Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13200.t01
CDS Infomation

cds chromosome:12X:18:11256653:11261569:-1 gene:VIT_18s0001g13200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCCGAAGCTTCTGCTGACGTTTGTTATATACCGTTTAATCTCCACCGTCGGGTTG
ACCTTAGACCCCACCGACCTCCTTCGACTAGAAGTCGACGGTCACTTGAGCGTCGACCCC
TCCGACGTGAAAACGGCTTCCGTGGACTTCGGAATGATGAACCGAGCGGAGCCATTGGCG
GTTCTTCACCCGAGTTCAGCGGAGGATGTAGCTCGACTCGTCGGAGCGGCTTACGGGTCG
GCTCATGGGTTGAGTGTGTCGGCGAGAGGGCATGGGCATTCCATTAATGGGCAGGCGCAG
ACGAGTAGCGGAGTGGTGATTGAGATGAGTGCGTCAAAGGGTGTGAGGCAGTGGGGTTTG
CCTCGTGTTTCAGAGCAGTCGAGGTATGTGGACGCGTGGGGTGGAGAGCTGTGGATAGAT
GTGCTGAAGACCACACTAGAGCACGGGCTTGCACCAAAATCATGGACTGATTACTTGTAT
CTCTCCGTGGGTGGAACCCTTTCGAATGCTGGGATTAGCGGACAAGCTTTCAATCATGGA
CCGCAGATTAGCAATGTCTATGAACTCGATGTTGTCACAGGCAAAGGCGAGCTCTTGACA
TGCTCAGAAGAACAAAACTCAGAACTGTTCCATGCTGTTCTAGGTGGTCTGGGGCAATTT
GGGATTATCACCAGAGCAAGAATAGGTCTGGAACCAGCTCCTCAGAGGGTGAGGTGGATC
CGAGTACTGTACTCCAATTTTTCGACATTTACCAAGGACCAAGAGTATCTCATATCCCTG
CATGGACAGCCACCTAACCAGAAATTCGACTATGTTGAGGGCTTTGTTATAGTTGATGAA
GGCCTTATCAACAACTGGAGGTCCTCCTTTTTCTCCCCTCGCAACCCTGTTAAAATCTCC
TCTTTTGGAACTAACGGGGGTGTGCTCTACTGCTTAGAGGTCACCAAGAACTACCATGAA
TCCACTGCCGATACTATTGACCAGGATGTAGAGGCTCTGCTGAAGAGACTAGATTTTATT
CCGTCATCGGTCTTCACAACGGATCTTCCATATGTGGATTTCCTGGACCGGGTTCACAAG
GCGGAGCTGAAGCTCCGGTCGAAGGGTTTGTGGGACGTGCCGCACCCTTGGCTCAACCTT
TTTGTCCCCAGATCAAGGATTGCTGACTTCGATGAAGGCGTATTCAAGGGCATTTTGGGG
AATAAGACAAGTGGCCCCATCCTCATCTACCCTATGAACAAAAACAAGTGGGACGACCGC
ACATCGGTGGTTACGCCAGAGGAGGACGTGTTTTACCTTGTGGCGCTGCTGCGGTCAGCT
TTGGATTCCGGAGACGAGGCCCAGAGTTTGGAGTATCTCAGCAATCAGAACCGTCAGATC
CTCAGATTCTGTGACGATGCTGGGATCAAGGTGAAGCAGTATCTGCCTCACTACACCACG
CAAGAGGACTGGGTGGACCACTTTGGTGATGACAAGTGGACTTTGTTTTCCAAGAGAAAG
ATGGACTTCGACCCCCGGCGTATTCTAGCCACCGGCCAGCGCATTTTTAAACCCATGGCG
GCTTCTTCTTGGTGA

Peptide Sequence

PEP ID

VIT_18s0001g13200.t01
PEP Infomation

pep chromosome:12X:18:11256653:11261569:-1 gene:VIT_18s0001g13200 transcript:VIT_18s0001g13200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPKLLLTFVIYRLISTVGLTLDPTDLLRLEVDGHLSVDPSDVKTASVDFGMMNRAEPLA
VLHPSSAEDVARLVGAAYGSAHGLSVSARGHGHSINGQAQTSSGVVIEMSASKGVRQWGL
PRVSEQSRYVDAWGGELWIDVLKTTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFNHG
PQISNVYELDVVTGKGELLTCSEEQNSELFHAVLGGLGQFGIITRARIGLEPAPQRVRWI
RVLYSNFSTFTKDQEYLISLHGQPPNQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKIS
SFGTNGGVLYCLEVTKNYHESTADTIDQDVEALLKRLDFIPSSVFTTDLPYVDFLDRVHK
AELKLRSKGLWDVPHPWLNLFVPRSRIADFDEGVFKGILGNKTSGPILIYPMNKNKWDDR
TSVVTPEEDVFYLVALLRSALDSGDEAQSLEYLSNQNRQILRFCDDAGIKVKQYLPHYTT
QEDWVDHFGDDKWTLFSKRKMDFDPRRILATGQRIFKPMAASSW

Transcript Sequence

Transcript ID

VIT_18s0001g13200.t01
Transcript Infomation

cdna chromosome:12X:18:11256653:11261569:-1 gene:VIT_18s0001g13200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACACAAAGAAAAAGAAGAGGAGAGAGTCAGTGGTATGGTGTATTCTCTGTATTCCCCGT
GTGTTTTGTGTGTGTGTGCGCATATACATAAATAGAAGAGATAGAAAGTCATCTCCTGTT
CTCCTTCTCTCCTTTGCTCCCTCTCCTCCATTCCTCTTGCTCTCCATTTTTATCTGATAA
TGTGAAAAAAGCAGAGGGAGAGAAGAAGCGAATCTGTGCATGTTGCGTGGAAAATCTTTA
AAGCGGAATCCGGCTTACGTTTGCTCCACGACTCCCCACGACGCTGCCACAAGATTTTGT
TCCCTTCCCACCACCACCCGCACCCAAATTCCGTCCGCCCGGTGTGCGCAGTTTTCGTAT
CCTTCACCTTCCATTTCCCTATAAATTTCTCTCCAACAGCTACACTTCACACAGCCTAAT
CCTTAATAAAAAAGAAAAAAATACACAAACCAAAGAAGCAGAGGAGAAAGGAAACACATG
GCGCCGAAGCTTCTGCTGACGTTTGTTATATACCGTTTAATCTCCACCGTCGGGTTGACC
TTAGACCCCACCGACCTCCTTCGACTAGAAGTCGACGGTCACTTGAGCGTCGACCCCTCC
GACGTGAAAACGGCTTCCGTGGACTTCGGAATGATGAACCGAGCGGAGCCATTGGCGGTT
CTTCACCCGAGTTCAGCGGAGGATGTAGCTCGACTCGTCGGAGCGGCTTACGGGTCGGCT
CATGGGTTGAGTGTGTCGGCGAGAGGGCATGGGCATTCCATTAATGGGCAGGCGCAGACG
AGTAGCGGAGTGGTGATTGAGATGAGTGCGTCAAAGGGTGTGAGGCAGTGGGGTTTGCCT
CGTGTTTCAGAGCAGTCGAGGTATGTGGACGCGTGGGGTGGAGAGCTGTGGATAGATGTG
CTGAAGACCACACTAGAGCACGGGCTTGCACCAAAATCATGGACTGATTACTTGTATCTC
TCCGTGGGTGGAACCCTTTCGAATGCTGGGATTAGCGGACAAGCTTTCAATCATGGACCG
CAGATTAGCAATGTCTATGAACTCGATGTTGTCACAGGCAAAGGCGAGCTCTTGACATGC
TCAGAAGAACAAAACTCAGAACTGTTCCATGCTGTTCTAGGTGGTCTGGGGCAATTTGGG
ATTATCACCAGAGCAAGAATAGGTCTGGAACCAGCTCCTCAGAGGGTGAGGTGGATCCGA
GTACTGTACTCCAATTTTTCGACATTTACCAAGGACCAAGAGTATCTCATATCCCTGCAT
GGACAGCCACCTAACCAGAAATTCGACTATGTTGAGGGCTTTGTTATAGTTGATGAAGGC
CTTATCAACAACTGGAGGTCCTCCTTTTTCTCCCCTCGCAACCCTGTTAAAATCTCCTCT
TTTGGAACTAACGGGGGTGTGCTCTACTGCTTAGAGGTCACCAAGAACTACCATGAATCC
ACTGCCGATACTATTGACCAGGATGTAGAGGCTCTGCTGAAGAGACTAGATTTTATTCCG
TCATCGGTCTTCACAACGGATCTTCCATATGTGGATTTCCTGGACCGGGTTCACAAGGCG
GAGCTGAAGCTCCGGTCGAAGGGTTTGTGGGACGTGCCGCACCCTTGGCTCAACCTTTTT
GTCCCCAGATCAAGGATTGCTGACTTCGATGAAGGCGTATTCAAGGGCATTTTGGGGAAT
AAGACAAGTGGCCCCATCCTCATCTACCCTATGAACAAAAACAAGTGGGACGACCGCACA
TCGGTGGTTACGCCAGAGGAGGACGTGTTTTACCTTGTGGCGCTGCTGCGGTCAGCTTTG
GATTCCGGAGACGAGGCCCAGAGTTTGGAGTATCTCAGCAATCAGAACCGTCAGATCCTC
AGATTCTGTGACGATGCTGGGATCAAGGTGAAGCAGTATCTGCCTCACTACACCACGCAA
GAGGACTGGGTGGACCACTTTGGTGATGACAAGTGGACTTTGTTTTCCAAGAGAAAGATG
GACTTCGACCCCCGGCGTATTCTAGCCACCGGCCAGCGCATTTTTAAACCCATGGCGGCT
TCTTCTTGGTGAATCAATCACCCTCGCCCCATCCTTATACTACTCCTGACTTTTGAAATG
TTTTTAATTTTGTACATAAACCTAAAAAGAAATGCAATTAGTGTGAATTAAAATAGAAAT
ATTTTGGGGTTTCC