Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14540.t01
CDS Infomation

cds chromosome:12X:18:12545280:12566106:1 gene:VIT_18s0001g14540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCAAGTTTCGTATTCGAAGTCCCCAGCGACGAAGAACCCGAGTACGAACCTGAC
GAGGATGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGCAGCACAGACCGCCTCTCAATCT
CCATGGGACTTCGCTTCATACTCCGAGACTGTTGCCGAAGAACACGCTCGTCGAAGCACA
ACCTCAGTCGATTTCAAGATCTCCAAAGCGCTTGAGCAACGTCGTCTCCCAATCCCCAAC
CAAGACGATAGCTCCGAATCCGAATCTGACCACCAAGAGGATTATACGCCCGAAGACGCT
GACGAGGCGGCCAGTGTCGGCGGTGACCGCAAGTCCTTCTTTGCTCCTGCTGATGGAGCT
TCTTTTCATGCCAATTCGTTCTTGGAGCTTAACCTCTCTCGACCGTTGCTTCGAGCTTGC
GAAGCTTTGGGATACACTAAACCCACCCCAATTCAGGCAGCCTGCATACCAATAGCTTTA
ACTGGGCGAGATATTTGTGGGAGCGCCATTACTGGCTCTGGCAAGACGGCTGCCTTTTCC
TTACCTACATTAGAGAGGTTATTGTTCCGTCCAAAACGTGTGCAAGCAATCAGGGTCCTT
GTTCTTACTCCAACCAGAGAGTTGGCTGTTCAGGTCCATAGTATGATGGAAAAACTCGCT
CAATTTACTGATATCCGATGTTGCCTGATAGTTGGAGGGCTTTCATCAAAGATGCAAGAG
ACAGCTTTGAGATCAATGCCTGATGTTGTTGTGGCTACCCCGGGACGGATGATAGATCAT
TTACGCAATTCCATGTCTGTGGATTTGGAAGATCTTGCAGTTCTAATCCTTGATGAGGCA
GATCGCCTTCTGGAGCTTGGATTTAATGCTGAAATTCGTGAACTGGTTCGCTTATGTCCT
AAACGGAGGCAGACCATGCTATTTTCAGCTACGATGACTGAAGAAGTTGATGAGCTAGTC
AAGCTTTCTATGACCAAACCAATGCGCCTTGCTGCTGATCCATCCACGAAACGGCCAGCA
ACATTGACAGAAGAGGTGGTACGGATACGGCGAATGAGAGAAGTAAATCAGGAGGCAGTT
CTTCTTGCGTTGTGCTCCAAGACCTTCACAGCAAAAGCGATTATCTTCAGTGGAACCAAA
CAAGCTGCACATAGGTTGAAGATTTTGTTTGGATTGGCTGGCTTTAAGGCTGCTGAGCTT
CATGGAAATCTTACACAAGTCCAGCGTCTTGATGCTTTGGAACTTTTCAGGAAGCAGCAA
GTTGATTTTTTGATTGCAACAGATGTTGCCGCTCGTGGACTTGACATAATTGGTGTTCAA
ACAGTTATAAACTATGCATGTCCTCGTGATCTTACCAGTTACGTTCATCGTGTTGGTCGT
ACAGCAAGGGCTGGTAGAGAAGGATATGCTGTTACATTTGTAACTGATAATGATAGATCT
CTCTTGAAATCTATAGTGAAGAGAGCTGGTTCAAAGCTGAGGAGCCGAATTGTTGCAGAG
CAATCTATAATTAAGTGGTCTCATATGATTGAACAAATGGAAGATCAAGTTGCTGCCATT
CTCCAGGAAGAGAGGGAAGAGAGAATCCTCAGAAAAGCTGAAATGGAAGCAACAAAGGCT
GAAAACATGATTGCCCATAAGGATGATATCTACTCACGCCCTAAAAGAACCTGGTTTGCA
ACAGAAAAGGAGAAGAAGTCTGTGGCAAAGGCAGCAAAGGATTCTCTAGAAAAGGAAAAT
GGTTCTGGGAATAATGTAATCAGTGCCCAACAAGCTGAAGACCTCAAAATGAAGGAAAAG
AGGAAAAGAGAACGAGAGAAAAATTTGCCACGGAAGAAGCGGCGAAAACTGGAAGCAGCT
AGAGAGAGATTGGAGGATGAAAATCAAATTCACAAGTTAAAAGAAGGGGGCAGGGAAAAT
AAGAAAGAAAAGGCTGGAATCTCACTTGTAGGCATAGGTTATAGACGGGCAAAAGCAGTG
AAGGCTGTAAAGAAGGCACAAGATGCTGGCAAGATTGGGAGGAAGGCCAATAAAAAATCA
GAACGGCCTTCTCAAACAAATCAATCAAGGACAGAAGAGATGCAGGAGCTGTTCCAGAGT
GACATGAGTGAGAGAAAGCAGAAAAGAAGCATTCGTGGTGCTGGAAAGAAAAAGTCCAAG
AATTCATTTAAAAGCAAGTCACGATACAAGCGCAAGTAA

Peptide Sequence

PEP ID

VIT_18s0001g14540.t01
PEP Infomation

pep chromosome:12X:18:12545280:12566106:1 gene:VIT_18s0001g14540 transcript:VIT_18s0001g14540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSSFVFEVPSDEEPEYEPDEDEEEEEGEGEGAAQTASQSPWDFASYSETVAEEHARRST
TSVDFKISKALEQRRLPIPNQDDSSESESDHQEDYTPEDADEAASVGGDRKSFFAPADGA
SFHANSFLELNLSRPLLRACEALGYTKPTPIQAACIPIALTGRDICGSAITGSGKTAAFS
LPTLERLLFRPKRVQAIRVLVLTPTRELAVQVHSMMEKLAQFTDIRCCLIVGGLSSKMQE
TALRSMPDVVVATPGRMIDHLRNSMSVDLEDLAVLILDEADRLLELGFNAEIRELVRLCP
KRRQTMLFSATMTEEVDELVKLSMTKPMRLAADPSTKRPATLTEEVVRIRRMREVNQEAV
LLALCSKTFTAKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQ
VDFLIATDVAARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRS
LLKSIVKRAGSKLRSRIVAEQSIIKWSHMIEQMEDQVAAILQEEREERILRKAEMEATKA
ENMIAHKDDIYSRPKRTWFATEKEKKSVAKAAKDSLEKENGSGNNVISAQQAEDLKMKEK
RKREREKNLPRKKRRKLEAARERLEDENQIHKLKEGGRENKKEKAGISLVGIGYRRAKAV
KAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELFQSDMSERKQKRSIRGAGKKKSK
NSFKSKSRYKRK

Transcript Sequence

Transcript ID

VIT_18s0001g14540.t01
Transcript Infomation

cdna chromosome:12X:18:12545280:12566106:1 gene:VIT_18s0001g14540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGCAGCGTCCGTGGTTTTCCCGTTTCTCTCATCCCATGGATTCAAGTTTCGTATTCGAA
GTCCCCAGCGACGAAGAACCCGAGTACGAACCTGACGAGGATGAAGAAGAAGAAGAAGGA
GAAGGAGAAGGAGCAGCACAGACCGCCTCTCAATCTCCATGGGACTTCGCTTCATACTCC
GAGACTGTTGCCGAAGAACACGCTCGTCGAAGCACAACCTCAGTCGATTTCAAGATCTCC
AAAGCGCTTGAGCAACGTCGTCTCCCAATCCCCAACCAAGACGATAGCTCCGAATCCGAA
TCTGACCACCAAGAGGATTATACGCCCGAAGACGCTGACGAGGCGGCCAGTGTCGGCGGT
GACCGCAAGTCCTTCTTTGCTCCTGCTGATGGAGCTTCTTTTCATGCCAATTCGTTCTTG
GAGCTTAACCTCTCTCGACCGTTGCTTCGAGCTTGCGAAGCTTTGGGATACACTAAACCC
ACCCCAATTCAGGCAGCCTGCATACCAATAGCTTTAACTGGGCGAGATATTTGTGGGAGC
GCCATTACTGGCTCTGGCAAGACGGCTGCCTTTTCCTTACCTACATTAGAGAGGTTATTG
TTCCGTCCAAAACGTGTGCAAGCAATCAGGGTCCTTGTTCTTACTCCAACCAGAGAGTTG
GCTGTTCAGGTCCATAGTATGATGGAAAAACTCGCTCAATTTACTGATATCCGATGTTGC
CTGATAGTTGGAGGGCTTTCATCAAAGATGCAAGAGACAGCTTTGAGATCAATGCCTGAT
GTTGTTGTGGCTACCCCGGGACGGATGATAGATCATTTACGCAATTCCATGTCTGTGGAT
TTGGAAGATCTTGCAGTTCTAATCCTTGATGAGGCAGATCGCCTTCTGGAGCTTGGATTT
AATGCTGAAATTCGTGAACTGGTTCGCTTATGTCCTAAACGGAGGCAGACCATGCTATTT
TCAGCTACGATGACTGAAGAAGTTGATGAGCTAGTCAAGCTTTCTATGACCAAACCAATG
CGCCTTGCTGCTGATCCATCCACGAAACGGCCAGCAACATTGACAGAAGAGGTGGTACGG
ATACGGCGAATGAGAGAAGTAAATCAGGAGGCAGTTCTTCTTGCGTTGTGCTCCAAGACC
TTCACAGCAAAAGCGATTATCTTCAGTGGAACCAAACAAGCTGCACATAGGTTGAAGATT
TTGTTTGGATTGGCTGGCTTTAAGGCTGCTGAGCTTCATGGAAATCTTACACAAGTCCAG
CGTCTTGATGCTTTGGAACTTTTCAGGAAGCAGCAAGTTGATTTTTTGATTGCAACAGAT
GTTGCCGCTCGTGGACTTGACATAATTGGTGTTCAAACAGTTATAAACTATGCATGTCCT
CGTGATCTTACCAGTTACGTTCATCGTGTTGGTCGTACAGCAAGGGCTGGTAGAGAAGGA
TATGCTGTTACATTTGTAACTGATAATGATAGATCTCTCTTGAAATCTATAGTGAAGAGA
GCTGGTTCAAAGCTGAGGAGCCGAATTGTTGCAGAGCAATCTATAATTAAGTGGTCTCAT
ATGATTGAACAAATGGAAGATCAAGTTGCTGCCATTCTCCAGGAAGAGAGGGAAGAGAGA
ATCCTCAGAAAAGCTGAAATGGAAGCAACAAAGGCTGAAAACATGATTGCCCATAAGGAT
GATATCTACTCACGCCCTAAAAGAACCTGGTTTGCAACAGAAAAGGAGAAGAAGTCTGTG
GCAAAGGCAGCAAAGGATTCTCTAGAAAAGGAAAATGGTTCTGGGAATAATGTAATCAGT
GCCCAACAAGCTGAAGACCTCAAAATGAAGGAAAAGAGGAAAAGAGAACGAGAGAAAAAT
TTGCCACGGAAGAAGCGGCGAAAACTGGAAGCAGCTAGAGAGAGATTGGAGGATGAAAAT
CAAATTCACAAGTTAAAAGAAGGGGGCAGGGAAAATAAGAAAGAAAAGGCTGGAATCTCA
CTTGTAGGCATAGGTTATAGACGGGCAAAAGCAGTGAAGGCTGTAAAGAAGGCACAAGAT
GCTGGCAAGATTGGGAGGAAGGCCAATAAAAAATCAGAACGGCCTTCTCAAACAAATCAA
TCAAGGACAGAAGAGATGCAGGAGCTGTTCCAGAGTGACATGAGTGAGAGAAAGCAGAAA
AGAAGCATTCGTGGTGCTGGAAAGAAAAAGTCCAAGAATTCATTTAAAAGCAAGTCACGA
TACAAGCGCAAGTAACAGTATCAAGTTTTTGGTCCTACGGATGCTGTAAATTATCACCTT
TAAAGGGAATGGGTCCAATGGAACATTTGGTGGGCGCTACTGCTGCGACCTGTTCAGCCA
TATATCACACATTCTTCTGAGCCTGAAATTCTCGAGTCTGGTCAATCCTAACCAAACCTG
ATAGTGTCAGTTGGGTTCCCATGTGGTGTTTAGGCTCAATTTTCACCTTGTTCTGGGTTC
CTCATCACACTCCTCCTGAAGTTTGTACTCTATGAAGTCAAGATTTTTTCATATCTGATT
ATTGGTGAATTTTGAATTATTTGTTCAAACATTTGGGTTATTATCTCATACTCGTTCCCA
TGAATTTTGTGTCTCCTGAATGTAATCTCTTCATATTATCAGTGAATTTTGAATTATTTA
TGATGCCATATA