Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14380.t01
CDS Infomation

cds chromosome:12X:18:12343090:12350501:-1 gene:VIT_18s0001g14380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTACCGATGCTTTTCCTCCGGTCATAGCTGCGCAGATCAATTATTTGCTTTCTCAT
TCTCCTCTTTCCATTAAGATTGATCAGATGTGGGCTGGTTGCAAGTACTCTGGTTTGCTG
GATCGCTTCTCTTTGCTCATTCCCTTCTGTTTAGATTTCATCAAATGGGATGTCATATAT
AATGCGCAGTGTCCATTGGCTGCTCCAGATGTCATATTTGGACCTGAAGATGAAAATTTT
CATCCATTTTGTGTGACTGGTGATGAAGGGGATTTTAAGTTGTCAAAGAACAGTTTGTCT
GATTGGAATAGCAAGGACCCTTCAGGGTTACTGACTCTTATTCATGAACTGAGGGATCTA
TACTTGTCCTACCAGAAGAAGCGCATTGGAGAAGTTGATGATGATAGACTGAAATTTGAA
ATTAGCACAATTGTATCAAGGGAGGGAATCGAAATGTACATGAGTTCGGGTGTTGAAAAG
CCAGAGGAAGTAAAATTTTCAGTGCCTCTTTTGGACATGGATATAAATAAAATGGTATTT
GGTTGCAACTGGAGACATCAGCAGAAGATATACTTACAGGTTATATTTCCTGTTGGAAGA
AAATATGTGTCTGCCCCTTCAGCTCCACGTTTAAAATTAGTATCTTCTCCTGAATTGAAG
GTTCTCTTTCCTATTGAAGATGTCAAGCTTCCTCCATGGTTGGATGGGATGTGCATGGCT
GAATATCTTCCCAATTTAGAAGAAACACTTGAGAGACAGATCTTGGATGCAGTTTCATTA
ATTGATGTTAGAAGACACTTTATTGAGGCATTGGCACCCGTATTTGGAAGGCCATTAGAA
GCTGATCCGGTGTTTTGCAGAAAAGTTACATTTCTTGCTGCATCTGGGGTGTTTACATGT
CTGGTGCATTTTTTCCTTCCAACGCAGTTCCCAAAGCAACAGCCAGTTTTGATGCTTCAA
AGTTCTCAGCATTTCAATTCCCAAGGTGCACCAATCAAATCACATCTTTTGACAGAGTAT
CCGTGGAGTCCTAGATGGGAATCATCACAAATGGCTGAGCGAATCTTAGAGTTTCTGGTG
GATGAATGTTTGAACTTCAAAAAGTTCTGCAATGAGGCTCAACTTTAG

Peptide Sequence

PEP ID

VIT_18s0001g14380.t01
PEP Infomation

pep chromosome:12X:18:12343090:12350501:-1 gene:VIT_18s0001g14380 transcript:VIT_18s0001g14380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTDAFPPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIY
NAQCPLAAPDVIFGPEDENFHPFCVTGDEGDFKLSKNSLSDWNSKDPSGLLTLIHELRDL
YLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMSSGVEKPEEVKFSVPLLDMDINKMVF
GCNWRHQQKIYLQVIFPVGRKYVSAPSAPRLKLVSSPELKVLFPIEDVKLPPWLDGMCMA
EYLPNLEETLERQILDAVSLIDVRRHFIEALAPVFGRPLEADPVFCRKVTFLAASGVFTC
LVHFFLPTQFPKQQPVLMLQSSQHFNSQGAPIKSHLLTEYPWSPRWESSQMAERILEFLV
DECLNFKKFCNEAQL

Transcript Sequence

Transcript ID

VIT_18s0001g14380.t01
Transcript Infomation

cdna chromosome:12X:18:12343090:12350501:-1 gene:VIT_18s0001g14380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGATCAACCCAGAACTCCGGTCAGCGGTCCGTTGTGAATTGTCGCAGCACTATCAACGG
AGATCATGACTACCGATGCTTTTCCTCCGGTCATAGCTGCGCAGATCAATTATTTGCTTT
CTCATTCTCCTCTTTCCATTAAGATTGATCAGATGTGGGCTGGTTGCAAGTACTCTGGTT
TGCTGGATCGCTTCTCTTTGCTCATTCCCTTCTGTTTAGATTTCATCAAATGGGATGTCA
TATATAATGCGCAGTGTCCATTGGCTGCTCCAGATGTCATATTTGGACCTGAAGATGAAA
ATTTTCATCCATTTTGTGTGACTGGTGATGAAGGGGATTTTAAGTTGTCAAAGAACAGTT
TGTCTGATTGGAATAGCAAGGACCCTTCAGGGTTACTGACTCTTATTCATGAACTGAGGG
ATCTATACTTGTCCTACCAGAAGAAGCGCATTGGAGAAGTTGATGATGATAGACTGAAAT
TTGAAATTAGCACAATTGTATCAAGGGAGGGAATCGAAATGTACATGAGTTCGGGTGTTG
AAAAGCCAGAGGAAGTAAAATTTTCAGTGCCTCTTTTGGACATGGATATAAATAAAATGG
TATTTGGTTGCAACTGGAGACATCAGCAGAAGATATACTTACAGGTTATATTTCCTGTTG
GAAGAAAATATGTGTCTGCCCCTTCAGCTCCACGTTTAAAATTAGTATCTTCTCCTGAAT
TGAAGGTTCTCTTTCCTATTGAAGATGTCAAGCTTCCTCCATGGTTGGATGGGATGTGCA
TGGCTGAATATCTTCCCAATTTAGAAGAAACACTTGAGAGACAGATCTTGGATGCAGTTT
CATTAATTGATGTTAGAAGACACTTTATTGAGGCATTGGCACCCGTATTTGGAAGGCCAT
TAGAAGCTGATCCGGTGTTTTGCAGAAAAGTTACATTTCTTGCTGCATCTGGGGTGTTTA
CATGTCTGGTGCATTTTTTCCTTCCAACGCAGTTCCCAAAGCAACAGCCAGTTTTGATGC
TTCAAAGTTCTCAGCATTTCAATTCCCAAGGTGCACCAATCAAATCACATCTTTTGACAG
AGTATCCGTGGAGTCCTAGATGGGAATCATCACAAATGGCTGAGCGAATCTTAGAGTTTC
TGGTGGATGAATGTTTGAACTTCAAAAAGTTCTGCAATGAGGCTCAACTTTAGCAGCACT
ACTGCAGTGGCTTCACTTGTAATGTTTCTTCTGCCATCCTATATAGTATAGCAATCGTGT
AAAGTTGGCTTCAATTTATACTTTTTGTTGTTGTTCTTTCATATGACTGAACTTTTTTTT
TTTTTTTTTTTATATGACTGGATTAAAATGATTTCCCCTTGTGAGAGCTTTTCAGTTCCA
ACGTTTGGTTGAGGGAAATGAAAAAAAGACTGAAATTATATGCTCCTAATA