Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14450.t01
CDS Infomation

cds chromosome:12X:18:12453766:12456583:1 gene:VIT_18s0001g14450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:E0CQ75]
Sequence

ATGGCTACCGCTGTCAATGCTGCAGTCTCTCTTCCATCATCGAAGTCATCTTCTCTCCCC
ATCAGAAACCATATAATAGTCTCCCCAGAAAGAATTAACTTCAATAAGTGTTTCTTGTAC
TCGAGAAACGTCTGTGTTGGCCGGAAAGTAGTTACCATTAAAGCTCAGGTCACTACAGAG
GCTCCTGCAAAAGTAGAGAAGGTTTCTAAGAAAAACGATGAGGGTGTGGTTGTTAACAAG
TTCAGACCCAAGAATCCTTACATCGGAAAATGTCTCCTCAACACCAAGATTACTGGAGAC
GATGCTCCAGGAGAGACCTGGCACATGGTATTCACCACTGAGGGGGAAGTCCCATATAGA
GAGGGGCAATCTATTGGTGTGATTCCGGATGGTATAGACAAGAATGGGAAACCCCACAAG
CTTAGACTCTACTCTATTGCCAGTAGTGCTCTTGGAGACTTTGGGGACACAAAAACTGTT
TCATTGTGTGTAAAAAGGCTTGTCTACACCAATGACCAAGGAGAGATAGTTAAAGGAGTT
TGCTCAAATTTCTTGTGTGACTTGAAGCCTGGGGCTGATGTCAAAATCACAGGACCTGTT
GGGAAAGAAATGCTTATGCCAAAAGATCCAAATGCCACTGTCATAATGCTTGCAACTGGT
ACTGGCATTGCTCCTTTTCGCTCATTCTTGTGGAAAATGTTCTTCGAGAAATATGAAGAC
TACAAGTTTAAAGGGTTGGGTTGGCTCTTCTTGGGTGTCCCAACAACTAGCTCCCTGCTG
TACAAGGACGAGTTTGAGAAGATGAAGGAGAAGGCCCCAGAAAACTTTAGGGTTGACTAT
GCTGTCAGCAGAGAGCAAACAAATGAGAAGGGCGAGAAAATGTACATTCAAACCCGGATG
GCTCAATATGCAGAGGAGCTATGGGAGTTACTTAAAAAGGATAATACCTATGTGTATATG
TGTGGGCTGAAGGGAATGGAGAAGGGAATTGATGACATAATGGTGTCTTTGGCTGCTAGA
GATGGTATTGATTGGACCGAATACAAAAGGCAATTGAAGAAGAGCGAGCAGTGGAATGTT
GAAGTCTATTGA

Peptide Sequence

PEP ID

VIT_18s0001g14450.t01
PEP Infomation

pep chromosome:12X:18:12453766:12456583:1 gene:VIT_18s0001g14450 transcript:VIT_18s0001g14450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:E0CQ75]
Sequence

MATAVNAAVSLPSSKSSSLPIRNHIIVSPERINFNKCFLYSRNVCVGRKVVTIKAQVTTE
APAKVEKVSKKNDEGVVVNKFRPKNPYIGKCLLNTKITGDDAPGETWHMVFTTEGEVPYR
EGQSIGVIPDGIDKNGKPHKLRLYSIASSALGDFGDTKTVSLCVKRLVYTNDQGEIVKGV
CSNFLCDLKPGADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKYED
YKFKGLGWLFLGVPTTSSLLYKDEFEKMKEKAPENFRVDYAVSREQTNEKGEKMYIQTRM
AQYAEELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAARDGIDWTEYKRQLKKSEQWNV
EVY

Transcript Sequence

Transcript ID

VIT_18s0001g14450.t01
Transcript Infomation

cdna chromosome:12X:18:12453766:12456583:1 gene:VIT_18s0001g14450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:E0CQ75]
Sequence

TCTGCTCTCTTTCGTTTTCTTCGCCAAAAAATCATGGCTACCGCTGTCAATGCTGCAGTC
TCTCTTCCATCATCGAAGTCATCTTCTCTCCCCATCAGAAACCATATAATAGTCTCCCCA
GAAAGAATTAACTTCAATAAGTGTTTCTTGTACTCGAGAAACGTCTGTGTTGGCCGGAAA
GTAGTTACCATTAAAGCTCAGGTCACTACAGAGGCTCCTGCAAAAGTAGAGAAGGTTTCT
AAGAAAAACGATGAGGGTGTGGTTGTTAACAAGTTCAGACCCAAGAATCCTTACATCGGA
AAATGTCTCCTCAACACCAAGATTACTGGAGACGATGCTCCAGGAGAGACCTGGCACATG
GTATTCACCACTGAGGGGGAAGTCCCATATAGAGAGGGGCAATCTATTGGTGTGATTCCG
GATGGTATAGACAAGAATGGGAAACCCCACAAGCTTAGACTCTACTCTATTGCCAGTAGT
GCTCTTGGAGACTTTGGGGACACAAAAACTGTTTCATTGTGTGTAAAAAGGCTTGTCTAC
ACCAATGACCAAGGAGAGATAGTTAAAGGAGTTTGCTCAAATTTCTTGTGTGACTTGAAG
CCTGGGGCTGATGTCAAAATCACAGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGAT
CCAAATGCCACTGTCATAATGCTTGCAACTGGTACTGGCATTGCTCCTTTTCGCTCATTC
TTGTGGAAAATGTTCTTCGAGAAATATGAAGACTACAAGTTTAAAGGGTTGGGTTGGCTC
TTCTTGGGTGTCCCAACAACTAGCTCCCTGCTGTACAAGGACGAGTTTGAGAAGATGAAG
GAGAAGGCCCCAGAAAACTTTAGGGTTGACTATGCTGTCAGCAGAGAGCAAACAAATGAG
AAGGGCGAGAAAATGTACATTCAAACCCGGATGGCTCAATATGCAGAGGAGCTATGGGAG
TTACTTAAAAAGGATAATACCTATGTGTATATGTGTGGGCTGAAGGGAATGGAGAAGGGA
ATTGATGACATAATGGTGTCTTTGGCTGCTAGAGATGGTATTGATTGGACCGAATACAAA
AGGCAATTGAAGAAGAGCGAGCAGTGGAATGTTGAAGTCTATTGATATCAGTTGCATAGG
GGGTTTACAAACATCTATTTACTGAAGAATATCCATTGTTGTATGATTGATTTCTTCCTG
TAGTGGG