Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13120.t01
CDS Infomation

cds chromosome:12X:18:11188323:11195903:-1 gene:VIT_18s0001g13120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATTGCGGTTTCCAGAAGAGAGGAGAGGAGCAATGAAGGCCACCGTGAGTTCTTGC
TTTTCTTCTATTTCCATCATCCCTCCCTCGTCTCTAGTCCACGACCCTCACTCTCCATTC
CCTCCAGTCCGTCTTCGTTCAATTCCTGCTTTTACTCTCAGAACGCACACCACTACTTCT
TTCAGACTCGTCAGAGTTCTCCAACGAGGAGTTGGACTCGTGTCTCCCGACGACCTGTCT
CTACCGGAGCCCGTGATTGATGTGAAAGAGGAAGAGGTGTTTGCAGTGGTTGATGGAGTC
GCAGGAACCAAAGCGGAAGAGAAAACCCTAAAGGCCCCCACTAGAGTTAAGAAGAAGGGA
GGTGAAGGAGAGAGTGATGATAATAGGTTCAAGCTGCGTAACGGAAGAGAGGTTTTTGAG
GAAAAAGCATACCTTGTTGCTGTTGAGCTCAAAGGTGACATGGAGTATTCCTTTGGCATA
GAAGAATCACTTAAGGAACTGGCCCAGTTAGCTGACACTGCTGGACTTATGGTTGTTGGT
TCTACATCTCAAAAACTTAGTACTCCAAATCGAAGGACATATATTGGATCTGGCAAGGTT
GCAGAAATTAAGAGTGCAATCCATGCACTGGATGTTGAGACCGTAATATTTGATGATGAG
CTTTCAGCAGGGCAATTGCGTAATTTGGAAAAGGCTTTTGGTGGAGATGTTAGAGTCTGT
GACCGCACTGCCCTCATCCTTGATATCTTTAACCAGCGAGCAGCAACACATGAAGCAGCT
TTACAGGCAAATGTTGCATTGGCACAAATGGAATATCAGTTGCCACGTCTCACGAAGATG
TGGACTCACCTTGAGCGTCAAGCAGGAGGCAAGGTGAAAGGAATGGGTGAGAAACAAATT
GAAGTGGATAAGCGTATCTTACGCACTCAAATTGGTGCTCTTAAAAAAGAGCTAGAATCA
GTTCGGCAACATCGGAAGCAGTATAGAAACCGGCGTTTCTCTGTGCCCGTTCCTGTTGTA
TCTTTGGTTGGGTACACAAATGCTGGAAAGAGTACACTCCTAAATAGATTAACTGGGTCT
AATGTTCTTGCTGAGGATCGGTTATTTGCAACACTTGATCCAACTACAAGAAGGGTGCAG
ATGAAGAATGGTAGGGAATTTCTTCTCACAGATACAGTTGGATTCATCCAAAAGTTACCA
ACTATGCTGGTTGCGGCCTTCAGAGCAACATTGGAGGAGATATCAGAATCATCACTTTTG
GTGCATGTGGTGGACATTAGCCATCCACTAGCAGAGCAGCAGATAGATGCTGTGGACAAA
GTTCTGTCAGAATTAGATGTGTTGTCAATTCCAAGATTGATGGTCTGGAACAAGGTTGAT
AAAGCTAGCAATCCTCAAAAAATCAAATTAGAAGCAGAGAAAAGAGAAGATGTTGTCTGC
ATATCTGCTTTAAATGGTGATGGATTGAATGAATTCTGCAATGCAGTTCAGGAAAAATTG
AAGGATTCTATGGTTTGGGTGGAAGCTTTGGTCCCATTTGACAAAGGGGAACTCCTCAGT
ACCATTCATCAGGTTGGAATGGTGGAGAGAACTGAATATACAGAAAACGGGACATTGGTC
AAGGCACATGTTCCCCTTCGGTTCGCAAGGCTACTCACCCCCATGAGGCAACTCTGTAAA
TCATGA

Peptide Sequence

PEP ID

VIT_18s0001g13120.t01
PEP Infomation

pep chromosome:12X:18:11188323:11195903:-1 gene:VIT_18s0001g13120 transcript:VIT_18s0001g13120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLRFPEERRGAMKATVSSCFSSISIIPPSSLVHDPHSPFPPVRLRSIPAFTLRTHTTTS
FRLVRVLQRGVGLVSPDDLSLPEPVIDVKEEEVFAVVDGVAGTKAEEKTLKAPTRVKKKG
GEGESDDNRFKLRNGREVFEEKAYLVAVELKGDMEYSFGIEESLKELAQLADTAGLMVVG
STSQKLSTPNRRTYIGSGKVAEIKSAIHALDVETVIFDDELSAGQLRNLEKAFGGDVRVC
DRTALILDIFNQRAATHEAALQANVALAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQI
EVDKRILRTQIGALKKELESVRQHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNRLTGS
NVLAEDRLFATLDPTTRRVQMKNGREFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLL
VHVVDISHPLAEQQIDAVDKVLSELDVLSIPRLMVWNKVDKASNPQKIKLEAEKREDVVC
ISALNGDGLNEFCNAVQEKLKDSMVWVEALVPFDKGELLSTIHQVGMVERTEYTENGTLV
KAHVPLRFARLLTPMRQLCKS

Transcript Sequence

Transcript ID

VIT_18s0001g13120.t01
Transcript Infomation

cdna chromosome:12X:18:11188323:11195903:-1 gene:VIT_18s0001g13120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAAATTAATCCTTTTGTGTTTTTCCTATTCTAAAAATTGGAAAGACTTAACAATTCTAT
GTATGTTTATATAATTTAATTTGAATCAATTACCCAATCCAACCAAACCAAATTAAAACT
ATTTTAGTTTTATTGAGGAATTGAAGGCGACAAAATGGCTGTATTCTCCTTCAAATTTGA
TTCGTTTGATTTTCAATGTATCTAAATGAATTTTGTTTGTGGGGCCAAATTTAAAATCTG
GATCCACAAAATATCTAGTATTTTAATATATAGTATTTTCATGTTATGAAATTGCGGTTT
CCAGAAGAGAGGAGAGGAGCAATGAAGGCCACCGTGAGTTCTTGCTTTTCTTCTATTTCC
ATCATCCCTCCCTCGTCTCTAGTCCACGACCCTCACTCTCCATTCCCTCCAGTCCGTCTT
CGTTCAATTCCTGCTTTTACTCTCAGAACGCACACCACTACTTCTTTCAGACTCGTCAGA
GTTCTCCAACGAGGAGTTGGACTCGTGTCTCCCGACGACCTGTCTCTACCGGAGCCCGTG
ATTGATGTGAAAGAGGAAGAGGTGTTTGCAGTGGTTGATGGAGTCGCAGGAACCAAAGCG
GAAGAGAAAACCCTAAAGGCCCCCACTAGAGTTAAGAAGAAGGGAGGTGAAGGAGAGAGT
GATGATAATAGGTTCAAGCTGCGTAACGGAAGAGAGGTTTTTGAGGAAAAAGCATACCTT
GTTGCTGTTGAGCTCAAAGGTGACATGGAGTATTCCTTTGGCATAGAAGAATCACTTAAG
GAACTGGCCCAGTTAGCTGACACTGCTGGACTTATGGTTGTTGGTTCTACATCTCAAAAA
CTTAGTACTCCAAATCGAAGGACATATATTGGATCTGGCAAGGTTGCAGAAATTAAGAGT
GCAATCCATGCACTGGATGTTGAGACCGTAATATTTGATGATGAGCTTTCAGCAGGGCAA
TTGCGTAATTTGGAAAAGGCTTTTGGTGGAGATGTTAGAGTCTGTGACCGCACTGCCCTC
ATCCTTGATATCTTTAACCAGCGAGCAGCAACACATGAAGCAGCTTTACAGGCAAATGTT
GCATTGGCACAAATGGAATATCAGTTGCCACGTCTCACGAAGATGTGGACTCACCTTGAG
CGTCAAGCAGGAGGCAAGGTGAAAGGAATGGGTGAGAAACAAATTGAAGTGGATAAGCGT
ATCTTACGCACTCAAATTGGTGCTCTTAAAAAAGAGCTAGAATCAGTTCGGCAACATCGG
AAGCAGTATAGAAACCGGCGTTTCTCTGTGCCCGTTCCTGTTGTATCTTTGGTTGGGTAC
ACAAATGCTGGAAAGAGTACACTCCTAAATAGATTAACTGGGTCTAATGTTCTTGCTGAG
GATCGGTTATTTGCAACACTTGATCCAACTACAAGAAGGGTGCAGATGAAGAATGGTAGG
GAATTTCTTCTCACAGATACAGTTGGATTCATCCAAAAGTTACCAACTATGCTGGTTGCG
GCCTTCAGAGCAACATTGGAGGAGATATCAGAATCATCACTTTTGGTGCATGTGGTGGAC
ATTAGCCATCCACTAGCAGAGCAGCAGATAGATGCTGTGGACAAAGTTCTGTCAGAATTA
GATGTGTTGTCAATTCCAAGATTGATGGTCTGGAACAAGGTTGATAAAGCTAGCAATCCT
CAAAAAATCAAATTAGAAGCAGAGAAAAGAGAAGATGTTGTCTGCATATCTGCTTTAAAT
GGTGATGGATTGAATGAATTCTGCAATGCAGTTCAGGAAAAATTGAAGGATTCTATGGTT
TGGGTGGAAGCTTTGGTCCCATTTGACAAAGGGGAACTCCTCAGTACCATTCATCAGGTT
GGAATGGTGGAGAGAACTGAATATACAGAAAACGGGACATTGGTCAAGGCACATGTTCCC
CTTCGGTTCGCAAGGCTACTCACCCCCATGAGGCAACTCTGTAAATCATGACCCAATTCT
TCTTAGATAACCACTTAATGCTCTAAGTTTGTGGCATAACTCATCATCATCATCTGAGAC
ATTTTTGTATTGTTCGGAAAAAGAGATTCTGATCCCTGTGCTATCGAGCTGTCCTTGTAT
TATCCTTCTGGCCAATGAAAGGCTTGTGTATATAGCATATACCCAGCTCATAGTGTTCCC
TTGGTATAACAAATCTGAAAAAAAATGCGAACAAATGACTTGATGTACTTAAACTGTTTG
TAACAACATACAAGTATGGTTATAAAGCTGCCAATAACGCTGTCTTGGCCCTCTGGTTTT
ATGTAA