Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13900.t01
CDS Infomation

cds chromosome:12X:18:11898378:11909253:-1 gene:VIT_18s0001g13900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGCATCGTCTTCGACACAGCAGGTTTCGACTGAACAACGGGAGGCCGAAACCCTA
GCAGCTTCGACTGGAGCTCTTCCAATGCTTCAGAAGTCTTTCTCTAGGCTTTCTAATCCC
GAAACTAAAGCGATTCCCCTGACATCTCTGCAGGAATGCTTCTGTATAGCTTTCAACAAT
GCAAAGTGTGAAGCACCTTATGTTCCTGACTACGTCTTGCAGTTGTTGGATCAACTGGGT
CCATCCATAGTTGACCTATTTTTTGTGGCAGAAAAAGGAGGGATAAGTTGGGTTGAGTTT
GTGAGGGGTTATACTAAATGCTGTGGGAGGATGTCAGCTGCAATGTCCCTTGGTGCTTTG
TTGAGGGTTTTTTCAGTTACGACTGTGAAAGTGGGCATGCCTTCAAAATTGCAGTTTGAA
TCTGATGATGCTGATTGTAAGATAAGTGGCTCCCTCCAGCCAAATGAGTTGCTTGTGCTT
CTTTGGATGTGTTGGATTATGACGTGGAGTTCTAGAATCTCCAAATTCTCCAATGGAAAA
CTGAATCTGGATCTTCCGGATATAAATAATTTAGTATTATCAGCTATTGTGTCATGTACA
GAAGTTGGCAGTGACTTGAATTTATGGGATTGTGATATCACAAGATTGGAAGTGCAACTT
CCTGCAGGAAAAATTCATACCTGGGCCTTGAATACAGTGCCAAATCTTGCAGATTGTTTT
GTGCATTTTGTCCATGTTAAACTCCAAAACACTGCAACTTCAGAGAGTGAGATGGAGGCC
TCAAGTTCATCAGTAAGTGATGTTTCCTCAGCAAAATCATGTGATGCTCATCTTCTAACT
TGTGGGAGGGCGTGGGCTATTTCCCTATCACCGAGAAGTACTATAGGTCAAGAGATTTTA
AGAGTATGTTTCCCTAGAGATGGGGAAGGATCAGAGGAAAGCCTTCTTTATCGGTCATCA
CTTCATGGGAAAGGTTTGAACAGATTCTGGTCAAATATTGAGGGTTATCATGGCCCAATG
TTAATGTTGATTTCTGCCAGTTCAGGAAATTCTGAGGGTAGCACCAATTCCAGGAGATGG
ATCATTGGTGCACTTACTCAGCAGGGTTTCGAAAATAAGGATATGTTTTATGGAAACTCT
GGGAATCTATATGCTATAAGTCCAGTTTTCCATTCATTTTCACCTTCTGGGAAGGAGAAG
AACTTTGTGTATAGTCATTTACATCCTACTGGTAGGGCATATGAGCCACATCCAAAGCCT
GCGGGGATTGCATTTGGTGGAACCATTGGGAATGAGAGAATATTTATTGACGAGGATTTT
GCTAGAGTTACTGTTCGCCATCATGCAGTTGACAAAACTTATCAACCTGGTTCCCTCATC
CCTGATCAGGGGTTTTTACCTGTTGAAGCACGGGTTTTAGATGTGGAAGTATGGGGATTG
GGTGGAAGAACAGCCAGGGAAGTACAAATCTCATTTCAGAAGAGAGAACAACTTTTTACT
GAGCAAAGACGCAAGGTTGACTTGAAAACATTTGCGAGTTGGGATGATTCACCTGAGAAG
ATGATGATGGATGTTATGTCTGATCCTAACAGAGTTAATCGGGAGGACCGCTAA

Peptide Sequence

PEP ID

VIT_18s0001g13900.t01
PEP Infomation

pep chromosome:12X:18:11898378:11909253:-1 gene:VIT_18s0001g13900 transcript:VIT_18s0001g13900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGASSSTQQVSTEQREAETLAASTGALPMLQKSFSRLSNPETKAIPLTSLQECFCIAFNN
AKCEAPYVPDYVLQLLDQLGPSIVDLFFVAEKGGISWVEFVRGYTKCCGRMSAAMSLGAL
LRVFSVTTVKVGMPSKLQFESDDADCKISGSLQPNELLVLLWMCWIMTWSSRISKFSNGK
LNLDLPDINNLVLSAIVSCTEVGSDLNLWDCDITRLEVQLPAGKIHTWALNTVPNLADCF
VHFVHVKLQNTATSESEMEASSSSVSDVSSAKSCDAHLLTCGRAWAISLSPRSTIGQEIL
RVCFPRDGEGSEESLLYRSSLHGKGLNRFWSNIEGYHGPMLMLISASSGNSEGSTNSRRW
IIGALTQQGFENKDMFYGNSGNLYAISPVFHSFSPSGKEKNFVYSHLHPTGRAYEPHPKP
AGIAFGGTIGNERIFIDEDFARVTVRHHAVDKTYQPGSLIPDQGFLPVEARVLDVEVWGL
GGRTAREVQISFQKREQLFTEQRRKVDLKTFASWDDSPEKMMMDVMSDPNRVNREDR

Transcript Sequence

Transcript ID

VIT_18s0001g13900.t01
Transcript Infomation

cdna chromosome:12X:18:11898378:11909253:-1 gene:VIT_18s0001g13900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGCATCGTCTTCGACACAGCAGGTTTCGACTGAACAACGGGAGGCCGAAACCCTA
GCAGCTTCGACTGGAGCTCTTCCAATGCTTCAGAAGTCTTTCTCTAGGCTTTCTAATCCC
GAAACTAAAGCGATTCCCCTGACATCTCTGCAGGAATGCTTCTGTATAGCTTTCAACAAT
GCAAAGTGTGAAGCACCTTATGTTCCTGACTACGTCTTGCAGTTGTTGGATCAACTGGGT
CCATCCATAGTTGACCTATTTTTTGTGGCAGAAAAAGGAGGGATAAGTTGGGTTGAGTTT
GTGAGGGGTTATACTAAATGCTGTGGGAGGATGTCAGCTGCAATGTCCCTTGGTGCTTTG
TTGAGGGTTTTTTCAGTTACGACTGTGAAAGTGGGCATGCCTTCAAAATTGCAGTTTGAA
TCTGATGATGCTGATTGTAAGATAAGTGGCTCCCTCCAGCCAAATGAGTTGCTTGTGCTT
CTTTGGATGTGTTGGATTATGACGTGGAGTTCTAGAATCTCCAAATTCTCCAATGGAAAA
CTGAATCTGGATCTTCCGGATATAAATAATTTAGTATTATCAGCTATTGTGTCATGTACA
GAAGTTGGCAGTGACTTGAATTTATGGGATTGTGATATCACAAGATTGGAAGTGCAACTT
CCTGCAGGAAAAATTCATACCTGGGCCTTGAATACAGTGCCAAATCTTGCAGATTGTTTT
GTGCATTTTGTCCATGTTAAACTCCAAAACACTGCAACTTCAGAGAGTGAGATGGAGGCC
TCAAGTTCATCAGTAAGTGATGTTTCCTCAGCAAAATCATGTGATGCTCATCTTCTAACT
TGTGGGAGGGCGTGGGCTATTTCCCTATCACCGAGAAGTACTATAGGTCAAGAGATTTTA
AGAGTATGTTTCCCTAGAGATGGGGAAGGATCAGAGGAAAGCCTTCTTTATCGGTCATCA
CTTCATGGGAAAGGTTTGAACAGATTCTGGTCAAATATTGAGGGTTATCATGGCCCAATG
TTAATGTTGATTTCTGCCAGTTCAGGAAATTCTGAGGGTAGCACCAATTCCAGGAGATGG
ATCATTGGTGCACTTACTCAGCAGGGTTTCGAAAATAAGGATATGTTTTATGGAAACTCT
GGGAATCTATATGCTATAAGTCCAGTTTTCCATTCATTTTCACCTTCTGGGAAGGAGAAG
AACTTTGTGTATAGTCATTTACATCCTACTGGTAGGGCATATGAGCCACATCCAAAGCCT
GCGGGGATTGCATTTGGTGGAACCATTGGGAATGAGAGAATATTTATTGACGAGGATTTT
GCTAGAGTTACTGTTCGCCATCATGCAGTTGACAAAACTTATCAACCTGGTTCCCTCATC
CCTGATCAGGGGTTTTTACCTGTTGAAGCACGGGTTTTAGATGTGGAAGTATGGGGATTG
GGTGGAAGAACAGCCAGGGAAGTACAAATCTCATTTCAGAAGAGAGAACAACTTTTTACT
GAGCAAAGACGCAAGGTTGACTTGAAAACATTTGCGAGTTGGGATGATTCACCTGAGAAG
ATGATGATGGATGTTATGTCTGATCCTAACAGAGTTAATCGGGAGGACCGCTAATCAGGA
GAGTACAAGTTCAAGCTTCAAGTGACTGGCTTAGAGAAAATGATTATGTAAGTGAGAATT
TATTAGGACAATACATGTATTTAGGAAATGATTCCTTTGTAACTCTAAGTTGTGACTGTA
CAGAATGAAGGTAGACATCTAAATTATGTTTTTAAAAGTGTCAACTAGCATCCGAATCCT
GGTCCTGGTTGTATTGGAAGATTTTCCTGTTCCATGCACGATCCTTCTGCTTTGCCCCAA
ACTCTGCTAGCCAAACCTGAATTGTCGACATGCATTTGAGCAGTGGTTTG