Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12950.t01
CDS Infomation

cds chromosome:12X:18:11035878:11042058:-1 gene:VIT_18s0001g12950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCGGCCCACTTGACCGATTCGCCAGGCCTTGTTTTGAGGGGGCCAATCACGATGAA
CGAAGAGAACGGAAATCGGATTTCGAAAACTCGGAAGATGACAGGAGGACCAGAATTGGG
AATCTTAAGAAGAAAGCAATCAATGCCTCCAGTAAATTCAAGCATTCTCTCAAGAAAAAG
GGCAGGAGAAAGTCTCACGATCACCTCCTTTCTGTTTCCATCAAGGATGTTCGAGATGTG
GAGGAGCTTCAAGCTGTGGAAGCATTTCGACAGGCGCTCATTTCCGATGACTTGCTTCCC
GATAGACATGATGACTATCATATGCTCTTGAGATTTTTGAAAGCCAGGAAGTTTGATATG
GAAAAGGCGAAGCACATGTGGACCGAAATGATTCACTGGAGGAAAAACTTCGGCACCGAC
ACTATCTTGGAGGATTTTGAGTTCAAAGAGTTGAACGAAGTACTCAAGTACTATCCTCAG
GGTTATCACGGTGTGGATAAGGAGGGGAGACCCGTTTATATTGAAAGACTTGGAAAAGTT
GATTCAAACAAGCTGGTTCAAGTCACAACTTTGGATCGGTATGTGAAATACCATGTGCAG
GAATTTGAAAAGTGTTTTGCATTTAAGTTTCCTGCTTGCTCTGTTGCAGCAAAGAGGCAC
ATTGATTCAAATACAACACTTTTAGATGTTCAAGGCGTGGGTTTTAAGAACCTAACCAAA
AATGCAAGAGACCTCATTATGCGGTTGCAGAAAATTGATGGAGACAACTATCCCGAGACA
CTTTGCCAAATGTTTATCATTAATGCTGGTCCAGGTTTTAGGCTGCTCTGGAACACCGTG
AAGACTTTTCTTGATCCAAAAACAACTTCCAAGATTCATGTTCTTGGTAATAAGTACCAG
AGCAAATTGCTTGAAATAATTGATGCAAGTGAGTTGCCCGAATTTCTCGGTGGTAGCTGT
ATCTGTGCAGATCAGGGAGGTTGTTTGAAGTCTGATAAGGGGCCGTGGAAAGATCCAAAC
ATATTAAAGATGGTTCTCAGTGGTGAAGCACAATTTTCTAGACGAATAGTAACTGTTTCA
AACAGTGATGGAAGAGTAATCACTAAAGAAAAGCCAATTTATTCAGTGATAAAAAGCAGT
GACACATCTACGGCAGAGTCAGGATCCGAAGTGGAAGAATTCACTTCTCCCGAAGTAACA
AGGGGCTATCTGCATCCAAGGTTGACTCCTGTCCGTGAAGAAGTTAGGATGGCTGGAAAG
GTAAACTCTGCTGGTGGCTTTTCTGAATATGATGAAGTGCCCATGGTTGATAAGGCTGTG
GATGCGGAATGGAAGAAGCAACTCTCCCTTCAAGACCCTTGTGATTCAAGAGGGATACTT
TCTCTGCCAAGAGCAGAAAAGACTCCAGAAGGTTTGTGTGCTAAAATTTGGGGTGTGTTG
ATAACCTTCTTCCTAGCCCTTGCTACTCTTTTCCATTCAGTAGCATCCCGGGTGACTAAG
AAACTTCCTGATTCTGTGTCCAATTCTGGCCACAACATTCCCAACCTGACACTTGAACCA
ATTTCTGAGGAGGAGTTACGTCCTCCTTCACCAGCTCCAAGGTTGACAGAGGCAGACCTT
TTCTCATCTGTTCTGAAAAGGGTGGGCGAGCTTGAGGAGAAGGTGGACTTGCTGCAGGCA
AAGCCATTCAAGATGCCTCATGAGAAAGAAGAGTTGCTGAATGCTGCTGTTTGTAGGGTG
GATGCCTTAGAAGCAGAGCTAATTGCTACAAAGAAGGCTTTGCATGAAGCTTTAATGAGA
CAAGAAGAACTTCTTGCATACATAGACAGGCAAGAAGAAGCCAAGTCCCAGAAAAAGAAG
TTTTGTTGGTGA

Peptide Sequence

PEP ID

VIT_18s0001g12950.t01
PEP Infomation

pep chromosome:12X:18:11035878:11042058:-1 gene:VIT_18s0001g12950 transcript:VIT_18s0001g12950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGPLDRFARPCFEGANHDERRERKSDFENSEDDRRTRIGNLKKKAINASSKFKHSLKKK
GRRKSHDHLLSVSIKDVRDVEELQAVEAFRQALISDDLLPDRHDDYHMLLRFLKARKFDM
EKAKHMWTEMIHWRKNFGTDTILEDFEFKELNEVLKYYPQGYHGVDKEGRPVYIERLGKV
DSNKLVQVTTLDRYVKYHVQEFEKCFAFKFPACSVAAKRHIDSNTTLLDVQGVGFKNLTK
NARDLIMRLQKIDGDNYPETLCQMFIINAGPGFRLLWNTVKTFLDPKTTSKIHVLGNKYQ
SKLLEIIDASELPEFLGGSCICADQGGCLKSDKGPWKDPNILKMVLSGEAQFSRRIVTVS
NSDGRVITKEKPIYSVIKSSDTSTAESGSEVEEFTSPEVTRGYLHPRLTPVREEVRMAGK
VNSAGGFSEYDEVPMVDKAVDAEWKKQLSLQDPCDSRGILSLPRAEKTPEGLCAKIWGVL
ITFFLALATLFHSVASRVTKKLPDSVSNSGHNIPNLTLEPISEEELRPPSPAPRLTEADL
FSSVLKRVGELEEKVDLLQAKPFKMPHEKEELLNAAVCRVDALEAELIATKKALHEALMR
QEELLAYIDRQEEAKSQKKKFCW

Transcript Sequence

Transcript ID

VIT_18s0001g12950.t01
Transcript Infomation

cdna chromosome:12X:18:11035878:11042058:-1 gene:VIT_18s0001g12950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAAATTTCCTCTCTCTCTCTCCTTCCCTTTGAGTCCTTGACGCGGTGATCCATCCTGA
GATCCAATTCTTCATCTGAATTCAGAGAATTGGAGTTTCTGTCGGCGGTCGGAGTCGCCG
AATATTTGATCGGAGAGCATCGACATGTCCGGCCCACTTGACCGATTCGCCAGGCCTTGT
TTTGAGGGGGCCAATCACGATGAACGAAGAGAACGGAAATCGGATTTCGAAAACTCGGAA
GATGACAGGAGGACCAGAATTGGGAATCTTAAGAAGAAAGCAATCAATGCCTCCAGTAAA
TTCAAGCATTCTCTCAAGAAAAAGGGCAGGAGAAAGTCTCACGATCACCTCCTTTCTGTT
TCCATCAAGGATGTTCGAGATGTGGAGGAGCTTCAAGCTGTGGAAGCATTTCGACAGGCG
CTCATTTCCGATGACTTGCTTCCCGATAGACATGATGACTATCATATGCTCTTGAGATTT
TTGAAAGCCAGGAAGTTTGATATGGAAAAGGCGAAGCACATGTGGACCGAAATGATTCAC
TGGAGGAAAAACTTCGGCACCGACACTATCTTGGAGGATTTTGAGTTCAAAGAGTTGAAC
GAAGTACTCAAGTACTATCCTCAGGGTTATCACGGTGTGGATAAGGAGGGGAGACCCGTT
TATATTGAAAGACTTGGAAAAGTTGATTCAAACAAGCTGGTTCAAGTCACAACTTTGGAT
CGGTATGTGAAATACCATGTGCAGGAATTTGAAAAGTGTTTTGCATTTAAGTTTCCTGCT
TGCTCTGTTGCAGCAAAGAGGCACATTGATTCAAATACAACACTTTTAGATGTTCAAGGC
GTGGGTTTTAAGAACCTAACCAAAAATGCAAGAGACCTCATTATGCGGTTGCAGAAAATT
GATGGAGACAACTATCCCGAGACACTTTGCCAAATGTTTATCATTAATGCTGGTCCAGGT
TTTAGGCTGCTCTGGAACACCGTGAAGACTTTTCTTGATCCAAAAACAACTTCCAAGATT
CATGTTCTTGGTAATAAGTACCAGAGCAAATTGCTTGAAATAATTGATGCAAGTGAGTTG
CCCGAATTTCTCGGTGGTAGCTGTATCTGTGCAGATCAGGGAGGTTGTTTGAAGTCTGAT
AAGGGGCCGTGGAAAGATCCAAACATATTAAAGATGGTTCTCAGTGGTGAAGCACAATTT
TCTAGACGAATAGTAACTGTTTCAAACAGTGATGGAAGAGTAATCACTAAAGAAAAGCCA
ATTTATTCAGTGATAAAAAGCAGTGACACATCTACGGCAGAGTCAGGATCCGAAGTGGAA
GAATTCACTTCTCCCGAAGTAACAAGGGGCTATCTGCATCCAAGGTTGACTCCTGTCCGT
GAAGAAGTTAGGATGGCTGGAAAGGTAAACTCTGCTGGTGGCTTTTCTGAATATGATGAA
GTGCCCATGGTTGATAAGGCTGTGGATGCGGAATGGAAGAAGCAACTCTCCCTTCAAGAC
CCTTGTGATTCAAGAGGGATACTTTCTCTGCCAAGAGCAGAAAAGACTCCAGAAGGTTTG
TGTGCTAAAATTTGGGGTGTGTTGATAACCTTCTTCCTAGCCCTTGCTACTCTTTTCCAT
TCAGTAGCATCCCGGGTGACTAAGAAACTTCCTGATTCTGTGTCCAATTCTGGCCACAAC
ATTCCCAACCTGACACTTGAACCAATTTCTGAGGAGGAGTTACGTCCTCCTTCACCAGCT
CCAAGGTTGACAGAGGCAGACCTTTTCTCATCTGTTCTGAAAAGGGTGGGCGAGCTTGAG
GAGAAGGTGGACTTGCTGCAGGCAAAGCCATTCAAGATGCCTCATGAGAAAGAAGAGTTG
CTGAATGCTGCTGTTTGTAGGGTGGATGCCTTAGAAGCAGAGCTAATTGCTACAAAGAAG
GCTTTGCATGAAGCTTTAATGAGACAAGAAGAACTTCTTGCATACATAGACAGGCAAGAA
GAAGCCAAGTCCCAGAAAAAGAAGTTTTGTTGGTGAAGAAGAGATTGCTGCAGAGGACCA
CTTGTTTAGCGGCATGTTAACTTATCGCGTTTCAATACATATATATTTGGATTCACACCA
AATGTCTTAAAGGGAGGGTTACCAATTTTAACAACGAGGTTTTATATGTTTGAAGGATTA
AAAAATTGTTGTAAATAAAAGCCCATGCCATGCGCCCCCTCACAAACATACTCTTTTCAA
TAATGGTTTAGGGTAATAATGGTTCCTTGGATTGCCTCAGGGCCTGCGTGCCTTTTATTT
TCACTATAACCAAGCTGATACTCTTTCTCCGTACTAGAATGGTAAT