Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14290.t01
CDS Infomation

cds chromosome:12X:18:12292329:12294516:-1 gene:VIT_18s0001g14290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCCAATTCCCATGGATGTGTATTCAAATGGAAATGTGAAAAATCTTGAGACAGCA
TCCACCACTGTTCAAATTGATGACTCTGATTTTTTGAGGTTATTGGACAGACCCAGACCC
ATCAGCATAGAAAGGAATAGATCATTTGAAGAGAAGTCATTCAATGAATTGTCTTCCACT
CTATCGCCCCTTCTTTTTCATAGAAATGTGGAGAAGAACTCCTTCCACATATTTGACCTT
CTTGATCACACATTTTCTCCTGTTAGGTCCAGTTTGAACACACCCAGATCAAACCATTGC
TTTGAGCCACATCCTGTGTTCACTGATGCATGGGAGGCTTTGAGGCGTTCACTGGTTTAC
TTCCGTGGACAACCGGTTGGGACCATCGCTGCGATCGACCATTCTTCTGATGAACTTAAC
TATGATCAGGTGTTTGTGAGAGACTTTGTCCCTAGTGCTTTGGCTTTCTTGATGAATGGA
GAACCTGAAATAGTTAAGAATTTTATCTTGAAAACTCTTCGTCTCCAATCATGGGAGAAA
AAGGTTGACCAGTTCAAGCTAGGAGAAGGAGTAATGCCAGCAAGCTTTAAAGTATTTCAC
GACCCTGTGAGGAACTATGAGACCCTAATTGCAGATTTTGGCGAGAGTGCAATTGGAAGA
GTGGCGCCTGTTGATTCTGGATTTTGGTGGATCATATTACTTCGTGCCTATACAAAGTCC
ACAGGGGACTCTTCCTTAGCTGAGATGCCTGAGTGCCAAAGGGGCATGCGTCTTATCCTG
AGTCTATGTCTTTCAGAAGGCTTTGATACATATCCAACTCTTCTCTGTGCGGATGGCTGT
TGTATGATTGACCGCAGAATGGGTGTATATGGGTATCCTATTGAAATACAAGCACTTTTC
TTTATGGCTTTAAGATGTGCATTGCTTTTGCTTAAGCAAGATGATAAGGGCAAGGAGTTC
GTGGAGCTAATATCTAAACGCCTCCATGCTTTAAGCTACCACATGCAAAGCTACTTTTGG
CTGGACATAAAGCAGCTCAATGATATATATCGGTATAAAACAGAGGAGTACTCCCATACA
GCAGTTAATAAATTCAATGTAATGCCCGATTCTCTTCCGGATTGGGTGTTTGATTTCATG
CCAAGTCGTGGTGGTTACTTCATCGGAAATGTAAGTCCTGCGAAAATGGATTTCCGTTGG
TTTTGCCTGGGAAATTGTGTTGCAATCTTGTCGTCTTTGGCAACTCCTGAGCAATCTTCA
GCCATCATGGATCTTATTGAATCACGCTGGCAAGAGTTGGTTGGAGAAATGCCACTTAAG
ATCTGTTATCCAGCCTTTGAAAGTCATGAATGGAGAATTGTCACTGGCTGTGACCCTAAG
AATACAAGGTGGAGTTACCACAATGGTGGATCCTGGCCAGTGCTTATATGGCTTCTTACC
GCCGCATGTATTAAGACTGGACGTCCACAGATTGCAAGACGAGCCATTGAACTAGCTGAG
AGCCGGTTGTTAAAAGATAACTGGCCGGAGTATTATGATGGCAAACTTGGTCGGTATATT
GGAAAGCAGGCTCGAAAGTTCCAGACCTGGTCCATTGCTGGCTACTTGGTGGCTAAGATG
ATGCTTGATGATCCATCTCATTTGGGCATGATATCTCTGGAAGAAGATAAACAGCTGAAG
CCCCTTTTTAAAAGATCCTTGTCATGGTCCCATTGA

Peptide Sequence

PEP ID

VIT_18s0001g14290.t01
PEP Infomation

pep chromosome:12X:18:12292329:12294516:-1 gene:VIT_18s0001g14290 transcript:VIT_18s0001g14290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPIPMDVYSNGNVKNLETASTTVQIDDSDFLRLLDRPRPISIERNRSFEEKSFNELSST
LSPLLFHRNVEKNSFHIFDLLDHTFSPVRSSLNTPRSNHCFEPHPVFTDAWEALRRSLVY
FRGQPVGTIAAIDHSSDELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEK
KVDQFKLGEGVMPASFKVFHDPVRNYETLIADFGESAIGRVAPVDSGFWWIILLRAYTKS
TGDSSLAEMPECQRGMRLILSLCLSEGFDTYPTLLCADGCCMIDRRMGVYGYPIEIQALF
FMALRCALLLLKQDDKGKEFVELISKRLHALSYHMQSYFWLDIKQLNDIYRYKTEEYSHT
AVNKFNVMPDSLPDWVFDFMPSRGGYFIGNVSPAKMDFRWFCLGNCVAILSSLATPEQSS
AIMDLIESRWQELVGEMPLKICYPAFESHEWRIVTGCDPKNTRWSYHNGGSWPVLIWLLT
AACIKTGRPQIARRAIELAESRLLKDNWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKM
MLDDPSHLGMISLEEDKQLKPLFKRSLSWSH

Transcript Sequence

Transcript ID

VIT_18s0001g14290.t01
Transcript Infomation

cdna chromosome:12X:18:12292329:12294516:-1 gene:VIT_18s0001g14290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCCAATTCCCATGGATGTGTATTCAAATGGAAATGTGAAAAATCTTGAGACAGCA
TCCACCACTGTTCAAATTGATGACTCTGATTTTTTGAGGTTATTGGACAGACCCAGACCC
ATCAGCATAGAAAGGAATAGATCATTTGAAGAGAAGTCATTCAATGAATTGTCTTCCACT
CTATCGCCCCTTCTTTTTCATAGAAATGTGGAGAAGAACTCCTTCCACATATTTGACCTT
CTTGATCACACATTTTCTCCTGTTAGGTCCAGTTTGAACACACCCAGATCAAACCATTGC
TTTGAGCCACATCCTGTGTTCACTGATGCATGGGAGGCTTTGAGGCGTTCACTGGTTTAC
TTCCGTGGACAACCGGTTGGGACCATCGCTGCGATCGACCATTCTTCTGATGAACTTAAC
TATGATCAGGTGTTTGTGAGAGACTTTGTCCCTAGTGCTTTGGCTTTCTTGATGAATGGA
GAACCTGAAATAGTTAAGAATTTTATCTTGAAAACTCTTCGTCTCCAATCATGGGAGAAA
AAGGTTGACCAGTTCAAGCTAGGAGAAGGAGTAATGCCAGCAAGCTTTAAAGTATTTCAC
GACCCTGTGAGGAACTATGAGACCCTAATTGCAGATTTTGGCGAGAGTGCAATTGGAAGA
GTGGCGCCTGTTGATTCTGGATTTTGGTGGATCATATTACTTCGTGCCTATACAAAGTCC
ACAGGGGACTCTTCCTTAGCTGAGATGCCTGAGTGCCAAAGGGGCATGCGTCTTATCCTG
AGTCTATGTCTTTCAGAAGGCTTTGATACATATCCAACTCTTCTCTGTGCGGATGGCTGT
TGTATGATTGACCGCAGAATGGGTGTATATGGGTATCCTATTGAAATACAAGCACTTTTC
TTTATGGCTTTAAGATGTGCATTGCTTTTGCTTAAGCAAGATGATAAGGGCAAGGAGTTC
GTGGAGCTAATATCTAAACGCCTCCATGCTTTAAGCTACCACATGCAAAGCTACTTTTGG
CTGGACATAAAGCAGCTCAATGATATATATCGGTATAAAACAGAGGAGTACTCCCATACA
GCAGTTAATAAATTCAATGTAATGCCCGATTCTCTTCCGGATTGGGTGTTTGATTTCATG
CCAAGTCGTGGTGGTTACTTCATCGGAAATGTAAGTCCTGCGAAAATGGATTTCCGTTGG
TTTTGCCTGGGAAATTGTGTTGCAATCTTGTCGTCTTTGGCAACTCCTGAGCAATCTTCA
GCCATCATGGATCTTATTGAATCACGCTGGCAAGAGTTGGTTGGAGAAATGCCACTTAAG
ATCTGTTATCCAGCCTTTGAAAGTCATGAATGGAGAATTGTCACTGGCTGTGACCCTAAG
AATACAAGGTGGAGTTACCACAATGGTGGATCCTGGCCAGTGCTTATATGGCTTCTTACC
GCCGCATGTATTAAGACTGGACGTCCACAGATTGCAAGACGAGCCATTGAACTAGCTGAG
AGCCGGTTGTTAAAAGATAACTGGCCGGAGTATTATGATGGCAAACTTGGTCGGTATATT
GGAAAGCAGGCTCGAAAGTTCCAGACCTGGTCCATTGCTGGCTACTTGGTGGCTAAGATG
ATGCTTGATGATCCATCTCATTTGGGCATGATATCTCTGGAAGAAGATAAACAGCTGAAG
CCCCTTTTTAAAAGATCCTTGTCATGGTCCCATTGATATCGTATATCTATTTTTCT