAGTGGTAGGCTTC
ACCTTACTCGTTATTGGTGCCATGGGAATAAGGGAAGCATCAGAGTCTCCTGCACCTTGT
GTTGTCCTGGAAAATGGCGAGTGTGATGTTAGCATGTATGATTCCCTCGAAGCTCCAGTT
GTTGGAAAGAAGAAAATTGGGTTTGCAACTTTTGCTACCGGCATTGTTCATGGATTACAA
CCAGATGCCCTAATGATCATCTTACCAGCACTTGCCTTACCTTCACGCATAGCTGGTGCT
GCCTTTCTGGGTATGTTCTTGATTGGAACGGTAGTTGCAATGGGAAGTTACACGGTGTTT
ATAGGTTCATGCAGCCAGGCATTAAAAGAAAGGGTCCCTAGAGTAACCGAGAAACTGACT
TGGGCTTCTTCACTTGTAGCAATTGCTCTTGGACTTGCCATCATTTTCAGCCAGTTTTTT
GGGTTCAGCCTTTATTGACTTATCTTATAGTCTTCGGGACAAAGCCCCTTACAAAGTTGC
GCAAGGAACTCTCCATCTCCACAAGAATCTTCATCCATCTTTTCTTTCTTACTTGGAAGT
TCATATTTCATACTCAAAGAATCTCTTTTAGGATTTTCATGGAACACGATGTAGCTTTAT
ATATGATAGCTCAGATAGACTTGCATATTTCTTGTGACTATTGTCCCAATCAGAGTATAG
TTCTCTTC