Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g14180.t01
CDS Infomation	cds chromosome:12X:18:12216225:12219253:-1 gene:VIT_18s0001g14180 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CQ50]
Sequence	ATGGTGATGGATGGCGAGGTCGAAGAAGGCGGAGGAGGACAAGTGGTGGAGACTGGGGAG GAGGAGACTGCTCCCAATGCGTCCAACACTCAAGGGTGCACCTGTGAGGTTCAAGAACTG ATGGTCGTGATTGGGTCCATTGTAGCCATTGGAGATTATAGGAGGACGCAGAAGAAGGAG TGCCAAAACCTAGTAAGGCGGTTGAAGTTATTGTTGCCGCTTTTAGAAGATGTAAAGGAC CTCCATGGCCAAGTTCCCGAGAAGTCTTTAAATCCATTCTGGAATTTGAAGAAGGCGCTT CTACGTGTCAAGAAACTCTTGATAACTTGCAGTGAGGGAAGCAAGATTTATCTGGCACTT GAGAATGAAGCAGTCATGGCTAGATTTCATCGTGCCAATGAAAAATTAAGTCAAGCTTTG GAAGATTTGCCTTATGAAGAGCTTGGAGTCTCAGAGGAAGTAAAAGAAGAGCTTGATTTA GTGCGCATGCACCTCAAACGATCCAAGAGGCGAACAGACACTCAGGATATTGAACTTGCA ATGGATATGATGGTGGTATTCTCAAAAGACGATGAACGGAATGCGGATAGTGCAATAATA GTGAGGCTGGCAAAGAAGCTGGAACTGCTTACAGTTGAGGACTTGAATGCAGAAACAATA GCTGTAAGAAAACTTGTGAAAGAAAGAGGAGGACAAAATGCAGAGAGTACCCAGCATGTG ATTGAACTTCTGAATAAATTCAGACAAAGTGGAGGGCTTGAAGAGATCAATGTGCTTGAT GATCCCATTGTGCCCAAAACTCTTGAGAAATCCCCATCTTTGGCTATCCCTCATGAGTTC CTCTGCCCAATCACATTAGAAATAATGACTGATCCTGTTTTTGTAGCAACTGGACAGACA TATGAAAGAGAAAGCATACAGAAGTGGTTGGACTCCAACCATAAAACCTGTCCAAAGACA ATGCAACCTTTGGTTCACTCCTCGCTTGTGCCAAACTATGCCCTCAGAAACCTGATCCTT CAGTGGTGTGAGAACAATAATTTTCAAATTCCCAAAAAGGATGCTTCTTCAAGCACTGAG GGCTCCTCTGAGCAGAAAGAGTCTGTCTTGTCTGTGGTTCAAAACCTATCCTCTAATCAA TTGGAAGTGCAGAGAAAAGCAGCGAAGAAGATCCGAATGCTCTCGAAAGAGAATCCAGTG AACCGAGTTCTGATTGCCCAGAGTGGAGGAATCCCACCATTAGTGCAACTCCTGTCCTAT CCAGATTCCAAGATTCAAGAGCACACTGTAACAGCTCTGTTGAACTTGTCAATTGATGAG GCCAACAAGAAACTCATTGCTATAGAAGGAGCCATTCCAGCTATAATAGATGTCCTACGG AAAGGAAGCGTTGAGGCTAAAGGGAACTCTGCAGCGGCATTATTCAGTTTGTCGATAGAT GATGATATTAAAGCAGCAATCGGGCTCTCTAATGGCATCCCGCCGTTGGTGGATTTGTTG CAGCATGGGACAATCAGAGGCAAAAGGGATGCTGCCACAGCACTCTTTAACCTCTCTCTC AACAAGGCAAATAAGACCAGGGCCATTGAGGCTGGTGTTATTCCACCTTTACTCCAGTTA ATTAAGAGCCCAAACTCGGGCATGATTGACGAGGCCCTCTCTATCTTGTTCCTCCTGGCA TCACATCCGGACGGGCGGCAAGAGATTGGACAGCTCTCAGTCATTGAAACTCTTGTTGAG TTTATCAGAGATGGGACCACCAAGAACAAAGAATGCGCCACATCGGTTCTTCTTGAGCTG GGGTCTAGCAATTCCTCTTTCATTTTGGCTGCACTTCAGTATGGTGTGTTAGAGCATTTG ATTGAGATTACAAAGAGCGGAAACAGCAGAGCCCAAAGGAAAGCTAACTCACTTTTACAG CTCATGAGTCGAATCAGTTTCTTAAGGCAGATGTGTGCAGTGAATATACTTACTTTTGGC AAGAAGTTTTTACGACACATTCTCCCCACTCGTCTCTTTACAGTTGTTTTCTTGATAGAG AACATGTCTGTGTGA

Peptide Sequence

PEP ID	VIT_18s0001g14180.t01
PEP Infomation	pep chromosome:12X:18:12216225:12219253:-1 gene:VIT_18s0001g14180 transcript:VIT_18s0001g14180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CQ50]
Sequence	MVMDGEVEEGGGGQVVETGEEETAPNASNTQGCTCEVQELMVVIGSIVAIGDYRRTQKKE CQNLVRRLKLLLPLLEDVKDLHGQVPEKSLNPFWNLKKALLRVKKLLITCSEGSKIYLAL ENEAVMARFHRANEKLSQALEDLPYEELGVSEEVKEELDLVRMHLKRSKRRTDTQDIELA MDMMVVFSKDDERNADSAIIVRLAKKLELLTVEDLNAETIAVRKLVKERGGQNAESTQHV IELLNKFRQSGGLEEINVLDDPIVPKTLEKSPSLAIPHEFLCPITLEIMTDPVFVATGQT YERESIQKWLDSNHKTCPKTMQPLVHSSLVPNYALRNLILQWCENNNFQIPKKDASSSTE GSSEQKESVLSVVQNLSSNQLEVQRKAAKKIRMLSKENPVNRVLIAQSGGIPPLVQLLSY PDSKIQEHTVTALLNLSIDEANKKLIAIEGAIPAIIDVLRKGSVEAKGNSAAALFSLSID DDIKAAIGLSNGIPPLVDLLQHGTIRGKRDAATALFNLSLNKANKTRAIEAGVIPPLLQL IKSPNSGMIDEALSILFLLASHPDGRQEIGQLSVIETLVEFIRDGTTKNKECATSVLLEL GSSNSSFILAALQYGVLEHLIEITKSGNSRAQRKANSLLQLMSRISFLRQMCAVNILTFG KKFLRHILPTRLFTVVFLIENMSV

Transcript Sequence

Transcript ID	VIT_18s0001g14180.t01
Transcript Infomation	cdna chromosome:12X:18:12216225:12219253:-1 gene:VIT_18s0001g14180 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CQ50]
Sequence	ATGGTGATGGATGGCGAGGTCGAAGAAGGCGGAGGAGGACAAGTGGTGGAGACTGGGGAG GAGGAGACTGCTCCCAATGCGTCCAACACTCAAGGGTGCACCTGTGAGGTTCAAGAACTG ATGGTCGTGATTGGGTCCATTGTAGCCATTGGAGATTATAGGAGGACGCAGAAGAAGGAG TGCCAAAACCTAGTAAGGCGGTTGAAGTTATTGTTGCCGCTTTTAGAAGATGTAAAGGAC CTCCATGGCCAAGTTCCCGAGAAGTCTTTAAATCCATTCTGGAATTTGAAGAAGGCGCTT CTACGTGTCAAGAAACTCTTGATAACTTGCAGTGAGGGAAGCAAGATTTATCTGGCACTT GAGAATGAAGCAGTCATGGCTAGATTTCATCGTGCCAATGAAAAATTAAGTCAAGCTTTG GAAGATTTGCCTTATGAAGAGCTTGGAGTCTCAGAGGAAGTAAAAGAAGAGCTTGATTTA GTGCGCATGCACCTCAAACGATCCAAGAGGCGAACAGACACTCAGGATATTGAACTTGCA ATGGATATGATGGTGGTATTCTCAAAAGACGATGAACGGAATGCGGATAGTGCAATAATA GTGAGGCTGGCAAAGAAGCTGGAACTGCTTACAGTTGAGGACTTGAATGCAGAAACAATA GCTGTAAGAAAACTTGTGAAAGAAAGAGGAGGACAAAATGCAGAGAGTACCCAGCATGTG ATTGAACTTCTGAATAAATTCAGACAAAGTGGAGGGCTTGAAGAGATCAATGTGCTTGAT GATCCCATTGTGCCCAAAACTCTTGAGAAATCCCCATCTTTGGCTATCCCTCATGAGTTC CTCTGCCCAATCACATTAGAAATAATGACTGATCCTGTTTTTGTAGCAACTGGACAGACA TATGAAAGAGAAAGCATACAGAAGTGGTTGGACTCCAACCATAAAACCTGTCCAAAGACA ATGCAACCTTTGGTTCACTCCTCGCTTGTGCCAAACTATGCCCTCAGAAACCTGATCCTT CAGTGGTGTGAGAACAATAATTTTCAAATTCCCAAAAAGGATGCTTCTTCAAGCACTGAG GGCTCCTCTGAGCAGAAAGAGTCTGTCTTGTCTGTGGTTCAAAACCTATCCTCTAATCAA TTGGAAGTGCAGAGAAAAGCAGCGAAGAAGATCCGAATGCTCTCGAAAGAGAATCCAGTG AACCGAGTTCTGATTGCCCAGAGTGGAGGAATCCCACCATTAGTGCAACTCCTGTCCTAT CCAGATTCCAAGATTCAAGAGCACACTGTAACAGCTCTGTTGAACTTGTCAATTGATGAG GCCAACAAGAAACTCATTGCTATAGAAGGAGCCATTCCAGCTATAATAGATGTCCTACGG AAAGGAAGCGTTGAGGCTAAAGGGAACTCTGCAGCGGCATTATTCAGTTTGTCGATAGAT GATGATATTAAAGCAGCAATCGGGCTCTCTAATGGCATCCCGCCGTTGGTGGATTTGTTG CAGCATGGGACAATCAGAGGCAAAAGGGATGCTGCCACAGCACTCTTTAACCTCTCTCTC AACAAGGCAAATAAGACCAGGGCCATTGAGGCTGGTGTTATTCCACCTTTACTCCAGTTA ATTAAGAGCCCAAACTCGGGCATGATTGACGAGGCCCTCTCTATCTTGTTCCTCCTGGCA TCACATCCGGACGGGCGGCAAGAGATTGGACAGCTCTCAGTCATTGAAACTCTTGTTGAG TTTATCAGAGATGGGACCACCAAGAACAAAGAATGCGCCACATCGGTTCTTCTTGAGCTG GGGTCTAGCAATTCCTCTTTCATTTTGGCTGCACTTCAGTATGGTGTGTTAGAGCATTTG ATTGAGATTACAAAGAGCGGAAACAGCAGAGCCCAAAGGAAAGCTAACTCACTTTTACAG CTCATGAGTCGAATCAGTTTCTTAAGGCAGATGTGTGCAGTGAATATACTTACTTTTGGC AAGAAGTTTTTACGACACATTCTCCCCACTCGTCTCTTTACAGTTGTTTTCTTGATAGAG AACATGTCTGTGTGA