Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g13430.t01
CDS Infomation	cds chromosome:12X:18:11496666:11502715:-1 gene:VIT_18s0001g13430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit alpha [Source:UniProtKB/TrEMBL;Acc:F6GZQ1]
Sequence	ATGTTGACGAAATTCGAGACGAAGAGTAATAGAGTTAAGGGACTGAGTTTTCACACTAAG AGGCCATGGATCCTTGCGAGTCTTCACAGCGGTGTGATCCAGCTATGGGATTACAGAATG GGGACTCTTATTGACAGATTTGATGAGCACGATGGACCAGTGCGTGGTGTGCATTTCCAC AAATCTCAGCCGCTGTTTGTTTCTGGAGGAGATGATTACAAGATCAAGGTGTGGAATTAT AAGTTACATAGGTGTTTATTTACCCTTTTTGGACACCTTGATTACATCCGCACAGTTCAG TTTCACCATGAGTATCCTTGGATTGTTAGTGCAAGTGATGACCAGACTATTAGAATATGG AACTGGCAGTCCCGCACTTTAATGTCTGTATTAACCGGACATAATCATTATGTCATGTGT GCCTCATTCCATCCCAAAGAGGACCTGGTTGTATCAGCCTCCTTAGATCAGACCGTTCGT GTTTGGGATATTGGTGCCTTGAGGAAGAAAACAAGTTCCCCTGCAGATGATATCCTGCGC TTGAGTCAAATGAACACAGATTTCTTTGGTGGAGTTGACGCTGTTGTTAAGTATGTTTTG GAGGGTCATGACCGAGGAGTGAATTGGGCTTCATTCCATCCCACTCTTCCTCTTATAGTC TCAGGAGCAGATGATCGCCAAGTGAAACTTTGGAGAATGAACGACACAAAGGCTTGGGAA GTAGATACTTTGAGGGGGCACATGAATAATGTTTCATGTGTCTTCTTTCATGCAAGGCAG GATGTGATTGTGTCAAATTCAGAGGATAAAAGTATTCGTGTTTGGGATGCAACAAAGCGA ACTGGTATTCAGACATTTCGAAGGGAACATGACAGGTTCTGGATTCTTACGGCACATCCT GAAATGAACCTTCTTGCAGCTGGTCATGATAGTGGCATGATTGTCTTTAAGTTGGAGAGA GAACGTCCTGCCTTTTCTGTGAGTGGTGATTGTCTGTACTATGTCAAAGACCGCTTTCTC CGCTTGTACGAATTCTCAACTCAGAAGGACGCTCAGGTGATTCCAATTCGCAGGCCTGGT TCTGCTGCCTTGAATCAAGGCCCAAGAACTCTTTCTTACAGCCCTACAGAAAATGCTGTT TTGATTTGTTCAGATGTGGACGGGGGGTCATATGAACTCTATATTGTGCCCAGAGATAGC ATTGGCAGGGGGGATACGGTTCAGGATGCAAAAAGAGGGGTTGGAGGGTCAGCAGTTTTT GTGGCTCGAAACAGGTTTGCTGTACTAGAAAAGAGCAGCAACCAAGTGTTAGTCAAGAAC CTTAAAAATGAGATCGTGAAGAAGAGTGTTCTTCCTGTTGCTGCTGATGCAATATTTTAT GCTGGAACTGGGAACCTGCTGTGCAGGGCAGAGGATAGAGTCGTTGTCTTTGATCTCCAG CAGAGGCTTGTTCTTGGGGAACTTCAAACATCTTTCATCAGGTATGTTGTTTGGTCAAAC GACATGGAGAATGTTGCTTTGCTGAGCAAACATACTATCATAATAGCCAGTAAGAAACTC GAGCACCGGTGCACACTTCATGAGACAATCCGTGTAAAGAGTGGAGCCTGGGATGATAAC GGGGTCTTCATATATACAACCCTGAATCACATTAAATATTGTCTTCCTAATGGTGATAAT GGTATCATCAGGACCCTCGATGTCCCAGTATACATAACAAAAGTATCTCAAAACACTGTC TATTGCTTGGATCGAGATGGAAAAAACCTTGCTGTTGCAATCGATGCAACTGAATATGTC TTCAAGCTGTCCCTCCTGAAGAAGAGATTTGACCAGGTAATGAGCATGATCAGGAGCTCG GAGCTTTGTGGGCAGGCCATGATTGCTTACCTCCAGCAAAAGGGTTTCCCAGAGGTTGCT CTTCATTTTGTGAAGGATGAAAGGACTCGTTTCAACTTGGCACTAGAAAGTGGCAATATC CAGATCGCCGTTGCTTCTGCAAAGGAAATTGATAAGAAAGATCACTGGTATAGGTTGGGA GTGGAGGCCCTCCGTCAGGGTAATGCAGGCATTGTAGAATATGCATACCAAAGGACAAAG AACTTTGAGAGGTTATCCTTCCTCTATCTTGTAACAGGTAATATAGATAAATTGTCTAAA ATGCTGAAAATTGCTGAAGTAAAGAATGATGTTATGGGCCAATTTCACAATGCCCTATAC TTGGGTGATATTAGGGAGCGCGTCAAGATCTTGGAAAATGCTGGCCATTTGCCCCTTGCT TACATCACTGCTGCTGTCCATGGGCTCCATGACATTGCAGAACGTCTGGCTGCTGATCTT GGAGATAATGTCCCTTCTTTGCCTGAGGGAAAATCACATTCTCTTTTGATTCCTCCAAGT CCTATCATGTGTGGTGGAGATTGGCCCTTGTTGAGGGTCATGAAAGGAATATTTGAGGGC GGTCTTGATAATGTGGGCAGGAATGCTCAGGAAGAGGATGAAGAAGCTGCAGATGCTGAT TGGGGTGAGGATTTGGATATTGTTGATGGGGAAAACATGCAGAATGGAGACATTGGTATG GTGCTGGAGGATGGGGAAGTGCATGAAGAAAATGAAGAGGGAGGATGGGATCTTGAGGAT CTTGAACTTCCTCCTGAGCTTGATACTCCAAAGACTAGCAGCCATGCTCGCTCATCAGTT TTTATTGCCCCAACTCCTGGTATGCCTGTAAATCTAATTTGGACCCAAAGATCATCTCTT GCTGCAGAGCATGCTGCAGCTGGCAATTTTGATACTGCAATGCGTTTGCTGAGCCGGCAG CTTGGTATAAGGAATTTTGCTCCCTTGAAACCACTATTTTTTGATCTACACATGGGTAGC CACACTTACTTGCGTGCCCTTTCTTCATCTCCGGTGATCTCAGTAGCAGTTGAGAGGGGA TGGAGCGAATCCTCCAGCCCTAATGTGAGGGGTCCACCTGCACTTGTGTTCAAATTCTCA CAGTTGGAAGAAAAGCTAAAGGCTGGTTACAGGGCAACAACTGCTGGGAAATTTACAGAA GCTCTACGGATTTTTCTCAGTATTCTCCATACCATTCCTCTGATTGTGGTTGAGTCAAGG AGGGAAGTAGATGAGGTCAAGGAATTGATCATCATTGTGAAAGAGTATGCTCTGGGTTTG CAGATGGAAGTTAAAAGGAGGGAAGTCAAGGATGATCCAGTTCGTCAGCAGGAACTGGCT GCTTACTTTACTCACTGTAACCTGCAATTGCCTCACCTGAGACTGGCATTGTTAAATGCC ATGACTGTTTGCTATAAGGCACGCAATCTTAACACAGCAGCAAACTTTGCCCGGCGACTG TTGGAGACTAATCCCACCAATGAAAACCATGCCAAAACAGCCCGGCAAGTCCTGCAGGCT GCCGAGAGGAACATGACAGATGCATCCCCGCTGAATTATGACTTCAGAAACCCATTTGTT GTTTGTGGGGCAACCTACATCCCCATATACCGCGGACAGAAGGATGTGTCGTGCCCTTTC TGCAGTTCGCGATTTGTTCCTTCACAGGAAGGGCAGCTTTGTACTGTTTGTGATCTTGCG GTTATTGGATCTGATGCATCTGGATTGCTCTGTTCTCCTTCCCAGATAAGGTGA

Peptide Sequence

PEP ID	VIT_18s0001g13430.t01
PEP Infomation	pep chromosome:12X:18:11496666:11502715:-1 gene:VIT_18s0001g13430 transcript:VIT_18s0001g13430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit alpha [Source:UniProtKB/TrEMBL;Acc:F6GZQ1]
Sequence	MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KSQPLFVSGGDDYKIKVWNYKLHRCLFTLFGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTLMSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTSSPADDILR LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHMNNVSCVFFHARQDVIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILTAHP EMNLLAAGHDSGMIVFKLERERPAFSVSGDCLYYVKDRFLRLYEFSTQKDAQVIPIRRPG SAALNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPRDSIGRGDTVQDAKRGVGGSAVF VARNRFAVLEKSSNQVLVKNLKNEIVKKSVLPVAADAIFYAGTGNLLCRAEDRVVVFDLQ QRLVLGELQTSFIRYVVWSNDMENVALLSKHTIIIASKKLEHRCTLHETIRVKSGAWDDN GVFIYTTLNHIKYCLPNGDNGIIRTLDVPVYITKVSQNTVYCLDRDGKNLAVAIDATEYV FKLSLLKKRFDQVMSMIRSSELCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI QIAVASAKEIDKKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNIDKLSK MLKIAEVKNDVMGQFHNALYLGDIRERVKILENAGHLPLAYITAAVHGLHDIAERLAADL GDNVPSLPEGKSHSLLIPPSPIMCGGDWPLLRVMKGIFEGGLDNVGRNAQEEDEEAADAD WGEDLDIVDGENMQNGDIGMVLEDGEVHEENEEGGWDLEDLELPPELDTPKTSSHARSSV FIAPTPGMPVNLIWTQRSSLAAEHAAAGNFDTAMRLLSRQLGIRNFAPLKPLFFDLHMGS HTYLRALSSSPVISVAVERGWSESSSPNVRGPPALVFKFSQLEEKLKAGYRATTAGKFTE ALRIFLSILHTIPLIVVESRREVDEVKELIIIVKEYALGLQMEVKRREVKDDPVRQQELA AYFTHCNLQLPHLRLALLNAMTVCYKARNLNTAANFARRLLETNPTNENHAKTARQVLQA AERNMTDASPLNYDFRNPFVVCGATYIPIYRGQKDVSCPFCSSRFVPSQEGQLCTVCDLA VIGSDASGLLCSPSQIR

Transcript Sequence

Transcript ID	VIT_18s0001g13430.t01
Transcript Infomation	cdna chromosome:12X:18:11496666:11502715:-1 gene:VIT_18s0001g13430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit alpha [Source:UniProtKB/TrEMBL;Acc:F6GZQ1]
Sequence	CAAGACGATCCTCATTCTCTATTTTTCCTTTCTTTGTAGAATCTCCCTGATCTGTGGTCT AGCCTTAAGCTGCACCCCTCCCTGCTTATCCTACGCTCCCCTGACCGACGATTTCCCATT TGTCTCTCGTTGTCGGCGGTTGACGCGGCGATGTTCGGTTCCTCTTGATCCACCGTCATC CTTTTCAGATCTGAGAGTTTGAGTTTTGATTTGAAACGATGTTGACGAAATTCGAGACGA AGAGTAATAGAGTTAAGGGACTGAGTTTTCACACTAAGAGGCCATGGATCCTTGCGAGTC TTCACAGCGGTGTGATCCAGCTATGGGATTACAGAATGGGGACTCTTATTGACAGATTTG ATGAGCACGATGGACCAGTGCGTGGTGTGCATTTCCACAAATCTCAGCCGCTGTTTGTTT CTGGAGGAGATGATTACAAGATCAAGGTGTGGAATTATAAGTTACATAGGTGTTTATTTA CCCTTTTTGGACACCTTGATTACATCCGCACAGTTCAGTTTCACCATGAGTATCCTTGGA TTGTTAGTGCAAGTGATGACCAGACTATTAGAATATGGAACTGGCAGTCCCGCACTTTAA TGTCTGTATTAACCGGACATAATCATTATGTCATGTGTGCCTCATTCCATCCCAAAGAGG ACCTGGTTGTATCAGCCTCCTTAGATCAGACCGTTCGTGTTTGGGATATTGGTGCCTTGA GGAAGAAAACAAGTTCCCCTGCAGATGATATCCTGCGCTTGAGTCAAATGAACACAGATT TCTTTGGTGGAGTTGACGCTGTTGTTAAGTATGTTTTGGAGGGTCATGACCGAGGAGTGA ATTGGGCTTCATTCCATCCCACTCTTCCTCTTATAGTCTCAGGAGCAGATGATCGCCAAG TGAAACTTTGGAGAATGAACGACACAAAGGCTTGGGAAGTAGATACTTTGAGGGGGCACA TGAATAATGTTTCATGTGTCTTCTTTCATGCAAGGCAGGATGTGATTGTGTCAAATTCAG AGGATAAAAGTATTCGTGTTTGGGATGCAACAAAGCGAACTGGTATTCAGACATTTCGAA GGGAACATGACAGGTTCTGGATTCTTACGGCACATCCTGAAATGAACCTTCTTGCAGCTG GTCATGATAGTGGCATGATTGTCTTTAAGTTGGAGAGAGAACGTCCTGCCTTTTCTGTGA GTGGTGATTGTCTGTACTATGTCAAAGACCGCTTTCTCCGCTTGTACGAATTCTCAACTC AGAAGGACGCTCAGGTGATTCCAATTCGCAGGCCTGGTTCTGCTGCCTTGAATCAAGGCC CAAGAACTCTTTCTTACAGCCCTACAGAAAATGCTGTTTTGATTTGTTCAGATGTGGACG GGGGGTCATATGAACTCTATATTGTGCCCAGAGATAGCATTGGCAGGGGGGATACGGTTC AGGATGCAAAAAGAGGGGTTGGAGGGTCAGCAGTTTTTGTGGCTCGAAACAGGTTTGCTG TACTAGAAAAGAGCAGCAACCAAGTGTTAGTCAAGAACCTTAAAAATGAGATCGTGAAGA AGAGTGTTCTTCCTGTTGCTGCTGATGCAATATTTTATGCTGGAACTGGGAACCTGCTGT GCAGGGCAGAGGATAGAGTCGTTGTCTTTGATCTCCAGCAGAGGCTTGTTCTTGGGGAAC TTCAAACATCTTTCATCAGGTATGTTGTTTGGTCAAACGACATGGAGAATGTTGCTTTGC TGAGCAAACATACTATCATAATAGCCAGTAAGAAACTCGAGCACCGGTGCACACTTCATG AGACAATCCGTGTAAAGAGTGGAGCCTGGGATGATAACGGGGTCTTCATATATACAACCC TGAATCACATTAAATATTGTCTTCCTAATGGTGATAATGGTATCATCAGGACCCTCGATG TCCCAGTATACATAACAAAAGTATCTCAAAACACTGTCTATTGCTTGGATCGAGATGGAA AAAACCTTGCTGTTGCAATCGATGCAACTGAATATGTCTTCAAGCTGTCCCTCCTGAAGA AGAGATTTGACCAGGTAATGAGCATGATCAGGAGCTCGGAGCTTTGTGGGCAGGCCATGA TTGCTTACCTCCAGCAAAAGGGTTTCCCAGAGGTTGCTCTTCATTTTGTGAAGGATGAAA GGACTCGTTTCAACTTGGCACTAGAAAGTGGCAATATCCAGATCGCCGTTGCTTCTGCAA AGGAAATTGATAAGAAAGATCACTGGTATAGGTTGGGAGTGGAGGCCCTCCGTCAGGGTA ATGCAGGCATTGTAGAATATGCATACCAAAGGACAAAGAACTTTGAGAGGTTATCCTTCC TCTATCTTGTAACAGGTAATATAGATAAATTGTCTAAAATGCTGAAAATTGCTGAAGTAA AGAATGATGTTATGGGCCAATTTCACAATGCCCTATACTTGGGTGATATTAGGGAGCGCG TCAAGATCTTGGAAAATGCTGGCCATTTGCCCCTTGCTTACATCACTGCTGCTGTCCATG GGCTCCATGACATTGCAGAACGTCTGGCTGCTGATCTTGGAGATAATGTCCCTTCTTTGC CTGAGGGAAAATCACATTCTCTTTTGATTCCTCCAAGTCCTATCATGTGTGGTGGAGATT GGCCCTTGTTGAGGGTCATGAAAGGAATATTTGAGGGCGGTCTTGATAATGTGGGCAGGA ATGCTCAGGAAGAGGATGAAGAAGCTGCAGATGCTGATTGGGGTGAGGATTTGGATATTG TTGATGGGGAAAACATGCAGAATGGAGACATTGGTATGGTGCTGGAGGATGGGGAAGTGC ATGAAGAAAATGAAGAGGGAGGATGGGATCTTGAGGATCTTGAACTTCCTCCTGAGCTTG ATACTCCAAAGACTAGCAGCCATGCTCGCTCATCAGTTTTTATTGCCCCAACTCCTGGTA TGCCTGTAAATCTAATTTGGACCCAAAGATCATCTCTTGCTGCAGAGCATGCTGCAGCTG GCAATTTTGATACTGCAATGCGTTTGCTGAGCCGGCAGCTTGGTATAAGGAATTTTGCTC CCTTGAAACCACTATTTTTTGATCTACACATGGGTAGCCACACTTACTTGCGTGCCCTTT CTTCATCTCCGGTGATCTCAGTAGCAGTTGAGAGGGGATGGAGCGAATCCTCCAGCCCTA ATGTGAGGGGTCCACCTGCACTTGTGTTCAAATTCTCACAGTTGGAAGAAAAGCTAAAGG CTGGTTACAGGGCAACAACTGCTGGGAAATTTACAGAAGCTCTACGGATTTTTCTCAGTA TTCTCCATACCATTCCTCTGATTGTGGTTGAGTCAAGGAGGGAAGTAGATGAGGTCAAGG AATTGATCATCATTGTGAAAGAGTATGCTCTGGGTTTGCAGATGGAAGTTAAAAGGAGGG AAGTCAAGGATGATCCAGTTCGTCAGCAGGAACTGGCTGCTTACTTTACTCACTGTAACC TGCAATTGCCTCACCTGAGACTGGCATTGTTAAATGCCATGACTGTTTGCTATAAGGCAC GCAATCTTAACACAGCAGCAAACTTTGCCCGGCGACTGTTGGAGACTAATCCCACCAATG AAAACCATGCCAAAACAGCCCGGCAAGTCCTGCAGGCTGCCGAGAGGAACATGACAGATG CATCCCCGCTGAATTATGACTTCAGAAACCCATTTGTTGTTTGTGGGGCAACCTACATCC CCATATACCGCGGACAGAAGGATGTGTCGTGCCCTTTCTGCAGTTCGCGATTTGTTCCTT CACAGGAAGGGCAGCTTTGTACTGTTTGTGATCTTGCGGTTATTGGATCTGATGCATCTG GATTGCTCTGTTCTCCTTCCCAGATAAGGTGATTTGAGCTCAATCAGGAGCAATTTTCAA ATTTCAGCAGTAGCACTGATTATGCTAGCTGTTTCTTCTCGACAGGTAAAGGTAGGAACT TTAAACAAAGAGTTGGGTTCCATTAGATTGTA