Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g14020.t01
CDS Infomation

cds chromosome:12X:18:12032185:12069047:1 gene:VIT_18s0001g14020 gene_biotype:protein_coding transcript_biotype:protein_coding description:5'-3' exoribonuclease [Source:UniProtKB/TrEMBL;Acc:F6H077]
Sequence

ATGGGAGTACCAGCGTTCTACCGGTGGCTGGCCGAGAAGTATCCGCTGGTGGTGGTGGAT
GTGATCGAAGAAGAACCAGTCGAAATAGATGGCATTTCGATTCCTGTCGACACCAGTAAA
CCTAACCCTAACAACATCGAATACGACAATCTATACCTGGACATGAATGGGATTATTCAC
CCCTGCTTTCATCCTGAAGACCGGCCTTCTCCAACAACTTTTGATGAAGTATTTCAGTGC
ATGTTTGACTACATCGATAGACTTTTTGTGATGGTACGACCCCGAAAGCTTCTGTACATG
GCTATTGATGGTGTTGCTCCAAGGGCTAAAATGAATCAACAACGCTCTAGGCGTTTCAGA
GCAGCCAAAGATGCAGCTGATGCGGCAGCTGAAGAAGAACGGTTACGTGAAGAATTTGAG
AAGGAGGGCAGAAAGCTTCCTCCAAAACAACAGTCCCAAGTTTGTGATTCTAATGTTATC
ACTCCTGGAACTGAATTTATGGGTGTCCTGTCAGTTGCATTGCAGTACTATATTCATCTT
AGACTAAACAATGATCCTGGATGGAAATCTATTAAGGTCATCCTTTCTGATGCAAATGTT
CCTGGTGAAGGGGAACACAAAATAATGTCATATATTCGTCTTCAAAGAAATCTTCCTGGT
TTTGATCCAAATACACGGCATTGTTTGTATGGATTGGATGCAGATCTAATCATGTTGGCT
TTAGCTACACATGAAGTTCATTTTTCAATCCTAAGAGAGATTGTGTTCACTCCTGGACAA
CAAGATAAATGTTTCATGTGCGGTCAAATGGGTCATTTAGCAGCTGATTGTGAAGGAAAG
GCAAAGAGAAAGGCAGGGGAGTTTGATGAGAAAGGACAGTCTGCTAGTGTGGTCAAAAAG
CCATACCAGTTTCTCAACATTTGGACTCTCAGAGAGTATTTGGAATATGAAATGAGAATC
CCTAATCTTCCATTTGAGATTGATTTTGAACACATTGTGGATGACTTTATCTTCATGTGT
TTCTTTGTTGGCAATGATTTTTTGCCACATATGCCCACATTGGAGATCCGTGAGGGTGCA
ATTAATTTGCTGATGGCAGTATACAAGAAGGAACTCAGGGCAATGGGTGGTTATTTGACT
GACTCAAGCAAGCCAAATTTAAGCAATGTGGAGCATTTCATTCAGGCTGTAGGCTCCTAT
GAAGATAAAATATTCCAGAAAAGAGCTCGATTACATCAGCGGCAGGCAGAGAGAATCAAG
CGTGAGAAGGCACAGGCAAGAAGAGGAGATGACGCAGACCCTCAAGTTAAACCTGAATTT
CTGGTTCCTGTTTCTCGGTATCATGGCTCTCGTCTTGCTTCAGCGCCAACACCTTCGCCA
TATCAACAACATGAGATTAAAAGCAAACAGTCTGGGACATCTGGTAGTCAGGGACGTAAA
GTTGCACGTTTTTCTTCAGGAGCCACTGTTGGTGCTGCAATTGTTGAAGCTGAGAATGAT
CTTGAAACAGAATTGCACGATAACAAAGACGAACTGAAAGCAAAGCTGAAGGAGTTACTC
CGCGAGAAATCTGATCTTTTTAACTCCAAAAATCCAGAGGAAGACAAGGTTAAATTGGGA
GAGGCAGGTTGGAAAGAAAGGTATTATGAAGAAAAGTTCTCCACAAAAACTCCTGAGGAA
CAAGAAGCAATGCGGAACGATGTTGTTTTGAAGTACACAGAAGGCCTCTGTTGGGTTATG
CACTATTACTATGAAGGGGTATGTTCTTGGCAATGGTTTTATCCTTATCACTATGCACCA
TTTGCTTCTGATCTCAAAGATCTTGGTCAGTTGAATATAAGCTTTGAACTGGGTTCTCCC
TTCAAACCATTTAATCAGCTATTGGGAGTTTTTCCAGCTGCCAGCTCCCATGCACTTCCT
GAGGAATATAGGAAATTGATGACTGATCCAAACTCACCTATTATTGATTTTTATCCAACA
GATTTTGAGGTGGACATGAATGGCAAACGGTTTGCTTGGCAGGGTATTGCAAAATTGCCT
TTCATTGATGAAGCTCGCCTCCTGGCAGAGGTTCAAAAAATTGAGCACACTTTAACGGAG
GAGGAATTCCGGAGAAACAGCGTGATGTTTGACATGCTTTTTGTGGCTCTATCGCATCCT
CTCTCTCCATATATATTTTCTCTTGATGATCGTTGCAAAAAATTGACCGACAACGAGCGC
ACGGAAGTCAAGGAACAACTTGATCCCAGAGCCAGTGGTGGGATGAATGGTTACATATCC
CTTTGTGGTGGAGATCCTTGCCCTCCTATTTTCAGATCACCTATTGCTAGTTTGGAAGAT
ATTATGGATAACCAAGTCATCTGTGCTATATACAGACTTCCAGATGCTCATAAGCACATT
ACTCGACCACCTGTTGGAGTTACATTCCCAAAGAAGATTGTTAGTGTGGGGGATCTGAAA
CCTGAACCTGTTCTGTGGCATGAAGACAATGGAAGAAGGCCCTGGGAAAATGGAAGACAA
AACCTCCCTGGGACTATTTCTGGTCGACAGCTTGGGGAGGCAGCACATCGGCTTGTTGTT
AATAGCTTACAAGTAAAGGCAGAACGTAATGGCTTTGGCGATCAGATGCACGCTCCACCA
CCTTATCCGGCAGCTCCATATGGTCCACCCCTTTCTTCCTACTCAGATAACAGGTACCAT
AATCAGGAGCATCATAGGATGGCGCTGCCTAGACCAGACTATTCTGATCAAACTTACCGT
AGATCTTCAAACCCTGCTTCTGTAAGAAATCATTTTGACCACAGATATGATCAGCCACAC
GCTTCCTCAGCTACTGGCCATCACTACAATAGGTCCCCTGTACATGGATACTACCAACCA
GGATTTCATCAGAATGATGGACCCGGGTACCATCCTAGACAAGAAGCACAAACTCACATT
CCTGCTGGTGCCCAACTCCCTGGTCAGGGAGGTCACAACAGCCACCACGGTTATCAATCA
TATGGAGCTTCTAGTTATCATGAATGGGCCAGTGGCTGGCCCCCAGAGGGTAATAATCAG
AGCAATCCCAGAGGCCATGGTCACCCTCAGGGCAATCCCAGAGGGTACGGTCATCCTCAA
CAATTAGGCAATCAGTACTCAGTGTTAGACAGAAGGGCAAACAGAGGGCCGCCACCACCT
GGTTATGATCGCCGCTAG

Peptide Sequence

PEP ID

VIT_18s0001g14020.t01
PEP Infomation

pep chromosome:12X:18:12032185:12069047:1 gene:VIT_18s0001g14020 transcript:VIT_18s0001g14020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:5'-3' exoribonuclease [Source:UniProtKB/TrEMBL;Acc:F6H077]
Sequence

MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH
PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL
RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA
LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK
PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA
INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK
REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQSGTSGSQGRK
VARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFNSKNPEEDKVKLG
EAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAP
FASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPNSPIIDFYPT
DFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDMLFVALSHP
LSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCPPIFRSPIASLED
IMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWHEDNGRRPWENGRQ
NLPGTISGRQLGEAAHRLVVNSLQVKAERNGFGDQMHAPPPYPAAPYGPPLSSYSDNRYH
NQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDHRYDQPHASSATGHHYNRSPVHGYYQP
GFHQNDGPGYHPRQEAQTHIPAGAQLPGQGGHNSHHGYQSYGASSYHEWASGWPPEGNNQ
SNPRGHGHPQGNPRGYGHPQQLGNQYSVLDRRANRGPPPPGYDRR

Transcript Sequence

Transcript ID

VIT_18s0001g14020.t01
Transcript Infomation

cdna chromosome:12X:18:12032185:12069047:1 gene:VIT_18s0001g14020 gene_biotype:protein_coding transcript_biotype:protein_coding description:5'-3' exoribonuclease [Source:UniProtKB/TrEMBL;Acc:F6H077]
Sequence

AGCCATGGGAGTACCAGCGTTCTACCGGTGGCTGGCCGAGAAGTATCCGCTGGTGGTGGT
GGATGTGATCGAAGAAGAACCAGTCGAAATAGATGGCATTTCGATTCCTGTCGACACCAG
TAAACCTAACCCTAACAACATCGAATACGACAATCTATACCTGGACATGAATGGGATTAT
TCACCCCTGCTTTCATCCTGAAGACCGGCCTTCTCCAACAACTTTTGATGAAGTATTTCA
GTGCATGTTTGACTACATCGATAGACTTTTTGTGATGGTACGACCCCGAAAGCTTCTGTA
CATGGCTATTGATGGTGTTGCTCCAAGGGCTAAAATGAATCAACAACGCTCTAGGCGTTT
CAGAGCAGCCAAAGATGCAGCTGATGCGGCAGCTGAAGAAGAACGGTTACGTGAAGAATT
TGAGAAGGAGGGCAGAAAGCTTCCTCCAAAACAACAGTCCCAAGTTTGTGATTCTAATGT
TATCACTCCTGGAACTGAATTTATGGGTGTCCTGTCAGTTGCATTGCAGTACTATATTCA
TCTTAGACTAAACAATGATCCTGGATGGAAATCTATTAAGGTCATCCTTTCTGATGCAAA
TGTTCCTGGTGAAGGGGAACACAAAATAATGTCATATATTCGTCTTCAAAGAAATCTTCC
TGGTTTTGATCCAAATACACGGCATTGTTTGTATGGATTGGATGCAGATCTAATCATGTT
GGCTTTAGCTACACATGAAGTTCATTTTTCAATCCTAAGAGAGATTGTGTTCACTCCTGG
ACAACAAGATAAATGTTTCATGTGCGGTCAAATGGGTCATTTAGCAGCTGATTGTGAAGG
AAAGGCAAAGAGAAAGGCAGGGGAGTTTGATGAGAAAGGACAGTCTGCTAGTGTGGTCAA
AAAGCCATACCAGTTTCTCAACATTTGGACTCTCAGAGAGTATTTGGAATATGAAATGAG
AATCCCTAATCTTCCATTTGAGATTGATTTTGAACACATTGTGGATGACTTTATCTTCAT
GTGTTTCTTTGTTGGCAATGATTTTTTGCCACATATGCCCACATTGGAGATCCGTGAGGG
TGCAATTAATTTGCTGATGGCAGTATACAAGAAGGAACTCAGGGCAATGGGTGGTTATTT
GACTGACTCAAGCAAGCCAAATTTAAGCAATGTGGAGCATTTCATTCAGGCTGTAGGCTC
CTATGAAGATAAAATATTCCAGAAAAGAGCTCGATTACATCAGCGGCAGGCAGAGAGAAT
CAAGCGTGAGAAGGCACAGGCAAGAAGAGGAGATGACGCAGACCCTCAAGTTAAACCTGA
ATTTCTGGTTCCTGTTTCTCGGTATCATGGCTCTCGTCTTGCTTCAGCGCCAACACCTTC
GCCATATCAACAACATGAGATTAAAAGCAAACAGTCTGGGACATCTGGTAGTCAGGGACG
TAAAGTTGCACGTTTTTCTTCAGGAGCCACTGTTGGTGCTGCAATTGTTGAAGCTGAGAA
TGATCTTGAAACAGAATTGCACGATAACAAAGACGAACTGAAAGCAAAGCTGAAGGAGTT
ACTCCGCGAGAAATCTGATCTTTTTAACTCCAAAAATCCAGAGGAAGACAAGGTTAAATT
GGGAGAGGCAGGTTGGAAAGAAAGGTATTATGAAGAAAAGTTCTCCACAAAAACTCCTGA
GGAACAAGAAGCAATGCGGAACGATGTTGTTTTGAAGTACACAGAAGGCCTCTGTTGGGT
TATGCACTATTACTATGAAGGGGTATGTTCTTGGCAATGGTTTTATCCTTATCACTATGC
ACCATTTGCTTCTGATCTCAAAGATCTTGGTCAGTTGAATATAAGCTTTGAACTGGGTTC
TCCCTTCAAACCATTTAATCAGCTATTGGGAGTTTTTCCAGCTGCCAGCTCCCATGCACT
TCCTGAGGAATATAGGAAATTGATGACTGATCCAAACTCACCTATTATTGATTTTTATCC
AACAGATTTTGAGGTGGACATGAATGGCAAACGGTTTGCTTGGCAGGGTATTGCAAAATT
GCCTTTCATTGATGAAGCTCGCCTCCTGGCAGAGGTTCAAAAAATTGAGCACACTTTAAC
GGAGGAGGAATTCCGGAGAAACAGCGTGATGTTTGACATGCTTTTTGTGGCTCTATCGCA
TCCTCTCTCTCCATATATATTTTCTCTTGATGATCGTTGCAAAAAATTGACCGACAACGA
GCGCACGGAAGTCAAGGAACAACTTGATCCCAGAGCCAGTGGTGGGATGAATGGTTACAT
ATCCCTTTGTGGTGGAGATCCTTGCCCTCCTATTTTCAGATCACCTATTGCTAGTTTGGA
AGATATTATGGATAACCAAGTCATCTGTGCTATATACAGACTTCCAGATGCTCATAAGCA
CATTACTCGACCACCTGTTGGAGTTACATTCCCAAAGAAGATTGTTAGTGTGGGGGATCT
GAAACCTGAACCTGTTCTGTGGCATGAAGACAATGGAAGAAGGCCCTGGGAAAATGGAAG
ACAAAACCTCCCTGGGACTATTTCTGGTCGACAGCTTGGGGAGGCAGCACATCGGCTTGT
TGTTAATAGCTTACAAGTAAAGGCAGAACGTAATGGCTTTGGCGATCAGATGCACGCTCC
ACCACCTTATCCGGCAGCTCCATATGGTCCACCCCTTTCTTCCTACTCAGATAACAGGTA
CCATAATCAGGAGCATCATAGGATGGCGCTGCCTAGACCAGACTATTCTGATCAAACTTA
CCGTAGATCTTCAAACCCTGCTTCTGTAAGAAATCATTTTGACCACAGATATGATCAGCC
ACACGCTTCCTCAGCTACTGGCCATCACTACAATAGGTCCCCTGTACATGGATACTACCA
ACCAGGATTTCATCAGAATGATGGACCCGGGTACCATCCTAGACAAGAAGCACAAACTCA
CATTCCTGCTGGTGCCCAACTCCCTGGTCAGGGAGGTCACAACAGCCACCACGGTTATCA
ATCATATGGAGCTTCTAGTTATCATGAATGGGCCAGTGGCTGGCCCCCAGAGGGTAATAA
TCAGAGCAATCCCAGAGGCCATGGTCACCCTCAGGGCAATCCCAGAGGGTACGGTCATCC
TCAACAATTAGGCAATCAGTACTCAGTGTTAGACAGAAGGGCAAACAGAGGGCCGCCACC
ACCTGGTTATGATCGCCGCTAGTTGCCCTGAAAAAAGAAATGTTGTACGATATTCAGTTT
TTAATGGCTTAACAGTTTTACCATAATGTTCTTTTTGCCTTTAATTTTGTCAATTCAGTA
GGTTATTGTAGGCCTTCTCATTGATTTGGTTTGGTTTTAAACGATATATTCCTACTGTAA
ATGGCAGTGGCCAAATCTCTTGTAATAAACCGTTTTGAGTGAACGACCTCCCATTCCGAG
AGAGGAGCCATTTGACAATTAGGATTGAAAGTTTTTGTTTAATAGTCATTTGCAATATGT
AACAGAACTTGTT