Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13560.t01
CDS Infomation

cds chromosome:12X:18:11577367:11581885:1 gene:VIT_18s0001g13560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAGAAGAAGTTCATCGACAAGAAAAAATCCGCAACATTCCAGTTACTCGCTCGC
GACTCATCCGATCCCAATTACCAAGATTCACCAGGTCATGATCGAGTCTTCATTAGGGTT
GACAACAATCCATATTCAGTCGACGGTATCTTCCACGAAAGCGACGACCTTTCTGGGCCT
AGCCATTACGCCGACGACCCTGATTCTATCTTCGCCGACGCACCCGACGACGACAACGAC
GGCGAAGAAGATGATCGGGTTTTTGGGAAGCAGAGTTCATCGCAGCTGTCAATTGGTGCG
ACGGCGGCGGCGGTGCCGTTGCCGGATCATGTGAGGAGAGAGATTTTGGAGCTAGGGTTT
CCTGATGATGGCTATAACTATTTGACTCATTTAAGGGAGATCAAGAATACTGGAGGCGGT
TCGGCGTTTTATCATAACAGTAAGGCCAGGCTTGATCAGCTTCCCCTTGATGTCAAGGGA
TATGATGCTTCAAGAGTTCATATTGGAGATGTGAAAAGAGACCCGGATGAGAAGGCCCTT
TACAGTGTTGCAGAGAAGACTGTCGGTGTGAGGCTTCAGAAAGCAGTTGATCCTGAAGTG
GCTGCATTGTTAGATTCCAAGGATTCTGTGTTTGGTTCTGATGTAGAGGATTTGGAAGAG
GATTTTGTTATTCAGGCTAATATTCATGAAGAAGGGAAGGATGATTTCATTGGTAAGAAA
TTAACAAAAGAAGATGTCGATGAATCTTACACCCAAGAACCACAAGAAGACCCGGTTGAA
TTTGTTGGTCATGATGAAATAAGAAACCAATTTGTAGGAGCTGGAGATGACATTATTATT
AGCGAGGAGCCAAGAGTTCACCGTCTTTTGGATGAGCAATTTGATCAGCTTGAGCGTATG
GAATATGGCACAGAAAGTGATGATGATTATGGTGGTTCTGTAGCTGAGGATTATGAATCT
CTTGCAGACAAGCTAAATCATGCTCTTAAGGACCATGCGACAGATGACTTGGAACTTAAT
GAAAAATATAGGGTTCCTGCAGATTTATTGCATGACAAAGAGGGACTAAAAGATTCAGGG
TCATTGGACTCATCTGCTGATGTGATTCGTCGTTGTGTGGAATATGCTGAAAAGTATGAA
AATGAAGACCCAAATGAAGATGTTGTTGTTCTAGAGGAAAGTAGTGATGAATCCGGAGGG
TGGGATTGTGAAACTATTGTTTCTACATATTCAAATCTTGATAATCACCCAGGAAAAATT
GAAGCCCCAGAAATAACTAGAAAGAAAAAGTTGGTTGAAACTGTCTCTGGACCCTTAAGT
GCCACCAATCATGTAATACCCCTTCGAGGGAAAGAGAAGCTCCCTGTTGACTTTTTGCCT
CGTGGTAAAAAACCTTCTACAGAGAAGGCTAAGGATGTGAGTAGCCTGAGAGCTGAGCAG
CAGAAGAGGAAGAAACATGGTCAGGAGGAAAAGAAAGAAAAGAAAGAACGAAAGACTGCT
GTAAAAGAGGAACGGCGAGAGGCACGGCGTGTGAAAAAGGAAACAAAGGAGATGTACAAG
TCTGAAACCCAGCGTGCTCAAAGAGTTGCTGCTATTTCTGGCCCATCTTCAATTCATCTT
TCGTAA

Peptide Sequence

PEP ID

VIT_18s0001g13560.t01
PEP Infomation

pep chromosome:12X:18:11577367:11581885:1 gene:VIT_18s0001g13560 transcript:VIT_18s0001g13560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKKKFIDKKKSATFQLLARDSSDPNYQDSPGHDRVFIRVDNNPYSVDGIFHESDDLSGP
SHYADDPDSIFADAPDDDNDGEEDDRVFGKQSSSQLSIGATAAAVPLPDHVRREILELGF
PDDGYNYLTHLREIKNTGGGSAFYHNSKARLDQLPLDVKGYDASRVHIGDVKRDPDEKAL
YSVAEKTVGVRLQKAVDPEVAALLDSKDSVFGSDVEDLEEDFVIQANIHEEGKDDFIGKK
LTKEDVDESYTQEPQEDPVEFVGHDEIRNQFVGAGDDIIISEEPRVHRLLDEQFDQLERM
EYGTESDDDYGGSVAEDYESLADKLNHALKDHATDDLELNEKYRVPADLLHDKEGLKDSG
SLDSSADVIRRCVEYAEKYENEDPNEDVVVLEESSDESGGWDCETIVSTYSNLDNHPGKI
EAPEITRKKKLVETVSGPLSATNHVIPLRGKEKLPVDFLPRGKKPSTEKAKDVSSLRAEQ
QKRKKHGQEEKKEKKERKTAVKEERREARRVKKETKEMYKSETQRAQRVAAISGPSSIHL
S

Transcript Sequence

Transcript ID

VIT_18s0001g13560.t01
Transcript Infomation

cdna chromosome:12X:18:11577367:11581885:1 gene:VIT_18s0001g13560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGGGTTTATCCAGTGTTTCGATTTTGAAGTCCGGTGACTGTCTTGGGTTTCTGCTTTGA
AGTTCCTCCATTCTCTGGTATATTTGGTCTCCAATTTCAATCAAATGGGGAAGAAGAAGT
TCATCGACAAGAAAAAATCCGCAACATTCCAGTTACTCGCTCGCGACTCATCCGATCCCA
ATTACCAAGATTCACCAGGTCATGATCGAGTCTTCATTAGGGTTGACAACAATCCATATT
CAGTCGACGGTATCTTCCACGAAAGCGACGACCTTTCTGGGCCTAGCCATTACGCCGACG
ACCCTGATTCTATCTTCGCCGACGCACCCGACGACGACAACGACGGCGAAGAAGATGATC
GGGTTTTTGGGAAGCAGAGTTCATCGCAGCTGTCAATTGGTGCGACGGCGGCGGCGGTGC
CGTTGCCGGATCATGTGAGGAGAGAGATTTTGGAGCTAGGGTTTCCTGATGATGGCTATA
ACTATTTGACTCATTTAAGGGAGATCAAGAATACTGGAGGCGGTTCGGCGTTTTATCATA
ACAGTAAGGCCAGGCTTGATCAGCTTCCCCTTGATGTCAAGGGATATGATGCTTCAAGAG
TTCATATTGGAGATGTGAAAAGAGACCCGGATGAGAAGGCCCTTTACAGTGTTGCAGAGA
AGACTGTCGGTGTGAGGCTTCAGAAAGCAGTTGATCCTGAAGTGGCTGCATTGTTAGATT
CCAAGGATTCTGTGTTTGGTTCTGATGTAGAGGATTTGGAAGAGGATTTTGTTATTCAGG
CTAATATTCATGAAGAAGGGAAGGATGATTTCATTGGTAAGAAATTAACAAAAGAAGATG
TCGATGAATCTTACACCCAAGAACCACAAGAAGACCCGGTTGAATTTGTTGGTCATGATG
AAATAAGAAACCAATTTGTAGGAGCTGGAGATGACATTATTATTAGCGAGGAGCCAAGAG
TTCACCGTCTTTTGGATGAGCAATTTGATCAGCTTGAGCGTATGGAATATGGCACAGAAA
GTGATGATGATTATGGTGGTTCTGTAGCTGAGGATTATGAATCTCTTGCAGACAAGCTAA
ATCATGCTCTTAAGGACCATGCGACAGATGACTTGGAACTTAATGAAAAATATAGGGTTC
CTGCAGATTTATTGCATGACAAAGAGGGACTAAAAGATTCAGGGTCATTGGACTCATCTG
CTGATGTGATTCGTCGTTGTGTGGAATATGCTGAAAAGTATGAAAATGAAGACCCAAATG
AAGATGTTGTTGTTCTAGAGGAAAGTAGTGATGAATCCGGAGGGTGGGATTGTGAAACTA
TTGTTTCTACATATTCAAATCTTGATAATCACCCAGGAAAAATTGAAGCCCCAGAAATAA
CTAGAAAGAAAAAGTTGGTTGAAACTGTCTCTGGACCCTTAAGTGCCACCAATCATGTAA
TACCCCTTCGAGGGAAAGAGAAGCTCCCTGTTGACTTTTTGCCTCGTGGTAAAAAACCTT
CTACAGAGAAGGCTAAGGATGTGAGTAGCCTGAGAGCTGAGCAGCAGAAGAGGAAGAAAC
ATGGTCAGGAGGAAAAGAAAGAAAAGAAAGAACGAAAGACTGCTGTAAAAGAGGAACGGC
GAGAGGCACGGCGTGTGAAAAAGGAAACAAAGGAGATGTACAAGTCTGAAACCCAGCGTG
CTCAAAGAGTTGCTGCTATTTCTGGCCCATCTTCAATTCATCTTTCGTAAGTAATTTGTC
ATCTGAGTATTCAGACAATTTTGGTCCCCCAACAAAGCATGACTTCAAGCAATGTAACTG
CAGTAATCTCACTCCAATAGTCCACATTAAAGCAACCCGAACATTTGGCTCTTGATGTGT
TGCTCTCCCTTCTGGAGTTGAGCACCTTGGTGTTTTACTTTTGTTTTAGTTTCTAATGTG
GTTGGTTAGTGGTTGATATCTCTGCTGCTATGTGGAATGGGAGATGAAACAGAAGAGTCC
TATGTAATGCAG