Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12880.t01
CDS Infomation

cds chromosome:12X:18:10974280:10990318:-1 gene:VIT_18s0001g12880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGTGATGCAAAAGCTTCACATGAACGGCGGATCTGGGGAGACCAGTTATGCGAAG
AACTCGTCGGTTCAGAGCAACATTATATCTGCTGGGAAGCGCATAACTGAGGAAGCTATA
CTAGACATGTTGAGCAACCACTTGTCTGCAGACAGCATAGGCATTGGGGATTTGGGATGC
TCATCTGGACCCAACACCTTATTGGTGATATCAGAGATATTGAACGTCATATATGCCAAA
TGGTGCCTGCAGGGCTGTGGTTCATCACCGGAGTTTAGGGTGTACTTGAACGATCTTACC
ACCAATGACTTCAATAATGTATTTGGCTCACTCCCAGCTTTTTACACCAAATTGAAGGAA
GAAAAGGGTTCAGGATTCGGGCCATGTTTTATAGTTGGGATGCCTGGTTCATTTTATGGG
AGGCTGTTCCCAACCAAGAGTATGCACTTTGTGCACTCCTCTTCCAGCCTTCATTGGCTC
TCTCAGGTTCCACTTGGTTTGGACAGCAAGGCCACCACACACAACAGGGGAAAGATTTAT
ATATCAAAGACAAGCCCGCTTTGCGTTCTGGAAGCATACTTGATTCAATTCCAGAAGGAC
TTCTCACTATTTCTCAAGTCACGATCGGAAGAGATAGTTCCCAAAGGACGCATGGTATTG
TCATTCATGGGTAGGAGATCTCCAGATCCCGCTGCAGATGAGAGTTGCTACCAATTTGAA
CTCTTAGCACGAGCACTAATGAGCATGGTCTCAGAGGGCCTTGTTGAAGAAGAGAAGGCC
GATTCTTTCAATTTGCCCTTCTACACACCGTCTCCTGAAGAAGTGGACTTTGAGATACAA
AAAGAAGGATCATTCATCCTCGACCGCCTCGAGACTTTTGAAATTGATTGGATTAATGGA
AATGATGGGAATAGTTCTGTGAGTGAAGGTGTGTATCCCACATCGGAAGCACTATCGAGG
GGCCATGGACACTCAAAGATTATTAGAGCTGTGGTGGAGTCCATGCTGGAATTCCACTTT
GGAGGACATATAATGGATGATCTATTTAAAAGGTATGGCGACATTGTGGATGATCACTTG
TCAAAGACTACACCCAAGTACATCGTTTTGGTTATTTCCCTTGTCAAAAAAGGTTAA

Peptide Sequence

PEP ID

VIT_18s0001g12880.t01
PEP Infomation

pep chromosome:12X:18:10974280:10990318:-1 gene:VIT_18s0001g12880 transcript:VIT_18s0001g12880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVMQKLHMNGGSGETSYAKNSSVQSNIISAGKRITEEAILDMLSNHLSADSIGIGDLGC
SSGPNTLLVISEILNVIYAKWCLQGCGSSPEFRVYLNDLTTNDFNNVFGSLPAFYTKLKE
EKGSGFGPCFIVGMPGSFYGRLFPTKSMHFVHSSSSLHWLSQVPLGLDSKATTHNRGKIY
ISKTSPLCVLEAYLIQFQKDFSLFLKSRSEEIVPKGRMVLSFMGRRSPDPAADESCYQFE
LLARALMSMVSEGLVEEEKADSFNLPFYTPSPEEVDFEIQKEGSFILDRLETFEIDWING
NDGNSSVSEGVYPTSEALSRGHGHSKIIRAVVESMLEFHFGGHIMDDLFKRYGDIVDDHL
SKTTPKYIVLVISLVKKG

Transcript Sequence

Transcript ID

VIT_18s0001g12880.t01
Transcript Infomation

cdna chromosome:12X:18:10974280:10990318:-1 gene:VIT_18s0001g12880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAAATGTAGAAGCTAGAGTACATGTACTTTGTGATCAACATACAATAAATTTCTTGATG
TTCCGTTAGTACTTCCCTCTCTCTATTTCTCTTCTCTCTCCACACCATCATACCCACGAC
GGCGGCCCTTCTCACCACCGACGACTCCACTGTCGGCCGACACTCCTTTCCGAAACCGGC
GTTCCCCCCTCCGGCCATATCTTATCTCTCTCTTTTTCACACCATACCCACGGCTCCCAT
GTCATCACCCCACTGTGAGCACCGCCATCACCATCCATTGTGAAGTTCACCACAAGTGGC
TATTTTCGCTTCAACGCCGAACCACGTGGTGTAAGTTACGATATAGCATCAGCATTCCCT
ATTATTCACCGGAGTTTTTAGGGCGTGGACAGAGATGGAAGTGATGCAAAAGCTTCACAT
GAACGGCGGATCTGGGGAGACCAGTTATGCGAAGAACTCGTCGGTTCAGAGCAACATTAT
ATCTGCTGGGAAGCGCATAACTGAGGAAGCTATACTAGACATGTTGAGCAACCACTTGTC
TGCAGACAGCATAGGCATTGGGGATTTGGGATGCTCATCTGGACCCAACACCTTATTGGT
GATATCAGAGATATTGAACGTCATATATGCCAAATGGTGCCTGCAGGGCTGTGGTTCATC
ACCGGAGTTTAGGGTGTACTTGAACGATCTTACCACCAATGACTTCAATAATGTATTTGG
CTCACTCCCAGCTTTTTACACCAAATTGAAGGAAGAAAAGGGTTCAGGATTCGGGCCATG
TTTTATAGTTGGGATGCCTGGTTCATTTTATGGGAGGCTGTTCCCAACCAAGAGTATGCA
CTTTGTGCACTCCTCTTCCAGCCTTCATTGGCTCTCTCAGGTTCCACTTGGTTTGGACAG
CAAGGCCACCACACACAACAGGGGAAAGATTTATATATCAAAGACAAGCCCGCTTTGCGT
TCTGGAAGCATACTTGATTCAATTCCAGAAGGACTTCTCACTATTTCTCAAGTCACGATC
GGAAGAGATAGTTCCCAAAGGACGCATGGTATTGTCATTCATGGGTAGGAGATCTCCAGA
TCCCGCTGCAGATGAGAGTTGCTACCAATTTGAACTCTTAGCACGAGCACTAATGAGCAT
GGTCTCAGAGGGCCTTGTTGAAGAAGAGAAGGCCGATTCTTTCAATTTGCCCTTCTACAC
ACCGTCTCCTGAAGAAGTGGACTTTGAGATACAAAAAGAAGGATCATTCATCCTCGACCG
CCTCGAGACTTTTGAAATTGATTGGATTAATGGAAATGATGGGAATAGTTCTGTGAGTGA
AGGTGTGTATCCCACATCGGAAGCACTATCGAGGGGCCATGGACACTCAAAGATTATTAG
AGCTGTGGTGGAGTCCATGCTGGAATTCCACTTTGGAGGACATATAATGGATGATCTATT
TAAAAGGTATGGCGACATTGTGGATGATCACTTGTCAAAGACTACACCCAAGTACATCGT
TTTGGTTATTTCCCTTGTCAAAAAAGGTTAATATATATATATATATATATATATATATAA
AGCAAGGCAAGTGCGACTTATTTGAGAGAATTCTGCAGACTTAAATTTATTTTTCTTAAA
TGATTTTGTGATGTTGGTGTATCTGTTGGTATTGGTTCTAGTAATCAA