Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13380.t01
CDS Infomation

cds chromosome:12X:18:11409762:11411534:1 gene:VIT_18s0001g13380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTGTCTCCTTCGCTCCGTTCTCCTGCTTTTTGTGCCTTTTCTTTTGTTCTTTGGG
GCCATGTCTGATGTATCTTCTAATGAATTGGATGATCTTCTGATTCGCCAAGTCGTGTCG
AACAGTGATGATCTCTTGAGCGCCGAACACCATTTCGCCGCATTCAAGGCCAGGTTCCGG
AAAACGTACGCCACGGCGGAGGAGCACGACTACCGGTTTAGCATCTTCAAGGCTAATTTA
CGGCGTGCTAAACGAAACCAGTTGCTTGATCCTTCCGCCGTGCACGGTGTCACTCGATTT
TCTGATTTAACTCCGGCGGAGTTTCGGCAAAACTATCTCGGATTAAAGCCTCTTCGGTTC
CCAATCGATACACAACAGGCTCCAATACTTCCGACGAATGATCTCCCTACAGATTTCGAT
TGGAGAGATCATGGCGCGGTAACAGCTGTTAAAGATCAAGGTGAATGCGGATCATGCTGG
TCATTCAGCACAACTGGAGCCTTGGAAGGAGCTCATTTTCTCGCCACTGGAAATCTTGTT
AGCCTGAGCGAACAGCAACTTGTGGATTGTGACCACGAGTGTGATCCAGAAGAATATGGT
GCTTGTGACAGGGGCTGCAATGGTGGGTTGATGAACACTGCCTTTGAATACATACTGAAG
GCTGGGGGAGTTGTGCGAGGGGAGGATTATCCTTACACTGGGACTGATGGTCATTGCAAG
TTTGACAAAACAAAAATTGCTGCATCTGTATCTAACTTCAGTACTGTTTCTATTGATGAA
GATCAAATTGCTGCGAATTTGGTGAAGAATGGCCCTCTTGCAGTGGGCATCAATGCGATT
TTCATGCAATCATACGCGGGTGGAGTTTCATGCCCATTCATTTGCTCAACCAGTTTGAAT
CATGGGGTACTTCTAGTTGGATATGGGTCTGCTGGTTATTCCCCCATCCGATTCAAGGAA
AAGCCTTATTGGCTCTTGAAGAACTCCTGGGGTCAAAATTGGGGAGAGCATGGGTATTAC
AAGATTTGCAGGGGTCATAATATATGTGGAGTGGATTCCATGGTCTCAACGGTTGCAGCT
ATCCAATCCGCTACTTAG

Peptide Sequence

PEP ID

VIT_18s0001g13380.t01
PEP Infomation

pep chromosome:12X:18:11409762:11411534:1 gene:VIT_18s0001g13380 transcript:VIT_18s0001g13380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDCLLRSVLLLFVPFLLFFGAMSDVSSNELDDLLIRQVVSNSDDLLSAEHHFAAFKARFR
KTYATAEEHDYRFSIFKANLRRAKRNQLLDPSAVHGVTRFSDLTPAEFRQNYLGLKPLRF
PIDTQQAPILPTNDLPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLV
SLSEQQLVDCDHECDPEEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTDGHCK
FDKTKIAASVSNFSTVSIDEDQIAANLVKNGPLAVGINAIFMQSYAGGVSCPFICSTSLN
HGVLLVGYGSAGYSPIRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSMVSTVAA
IQSAT

Transcript Sequence

Transcript ID

VIT_18s0001g13380.t01
Transcript Infomation

cdna chromosome:12X:18:11409762:11411534:1 gene:VIT_18s0001g13380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTACTAGTAAGCAGTCATGGATTGTCTCCTTCGCTCCGTTCTCCTGCTTTTTGTGCCTTT
TCTTTTGTTCTTTGGGGCCATGTCTGATGTATCTTCTAATGAATTGGATGATCTTCTGAT
TCGCCAAGTCGTGTCGAACAGTGATGATCTCTTGAGCGCCGAACACCATTTCGCCGCATT
CAAGGCCAGGTTCCGGAAAACGTACGCCACGGCGGAGGAGCACGACTACCGGTTTAGCAT
CTTCAAGGCTAATTTACGGCGTGCTAAACGAAACCAGTTGCTTGATCCTTCCGCCGTGCA
CGGTGTCACTCGATTTTCTGATTTAACTCCGGCGGAGTTTCGGCAAAACTATCTCGGATT
AAAGCCTCTTCGGTTCCCAATCGATACACAACAGGCTCCAATACTTCCGACGAATGATCT
CCCTACAGATTTCGATTGGAGAGATCATGGCGCGGTAACAGCTGTTAAAGATCAAGGTGA
ATGCGGATCATGCTGGTCATTCAGCACAACTGGAGCCTTGGAAGGAGCTCATTTTCTCGC
CACTGGAAATCTTGTTAGCCTGAGCGAACAGCAACTTGTGGATTGTGACCACGAGTGTGA
TCCAGAAGAATATGGTGCTTGTGACAGGGGCTGCAATGGTGGGTTGATGAACACTGCCTT
TGAATACATACTGAAGGCTGGGGGAGTTGTGCGAGGGGAGGATTATCCTTACACTGGGAC
TGATGGTCATTGCAAGTTTGACAAAACAAAAATTGCTGCATCTGTATCTAACTTCAGTAC
TGTTTCTATTGATGAAGATCAAATTGCTGCGAATTTGGTGAAGAATGGCCCTCTTGCAGT
GGGCATCAATGCGATTTTCATGCAATCATACGCGGGTGGAGTTTCATGCCCATTCATTTG
CTCAACCAGTTTGAATCATGGGGTACTTCTAGTTGGATATGGGTCTGCTGGTTATTCCCC
CATCCGATTCAAGGAAAAGCCTTATTGGCTCTTGAAGAACTCCTGGGGTCAAAATTGGGG
AGAGCATGGGTATTACAAGATTTGCAGGGGTCATAATATATGTGGAGTGGATTCCATGGT
CTCAACGGTTGCAGCTATCCAATCCGCTACTTAGTAGATTA