Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g13000.t01
CDS Infomation

cds chromosome:12X:18:11105764:11116980:-1 gene:VIT_18s0001g13000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCTCCCAGTTCTTCGTGCTCTCGCAGAGAGGCGATAACATCGTCTTCCGTGACTAT
CGTGGGGAAGTACCTAAAGGAAGTGCAGAGATATTTTTCCGGAAGGTTAAGTTTTGGAAG
GAGGATGGAGAAGGGGATGCACCACCTGTCTTTAATGTGGATGGTGTGAACTACTTTCAC
GTGAAGGTTGCTGGATTGTTATTTGTTGCAACCACAAGAGTTAATGTGTCACCTTCTCTT
GTTCTGGAACTTCTACAAAGGATTGCACGTGTCATCAAAGATTACCTTGGCATTCTAAAT
GAAGATTCATTGCGGAAAAATTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGAT
TTTGGTTATGTGCAAACAACATCTACTGAGGTGTTGAAATCATATGTATTTAATGAGCCC
ATAGTTGTTGATGCTGCACGATTACCAACCCTTGGTCCTGCTTCCATTTTTATGCAAGGA
ACCAAAAGAATGCCAGGGACAGCTGTTACAAAATCTGTTGTAGCAAATGAGCCTGGTGGT
AGAAAGAGGGAAGAAATTTTTGTGGACATAATTGAGAAAATAAGTGTCACATTTAGTTCT
AGTGGATATATACTTACTTCTGAGATTGATGGCACCATTCAAATGAAGAGTTACCTTACA
GGCAATCCAGAAATTCGGCTTGCTCTCAATGAAGAGCTGAGCATAGGGAGGGGTGGAAGG
TCAATTTATGACTATAATAGTTCAACTGGATCCGGGACAGTTATACTAGATGACTGTAAT
TTCCATGAATCTGTGCATCTTGATAGTTTTGACATTGACAGAACGCTTACCCTGGTCCCA
CCAGATGGTGAATTTCCAGTAATGAACTACCGTATGACTCAGGAATTCAAGCCTCCCTTT
CGTATTAATGCTTTGATTGAAGAAGCAGGAGCTCTCCGGGCTGAAGTAATTCTTAAGGTG
CGTGCTGAATTCCCCTCAAGCATTACTGCAAACACAATTCAAGTACAAATGCCACTGCCC
CCATATACAACTAGAGTTAGTTTTGAGTTGGAGCCTGGGGCTGTTGGAAACACAACCGAT
TTTAAGGAAGCAAATAAGAGACTAGAATGGGGTCTAAAGAAGATTGTAGGTGGATCTGAG
CATACTCTACGTGCAAAGCTGACATTTTCACAGGAATTGCATGGAAATATCACAAGGGAA
GCTGGACCTGTTAGCATGACCTTCACAATACCAATGTACAATGCTTCAAGACTTCAGGAA
TTCCAATGGAATCCAGGTGCCACTGCCCATAGGAATGTTACAGGTAAAGTATTTGCAGAT
ATCGAAGAAGTCCAAGGCCTACAATCCATATCGATGGGCCGAAATATCAGCAACTGTATT
GGGTGTCTCAGCAGATGGAATGGTGGCATATGGAGAGCCTGGGGGTCTAGGTCTCCAAAA
GCAGTACTGAGAGAACCGGACGAGGAAGAAGGTTTGGGGTTGGTGAGGGCCTGA

Peptide Sequence

PEP ID

VIT_18s0001g13000.t01
PEP Infomation

pep chromosome:12X:18:11105764:11116980:-1 gene:VIT_18s0001g13000 transcript:VIT_18s0001g13000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH
VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID
FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG
RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR
SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF
RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD
FKEANKRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITREAGPVSMTFTIPMYNASRLQE
FQWNPGATAHRNVTGKVFADIEEVQGLQSISMGRNISNCIGCLSRWNGGIWRAWGSRSPK
AVLREPDEEEGLGLVRA

Transcript Sequence

Transcript ID

VIT_18s0001g13000.t01
Transcript Infomation

cdna chromosome:12X:18:11105764:11116980:-1 gene:VIT_18s0001g13000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAGAACATCAGAGCGAACACAAGATCGGATCGAGAAACTTTAGCAACCATGATCTCCCA
GTTCTTCGTGCTCTCGCAGAGAGGCGATAACATCGTCTTCCGTGACTATCGTGGGGAAGT
ACCTAAAGGAAGTGCAGAGATATTTTTCCGGAAGGTTAAGTTTTGGAAGGAGGATGGAGA
AGGGGATGCACCACCTGTCTTTAATGTGGATGGTGTGAACTACTTTCACGTGAAGGTTGC
TGGATTGTTATTTGTTGCAACCACAAGAGTTAATGTGTCACCTTCTCTTGTTCTGGAACT
TCTACAAAGGATTGCACGTGTCATCAAAGATTACCTTGGCATTCTAAATGAAGATTCATT
GCGGAAAAATTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGT
GCAAACAACATCTACTGAGGTGTTGAAATCATATGTATTTAATGAGCCCATAGTTGTTGA
TGCTGCACGATTACCAACCCTTGGTCCTGCTTCCATTTTTATGCAAGGAACCAAAAGAAT
GCCAGGGACAGCTGTTACAAAATCTGTTGTAGCAAATGAGCCTGGTGGTAGAAAGAGGGA
AGAAATTTTTGTGGACATAATTGAGAAAATAAGTGTCACATTTAGTTCTAGTGGATATAT
ACTTACTTCTGAGATTGATGGCACCATTCAAATGAAGAGTTACCTTACAGGCAATCCAGA
AATTCGGCTTGCTCTCAATGAAGAGCTGAGCATAGGGAGGGGTGGAAGGTCAATTTATGA
CTATAATAGTTCAACTGGATCCGGGACAGTTATACTAGATGACTGTAATTTCCATGAATC
TGTGCATCTTGATAGTTTTGACATTGACAGAACGCTTACCCTGGTCCCACCAGATGGTGA
ATTTCCAGTAATGAACTACCGTATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGC
TTTGATTGAAGAAGCAGGAGCTCTCCGGGCTGAAGTAATTCTTAAGGTGCGTGCTGAATT
CCCCTCAAGCATTACTGCAAACACAATTCAAGTACAAATGCCACTGCCCCCATATACAAC
TAGAGTTAGTTTTGAGTTGGAGCCTGGGGCTGTTGGAAACACAACCGATTTTAAGGAAGC
AAATAAGAGACTAGAATGGGGTCTAAAGAAGATTGTAGGTGGATCTGAGCATACTCTACG
TGCAAAGCTGACATTTTCACAGGAATTGCATGGAAATATCACAAGGGAAGCTGGACCTGT
TAGCATGACCTTCACAATACCAATGTACAATGCTTCAAGACTTCAGGAATTCCAATGGAA
TCCAGGTGCCACTGCCCATAGGAATGTTACAGGTAAAGTATTTGCAGATATCGAAGAAGT
CCAAGGCCTACAATCCATATCGATGGGCCGAAATATCAGCAACTGTATTGGGTGTCTCAG
CAGATGGAATGGTGGCATATGGAGAGCCTGGGGGTCTAGGTCTCCAAAAGCAGTACTGAG
AGAACCGGACGAGGAAGAAGGTTTGGGGTTGGTGAGGGCCTGAGGGACGAATCCCCTGCA
CGCATCTGGCATAAGGAGTTGTGAACATGCACGAAGATAAGACGGGCTCAAAATTGGAGA
TCCCTTATTTCTTTCCTTTTGTCTAGGGGTGGGTGTCTACCTATTTTTCAGAATTGTCCA
TTACTGAGCAATGAGTCTGTCTTCTGGGACACCATTGAGTTCAAATTTCACCACATGAGG
CCAATTTTAAGGAGGCGGTCTCTCTCCTTTTTCCTTTCTCCAACCCAGCCTAATTCTTCT
TTCTTCATACCACGGATGGGCTTCAACAGGCTTCAAAAATGAAAATGGATAATTCCTCCT
GAGACCTTAATTGGGGGCTTTGGGCCATTTACTTTGAAAGTG