Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13870.t01
CDS Infomation

cds chromosome:12X:18:11862607:11871541:1 gene:VIT_18s0001g13870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGATCAGCTTCTTGCTTCAAAATCATTTCTTGCGGTGGCGATTCCGTCGGCCAA
GATGAGCTCGACCTCGCTGAGCGCAAGGGTTATAGTGATAAACGTGGGTGGAGTTTCCGG
AAGAGATCTGCCAGGCATCGAGTTCTAAGCAACACTGTGGTTTCAGAAATTCCTTCTTCT
GGGAATAAGGAGAGCCCAGAATCTGCGGCTATTAACTTTCAAACACCAGTTGACTCTACC
ATACCCGAGAAAACTTCTGTTCCGCAATGGGCAGATGAGAAACCCCAGTTATCGACTTCA
TTTAACTCAAAAGCATCCGAGACTGTTGTTGCTTCAGAGAATGAAAGTAAGGTTGATGTC
AATGTGGATGAGTCTGCTGCTATTGCAATTCAGGCCGCTGTCAGAGGATTCTTGGCTCAA
AGAGCACTCCTAAAGCTTAAGAATGTAATCAAGTTGCAAGCTGCTGTCCGGGGGCATTTG
GTTCGGAGGCATGCTGTGGGAACCCTACGTGTAGTTCAGGCCATTGTTAAAATCCAAGCT
CTTGTTCGTGCTCGCCGAGTTCAAGCAGGGAAGTTAGATGATCGGAAAGATAAACCTAGT
TCCAAGCCCATGGAAAAGGAAAATTCATCAGCTGACCCATCTGCAACATACACTTCTATT
GACAAGCTTCTTAGCAATGGCTTTGCCCGTCAGCTACTGGAATCAAATCCAAGAACCAAG
TCTATCCACATTAAATGTGATCCTTCAAGACCTAATTCTGGATGGCAATGGTTGGAGAGG
TGGATGTCTGTCTCATCATCAAATCTTGGACAACCACAGATACCAGTGTTGGAGAAAGAG
GAACTGGAACATGAGAGAGTTGAGAATTCTGCTGTCCAAGTAGAAACTGGAATTACATCT
GAAACAACCAGTGAGTCTGAAGATTTGAAGTCTAATGTTAGGGAAACAGCAGTGCCATCT
GAAAGTGAAGAGAATTTAATCACTTATGATGCAGAGAGCTTTGACTTTCAGACATGCTGC
CCTACCTCTTCTTCGGTAAAGGACAATCTTGAGCTACCTCCATCAGAGAATACAGGTGGT
ACATCACATGCAAAAGACTCCCCATCAGAGATAGATTTGCTCCCAAATCACACGATGCAA
CCAGAAGAAAAATCTCTAACAGAGTTCAATTCTGTTTCTGGTAAGTCTGAAATGGAAAGT
GAACAACCCAAACGTTCTGTTAAAAGGTTTGCCTCTGAACAACTGGAGACTGAAGGGAAG
AAGTTTGTATTTGGATCGAGGAAGGTGAGTAATCCTGCATTTGTTGCTGCCCAGTCAAAA
TTTGAAGAGCTGAGTTCTACAGCCAATTCAGGTAGATTAATCAGTCCTTCCCATCAAGAT
GTTGGAGTTGAATCAAACATCGAGACAGTTTCATCTGCAGCTGATACCTCAATCACGACA
AAGGATCTTAACAGCGAAGATAATTCAATTCCACCTAATTCAAGGCTTCAAGTTGGTGGC
TCTGAATGTGGCACTGAACTTTCTATTACTTCTACTCTTGATTCACCTGATATATCCGAA
GTTGGAGCCATGGAATTTGACAATGAAGCCAAAGTCTCAGAAGAAGTGATTTGCAATCTC
AACAGCACTGGAGGCCTTGATGTTGAATCCAAGGATGTGTCCACCATCGCAGTGTCTAAT
TTATCTGACACTATGTTGGCTCCACCAGAGAAACGTGATGCTGTTAATGGTGAACCTGTT
AATTCAGTTGTAGATGTGGACTCCTCACAGGTAAAGCAGAAGCCAGAGAGAACTGCATCT
GATCTGCAGATAGAACTGGACCCTCAGACAGGCCGTCAAGCATACAGGTCATCACCAGAA
GCTTCTCCAAGGAGCCACATCACTGTTCCCGAGTCCCAAGGAACACCTTCCAGCCAGGTA
TCAGTGAAAGCTAAAAGGAGCAAAACTGATAAAAGTGGGTCCAACCAAAAGCGTGCATCT
CTGTCAGCAGGTAAGAGATCCCCTTCAAATCCAAACCATGATTCTGGTGCAAGGAGTAGC
ATGGAACAATTGCCTAAAGATCAGAAAACTGGGAAGAGACGCAATTCTTTTGGTTCAACA
AGACCTGATAATGTTGATCAGGAACCGAGAGATAGTAGTAGCAGTAATTCTCTGCCCAGT
TACATGCAAGCCACAGAGTCTGCAAGAGCCAAGCTCCATGCAAATAACTCTCCCAGATCA
AGTCCAGATGTGCAAGACAAGGACATTTACATCAAGAAGAGGCACTCCCTGCCTGGTGCA
AATGGAAGGCAGGGATCTCCTCGCATCCAGAGATCTATGTCTCAAGCTCAGCAGGGTGCA
AAGGGAAATAGTGCTAATCCTCCCCATGGTATTTTCTGA

Peptide Sequence

PEP ID

VIT_18s0001g13870.t01
PEP Infomation

pep chromosome:12X:18:11862607:11871541:1 gene:VIT_18s0001g13870 transcript:VIT_18s0001g13870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRSASCFKIISCGGDSVGQDELDLAERKGYSDKRGWSFRKRSARHRVLSNTVVSEIPSS
GNKESPESAAINFQTPVDSTIPEKTSVPQWADEKPQLSTSFNSKASETVVASENESKVDV
NVDESAAIAIQAAVRGFLAQRALLKLKNVIKLQAAVRGHLVRRHAVGTLRVVQAIVKIQA
LVRARRVQAGKLDDRKDKPSSKPMEKENSSADPSATYTSIDKLLSNGFARQLLESNPRTK
SIHIKCDPSRPNSGWQWLERWMSVSSSNLGQPQIPVLEKEELEHERVENSAVQVETGITS
ETTSESEDLKSNVRETAVPSESEENLITYDAESFDFQTCCPTSSSVKDNLELPPSENTGG
TSHAKDSPSEIDLLPNHTMQPEEKSLTEFNSVSGKSEMESEQPKRSVKRFASEQLETEGK
KFVFGSRKVSNPAFVAAQSKFEELSSTANSGRLISPSHQDVGVESNIETVSSAADTSITT
KDLNSEDNSIPPNSRLQVGGSECGTELSITSTLDSPDISEVGAMEFDNEAKVSEEVICNL
NSTGGLDVESKDVSTIAVSNLSDTMLAPPEKRDAVNGEPVNSVVDVDSSQVKQKPERTAS
DLQIELDPQTGRQAYRSSPEASPRSHITVPESQGTPSSQVSVKAKRSKTDKSGSNQKRAS
LSAGKRSPSNPNHDSGARSSMEQLPKDQKTGKRRNSFGSTRPDNVDQEPRDSSSSNSLPS
YMQATESARAKLHANNSPRSSPDVQDKDIYIKKRHSLPGANGRQGSPRIQRSMSQAQQGA
KGNSANPPHGIF

Transcript Sequence

Transcript ID

VIT_18s0001g13870.t01
Transcript Infomation

cdna chromosome:12X:18:11862607:11871541:1 gene:VIT_18s0001g13870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACATAGGGTAAGCAGAGTCACTTCAGAGGCCAGTCTGAGAGAGAGGAAGCAAAATGGGAA
GATCAGCTTCTTGCTTCAAAATCATTTCTTGCGGTGGCGATTCCGTCGGCCAAGATGAGC
TCGACCTCGCTGAGCGCAAGGGTTATAGTGATAAACGTGGGTGGAGTTTCCGGAAGAGAT
CTGCCAGGCATCGAGTTCTAAGCAACACTGTGGTTTCAGAAATTCCTTCTTCTGGGAATA
AGGAGAGCCCAGAATCTGCGGCTATTAACTTTCAAACACCAGTTGACTCTACCATACCCG
AGAAAACTTCTGTTCCGCAATGGGCAGATGAGAAACCCCAGTTATCGACTTCATTTAACT
CAAAAGCATCCGAGACTGTTGTTGCTTCAGAGAATGAAAGTAAGGTTGATGTCAATGTGG
ATGAGTCTGCTGCTATTGCAATTCAGGCCGCTGTCAGAGGATTCTTGGCTCAAAGAGCAC
TCCTAAAGCTTAAGAATGTAATCAAGTTGCAAGCTGCTGTCCGGGGGCATTTGGTTCGGA
GGCATGCTGTGGGAACCCTACGTGTAGTTCAGGCCATTGTTAAAATCCAAGCTCTTGTTC
GTGCTCGCCGAGTTCAAGCAGGGAAGTTAGATGATCGGAAAGATAAACCTAGTTCCAAGC
CCATGGAAAAGGAAAATTCATCAGCTGACCCATCTGCAACATACACTTCTATTGACAAGC
TTCTTAGCAATGGCTTTGCCCGTCAGCTACTGGAATCAAATCCAAGAACCAAGTCTATCC
ACATTAAATGTGATCCTTCAAGACCTAATTCTGGATGGCAATGGTTGGAGAGGTGGATGT
CTGTCTCATCATCAAATCTTGGACAACCACAGATACCAGTGTTGGAGAAAGAGGAACTGG
AACATGAGAGAGTTGAGAATTCTGCTGTCCAAGTAGAAACTGGAATTACATCTGAAACAA
CCAGTGAGTCTGAAGATTTGAAGTCTAATGTTAGGGAAACAGCAGTGCCATCTGAAAGTG
AAGAGAATTTAATCACTTATGATGCAGAGAGCTTTGACTTTCAGACATGCTGCCCTACCT
CTTCTTCGGTAAAGGACAATCTTGAGCTACCTCCATCAGAGAATACAGGTGGTACATCAC
ATGCAAAAGACTCCCCATCAGAGATAGATTTGCTCCCAAATCACACGATGCAACCAGAAG
AAAAATCTCTAACAGAGTTCAATTCTGTTTCTGGTAAGTCTGAAATGGAAAGTGAACAAC
CCAAACGTTCTGTTAAAAGGTTTGCCTCTGAACAACTGGAGACTGAAGGGAAGAAGTTTG
TATTTGGATCGAGGAAGGTGAGTAATCCTGCATTTGTTGCTGCCCAGTCAAAATTTGAAG
AGCTGAGTTCTACAGCCAATTCAGGTAGATTAATCAGTCCTTCCCATCAAGATGTTGGAG
TTGAATCAAACATCGAGACAGTTTCATCTGCAGCTGATACCTCAATCACGACAAAGGATC
TTAACAGCGAAGATAATTCAATTCCACCTAATTCAAGGCTTCAAGTTGGTGGCTCTGAAT
GTGGCACTGAACTTTCTATTACTTCTACTCTTGATTCACCTGATATATCCGAAGTTGGAG
CCATGGAATTTGACAATGAAGCCAAAGTCTCAGAAGAAGTGATTTGCAATCTCAACAGCA
CTGGAGGCCTTGATGTTGAATCCAAGGATGTGTCCACCATCGCAGTGTCTAATTTATCTG
ACACTATGTTGGCTCCACCAGAGAAACGTGATGCTGTTAATGGTGAACCTGTTAATTCAG
TTGTAGATGTGGACTCCTCACAGGTAAAGCAGAAGCCAGAGAGAACTGCATCTGATCTGC
AGATAGAACTGGACCCTCAGACAGGCCGTCAAGCATACAGGTCATCACCAGAAGCTTCTC
CAAGGAGCCACATCACTGTTCCCGAGTCCCAAGGAACACCTTCCAGCCAGGTATCAGTGA
AAGCTAAAAGGAGCAAAACTGATAAAAGTGGGTCCAACCAAAAGCGTGCATCTCTGTCAG
CAGGTAAGAGATCCCCTTCAAATCCAAACCATGATTCTGGTGCAAGGAGTAGCATGGAAC
AATTGCCTAAAGATCAGAAAACTGGGAAGAGACGCAATTCTTTTGGTTCAACAAGACCTG
ATAATGTTGATCAGGAACCGAGAGATAGTAGTAGCAGTAATTCTCTGCCCAGTTACATGC
AAGCCACAGAGTCTGCAAGAGCCAAGCTCCATGCAAATAACTCTCCCAGATCAAGTCCAG
ATGTGCAAGACAAGGACATTTACATCAAGAAGAGGCACTCCCTGCCTGGTGCAAATGGAA
GGCAGGGATCTCCTCGCATCCAGAGATCTATGTCTCAAGCTCAGCAGGGTGCAAAGGGAA
ATAGTGCTAATCCTCCCCATGGTATTTTCTGAAGAGAAAGTGGCAGAGGTGAAGAGATAT
CTGGAGCGATGTAACCAACAAAGGCAGTGGTGGTATTTAGTCTGTCCTAAACAGTCATTT
GGAGTTAAAGATTTCTTCTTGGCGGTTAGCTATCTAGTTCTGAATTTTGTCTCTTTTCTT
GTGGATAATGTGGTAGATAATCCATGCATGACATTCGGGGATTGGGAGGGATGAGATACA
TAAAAACTGTGGGAGCATTTCATGTACATTATTAGTACTATTACTGCTATTGTTATTTTC
TGAAAGTGTTCCGGTGGAATGCTTGTATGTTTGTTTAACAGTATTTGTGTGGTGTTTACC
CAGATTTATTACAAGATGTTTCTGGTTGTTTCTCCAAAGTTTGGGACATCAAGGACAGCT
CCTTAAGGTTTTCACCAGTTATTGTAATAAAATGGATTTTTTCTATCTGCTGGCATCAGC
CCCCGTTTCTTTTTAACAGACTCTTATTTTTCCTTTTCTTTTTTCCATGTTTTTTATTTT
TTATTTTTTATTTTTTCATGTGGTTGTGCCTTTTACATTTTGTTTTTCTTCATTTTG