Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13070.t01
CDS Infomation

cds chromosome:12X:18:11161718:11165469:-1 gene:VIT_18s0001g13070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTCATGTGCCAACTGTCGTGCCAGTTTCTGGCAACTCCTCTCCAAGTCGGCAAAAGT
TTACCGACGAGTCTCCATCTTCCAAGATTTCTAAAATCGGAATCGTTTCCAGGAGCCTCG
ACCGGTGTTCTACGTTGCTCGACCGAGACTGAAGTTTCGGAGTCTCGGAATAGGATGTTC
ATTCTCGGGATGGGTTTCGTGGGGCAGTTTTTCGCACAAGATCTCAAGAACCACGGATGG
GTTGTCTCTGGGACTTGCACTAGCGCTTTTAAAAAGAAGAAACTCGAAGAGAGGGGATTT
AATATCTACCTCTTTGATGCCAATGAGCCAGAACTGGGAGTACTAAATGCTTTGAAATAT
AGTACGCACCTCCTAGTCTCCATCCCTCCTGTTGTGGGTATTGGTGATCCTATTCTTCAG
CATGATAAATTTCTTAAAAGCAGGATCATGGATGGAGATCTTCAGTGGCTCTGTTATTTG
TCATCAACGAGCGTATATGGAAATTGTGGTGGTGAATTGGTAGATGAAGACTACCCAGCA
AGCCCTGCAAGTGAGTCAGCTAAATTGAGGTTAGCTGCTGAGAAAGGATGGTCAAGTCTG
GGCAGTGAGCTTGGACTCTCAACACAAATATTTCGACTTGGAGGTATCTACGGCCCTGGA
AGAAGTGCTGTTGACACTATAATTAAGCAGGGGCCTTTGACAGAAGGCCAGAGGAAGAGG
ATTTCCAGGCAATACACATCCAGGGTTCATGTTGCGGACATTTGCCAAGCCCTTAAGGCT
ACTATTCAAATACCATCCGTCGGGAAAATTTACAATATAGTTGATGATGACCCTGCCCCA
CGGGCACAAGTATTTGCATTTGCACGGGACTTGATTGAGAAGAAGTGGCCAAACCACATC
AAAGAGAGTGTATTTCCTGGAAGTGCACGGCAGGCCGAGAAGCGCGTCTCCAATGCTCGT
ATGAAGAAGGAACTAGGAGTAACCCTTCTTCATCCAACTTACAGGTCGGGACTACAGAGC
ATTATTGACAATATGGAGAATCCAATTTCAAAGTAG

Peptide Sequence

PEP ID

VIT_18s0001g13070.t01
PEP Infomation

pep chromosome:12X:18:11161718:11165469:-1 gene:VIT_18s0001g13070 transcript:VIT_18s0001g13070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVMCQLSCQFLATPLQVGKSLPTSLHLPRFLKSESFPGASTGVLRCSTETEVSESRNRMF
ILGMGFVGQFFAQDLKNHGWVVSGTCTSAFKKKKLEERGFNIYLFDANEPELGVLNALKY
STHLLVSIPPVVGIGDPILQHDKFLKSRIMDGDLQWLCYLSSTSVYGNCGGELVDEDYPA
SPASESAKLRLAAEKGWSSLGSELGLSTQIFRLGGIYGPGRSAVDTIIKQGPLTEGQRKR
ISRQYTSRVHVADICQALKATIQIPSVGKIYNIVDDDPAPRAQVFAFARDLIEKKWPNHI
KESVFPGSARQAEKRVSNARMKKELGVTLLHPTYRSGLQSIIDNMENPISK

Transcript Sequence

Transcript ID

VIT_18s0001g13070.t01
Transcript Infomation

cdna chromosome:12X:18:11161718:11165469:-1 gene:VIT_18s0001g13070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCGCTTACTTTCAAAGCGATCTCAACCGATAACTTTTTCTTTTTGTCGCCCGATCTTTC
GGGGAAATGGTCATGTGCCAACTGTCGTGCCAGTTTCTGGCAACTCCTCTCCAAGTCGGC
AAAAGTTTACCGACGAGTCTCCATCTTCCAAGATTTCTAAAATCGGAATCGTTTCCAGGA
GCCTCGACCGGTGTTCTACGTTGCTCGACCGAGACTGAAGTTTCGGAGTCTCGGAATAGG
ATGTTCATTCTCGGGATGGGTTTCGTGGGGCAGTTTTTCGCACAAGATCTCAAGAACCAC
GGATGGGTTGTCTCTGGGACTTGCACTAGCGCTTTTAAAAAGAAGAAACTCGAAGAGAGG
GGATTTAATATCTACCTCTTTGATGCCAATGAGCCAGAACTGGGAGTACTAAATGCTTTG
AAATATAGTACGCACCTCCTAGTCTCCATCCCTCCTGTTGTGGGTATTGGTGATCCTATT
CTTCAGCATGATAAATTTCTTAAAAGCAGGATCATGGATGGAGATCTTCAGTGGCTCTGT
TATTTGTCATCAACGAGCGTATATGGAAATTGTGGTGGTGAATTGGTAGATGAAGACTAC
CCAGCAAGCCCTGCAAGTGAGTCAGCTAAATTGAGGTTAGCTGCTGAGAAAGGATGGTCA
AGTCTGGGCAGTGAGCTTGGACTCTCAACACAAATATTTCGACTTGGAGGTATCTACGGC
CCTGGAAGAAGTGCTGTTGACACTATAATTAAGCAGGGGCCTTTGACAGAAGGCCAGAGG
AAGAGGATTTCCAGGCAATACACATCCAGGGTTCATGTTGCGGACATTTGCCAAGCCCTT
AAGGCTACTATTCAAATACCATCCGTCGGGAAAATTTACAATATAGTTGATGATGACCCT
GCCCCACGGGCACAAGTATTTGCATTTGCACGGGACTTGATTGAGAAGAAGTGGCCAAAC
CACATCAAAGAGAGTGTATTTCCTGGAAGTGCACGGCAGGCCGAGAAGCGCGTCTCCAAT
GCTCGTATGAAGAAGGAACTAGGAGTAACCCTTCTTCATCCAACTTACAGGTCGGGACTA
CAGAGCATTATTGACAATATGGAGAATCCAATTTCAAAGTAGATAGAATGACATGATATT
GTCCTTTCACCACTAGTTCATTTAAAGATGTTGGAAGCAGTCATTCTCTTAATGAATTGT
GAAATGCCTCGTATTGTAATGATACCGCAAGAAATAGCACATTACATCGAAAGAGCTCAT
GAAAGGCAGAACATGGGCCCTTTGACTGCAATGTGGAACTTCTCTTTCTCAAAA