Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14130.t01
CDS Infomation

cds chromosome:12X:18:12179540:12181647:1 gene:VIT_18s0001g14130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGAGAGAGGTAGCTCAGCAACACTTCTCTTCTTCTATCTCCTGGGATTACTTTTC
ATGGCTCTCCTCACTTTCTTACCAGAAGCATCAGAGACCAATACCAAAAAGCAACAGCCT
TCAAAGCGGAAGCGAAAGCAGCAAAAGCAGCCATCATCTTGGAACCAAATCAAGAACCTA
CTCACCTGTAAGCAGATCGAAGGGTCGCAAGTTCACGATCCCTCTAAGAACCCAGGTGGG
TACTCCAAGTTGGGGTCTTCTTGCGGTTCCATATGCAGTTTCAGAGACGTTGTTCACGGC
AACACTAGGGTGGTTCACAGAGCTGACAACTCACCGGAAAGTAGCTCGGTGGGTCAGGAG
ACTGGGCTTCTGAGTAGGAAAACTGTGAGTGGGTCGACGTCGTCGACTCGGTCTCTATCA
AGTTCAGTGAGATCCAACGCTAGTGCTACCTACACGTCCTCTTCCAGAGGCATGCAATTT
AGGAAGCTTTCTGGGTGTTATGAGTGTCACATGATAGTTGATCCAAACAGGTACCCATCT
CCAAGAACAACTATATGTGCTTGCTCTGAGTGTGGAGAGGTTTTTCCAAAGACTGAAAGC
TTAGAGCTTCATCAAGCAGTTCGCCATGCCGTTTCGGAGCTGGGTCCGGAGGATTCGGGT
CGGAACATCGTGGAGATCATCTTTAAATCGAGCTGGTTGAAGAAAGACAATCCAATCTGC
AAGATCGAACGGATACTAAAAGTCCACAACACCCAGAGGACCATCCAACGGTTCGAGGAA
TGCCGAGACGCGGTGAAGGTCCGTGCGAACAATAACACCAAGAAAAACCCGCGCTGTGCC
GCGGACGGAAACGAGCTGCTGCGGTTCCATTGCACCACCTTAACCTGCGCTCTCGGCTCA
CGTGGCTCCTCCAGCCTATGCGGCTCCGTACCGGGCTGCGGAGTATGCACCATCATCAGG
CACGGATTCCAAGGCAAGGCAGGTGAGGCAAAAGGTGTGCGCACCACTGACAGCAGCGGT
CGGGCCCACGACTGCCTACCGTGTACGGACGGTCGCAGGGCCATGTTGGTGTGCCGCGTG
ATCGCCGGAAGGGTGAAGCGCATGGCGGACGATGCGCCGGATGAGGATGGCGCCTCGGCT
GGCTCCTACGACTCAGTAGCCGGCTACTCCGGGATTTACTCGAATCTGGAGGATTTGTTC
GTATTCAATCCCAGGGCCATTCTTCCTTGCTTTGTAGTGATCTACAAAGCTCTTGATTGA

Peptide Sequence

PEP ID

VIT_18s0001g14130.t01
PEP Infomation

pep chromosome:12X:18:12179540:12181647:1 gene:VIT_18s0001g14130 transcript:VIT_18s0001g14130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKERGSSATLLFFYLLGLLFMALLTFLPEASETNTKKQQPSKRKRKQQKQPSSWNQIKNL
LTCKQIEGSQVHDPSKNPGGYSKLGSSCGSICSFRDVVHGNTRVVHRADNSPESSSVGQE
TGLLSRKTVSGSTSSTRSLSSSVRSNASATYTSSSRGMQFRKLSGCYECHMIVDPNRYPS
PRTTICACSECGEVFPKTESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPIC
KIERILKVHNTQRTIQRFEECRDAVKVRANNNTKKNPRCAADGNELLRFHCTTLTCALGS
RGSSSLCGSVPGCGVCTIIRHGFQGKAGEAKGVRTTDSSGRAHDCLPCTDGRRAMLVCRV
IAGRVKRMADDAPDEDGASAGSYDSVAGYSGIYSNLEDLFVFNPRAILPCFVVIYKALD

Transcript Sequence

Transcript ID

VIT_18s0001g14130.t01
Transcript Infomation

cdna chromosome:12X:18:12179540:12181647:1 gene:VIT_18s0001g14130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGCCTCCTTCCCTCCATATTACCAATCTCGGATTCCTCCGCATTGAAGGTTGAAGGGCAC
CTCTGGACCAAAGTTTGGAGTGGCATCTTCTCTCTTTCTCATGAAAGAGAGAGGTAGCTC
AGCAACACTTCTCTTCTTCTATCTCCTGGGATTACTTTTCATGGCTCTCCTCACTTTCTT
ACCAGAAGCATCAGAGACCAATACCAAAAAGCAACAGCCTTCAAAGCGGAAGCGAAAGCA
GCAAAAGCAGCCATCATCTTGGAACCAAATCAAGAACCTACTCACCTGTAAGCAGATCGA
AGGGTCGCAAGTTCACGATCCCTCTAAGAACCCAGGTGGGTACTCCAAGTTGGGGTCTTC
TTGCGGTTCCATATGCAGTTTCAGAGACGTTGTTCACGGCAACACTAGGGTGGTTCACAG
AGCTGACAACTCACCGGAAAGTAGCTCGGTGGGTCAGGAGACTGGGCTTCTGAGTAGGAA
AACTGTGAGTGGGTCGACGTCGTCGACTCGGTCTCTATCAAGTTCAGTGAGATCCAACGC
TAGTGCTACCTACACGTCCTCTTCCAGAGGCATGCAATTTAGGAAGCTTTCTGGGTGTTA
TGAGTGTCACATGATAGTTGATCCAAACAGGTACCCATCTCCAAGAACAACTATATGTGC
TTGCTCTGAGTGTGGAGAGGTTTTTCCAAAGACTGAAAGCTTAGAGCTTCATCAAGCAGT
TCGCCATGCCGTTTCGGAGCTGGGTCCGGAGGATTCGGGTCGGAACATCGTGGAGATCAT
CTTTAAATCGAGCTGGTTGAAGAAAGACAATCCAATCTGCAAGATCGAACGGATACTAAA
AGTCCACAACACCCAGAGGACCATCCAACGGTTCGAGGAATGCCGAGACGCGGTGAAGGT
CCGTGCGAACAATAACACCAAGAAAAACCCGCGCTGTGCCGCGGACGGAAACGAGCTGCT
GCGGTTCCATTGCACCACCTTAACCTGCGCTCTCGGCTCACGTGGCTCCTCCAGCCTATG
CGGCTCCGTACCGGGCTGCGGAGTATGCACCATCATCAGGCACGGATTCCAAGGCAAGGC
AGGTGAGGCAAAAGGTGTGCGCACCACTGACAGCAGCGGTCGGGCCCACGACTGCCTACC
GTGTACGGACGGTCGCAGGGCCATGTTGGTGTGCCGCGTGATCGCCGGAAGGGTGAAGCG
CATGGCGGACGATGCGCCGGATGAGGATGGCGCCTCGGCTGGCTCCTACGACTCAGTAGC
CGGCTACTCCGGGATTTACTCGAATCTGGAGGATTTGTTCGTATTCAATCCCAGGGCCAT
TCTTCCTTGCTTTGTAGTGATCTACAAAGCTCTTGATTGATTGAAAAACTTCTGTACACA
TAACTAATCCAACGGTCAGATCAGTTTGCTGACCTCCCTTTGTCTTGTTTGC