Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12780.t01
CDS Infomation

cds chromosome:12X:18:10891362:10903342:-1 gene:VIT_18s0001g12780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCCATTACTTCTCACTGTGCTCTGCGATCAGACTGTGCTCCCTTCTCCTCCTCC
TCTTCGTCTTTCTCCGGCCAGGCTTTTCGCCAACCTGCTCCTTTTCCCGGCATTTCCTTG
TCTTCCTCGGCAATTTCTCCGACACTCCGCCGCCGCATCTCTTGTCAGACATCCTCTGCG
ATTTCACCTTCATCTGCCGTCAATGTAAAAGAAAAATCAGGGCTCAAGGATTTTCTTCAC
ATTAATGATTTTGACAAAACTACTATTTTGAAGATCCTAGATCGTGCCTTGGAGGTCAAG
GCACTGCTAAAGTCAGGAGAAAGGACATTTCTCCCATTTAAAGGGAAGACAATGGCAATG
ATATTTGCAAAGCCGTCCATGAGAACACGGGTTTCATTTGAGACTGGATTTTTCTTGCTT
GGAGGTCATGCTTTATATCTAGGACCAGATGATATCCAGATGGGTAAACGGGAGGAAACT
CGTGATGTTGCTCGTGTGCTGTCTTGTTATAATGACATCATTATGGCACGTGTTTTTGCT
CATCAGGACATTCTTGATCTGGCTAAATATGCAACTGTACCTGTCATCAATGGCCTGACA
GACTACAATCATCCCTGCCAAATAATGGCTGATGCCCTCACAATAATTGAACACATTGGT
CAGTTGGAAGGAACTAAGGTTGTCTATGTTGGGGATGGGAACAACATTGTGCATTCCTGG
CTGCTGCTGGCTGCAGTTGTTCCCTTCCATTTTGTCTGTGCCTGTCCTAAAGGTTTTGAA
CCAGATGAGAAAACGGTTCAGAAGGCACAACAGGCTGGAATTAGCAAGATTGAGATAACA
AATGATCCAAAAGAAGCTGTTAGAGGAGCAGATGTTGTATACTCAGATGTTTGGGCTAGC
ATGGGGCAAAAGGAAGAGGCCTCATATCGCCGGCAAGTGTTTCAAGGATTTCAGGTGGAT
GAACCCCTTATGAAGTTAGCCGGGCCAAAAGCCTATTTCATGCATTGTTTACCGGCTGAA
AGAGGCGTGGAGGTGACTGATGGGGTTCTTGAAGCGCCAAATTCCATTGTCTTCCCACAA
GCAGAGAACCGCATGCATGCACAGAATGCCATAATGCTTCATGTGCTTGGCTTGTGA

Peptide Sequence

PEP ID

VIT_18s0001g12780.t01
PEP Infomation

pep chromosome:12X:18:10891362:10903342:-1 gene:VIT_18s0001g12780 transcript:VIT_18s0001g12780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAITSHCALRSDCAPFSSSSSSFSGQAFRQPAPFPGISLSSSAISPTLRRRISCQTSSA
ISPSSAVNVKEKSGLKDFLHINDFDKTTILKILDRALEVKALLKSGERTFLPFKGKTMAM
IFAKPSMRTRVSFETGFFLLGGHALYLGPDDIQMGKREETRDVARVLSCYNDIIMARVFA
HQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHIGQLEGTKVVYVGDGNNIVHSW
LLLAAVVPFHFVCACPKGFEPDEKTVQKAQQAGISKIEITNDPKEAVRGADVVYSDVWAS
MGQKEEASYRRQVFQGFQVDEPLMKLAGPKAYFMHCLPAERGVEVTDGVLEAPNSIVFPQ
AENRMHAQNAIMLHVLGL

Transcript Sequence

Transcript ID

VIT_18s0001g12780.t01
Transcript Infomation

cdna chromosome:12X:18:10891362:10903342:-1 gene:VIT_18s0001g12780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAAAAGCAATGGCCGCCATTACTTCTCACTGTGCTCTGCGATCAGACTGTGCTCCCTT
CTCCTCCTCCTCTTCGTCTTTCTCCGGCCAGGCTTTTCGCCAACCTGCTCCTTTTCCCGG
CATTTCCTTGTCTTCCTCGGCAATTTCTCCGACACTCCGCCGCCGCATCTCTTGTCAGAC
ATCCTCTGCGATTTCACCTTCATCTGCCGTCAATGTAAAAGAAAAATCAGGGCTCAAGGA
TTTTCTTCACATTAATGATTTTGACAAAACTACTATTTTGAAGATCCTAGATCGTGCCTT
GGAGGTCAAGGCACTGCTAAAGTCAGGAGAAAGGACATTTCTCCCATTTAAAGGGAAGAC
AATGGCAATGATATTTGCAAAGCCGTCCATGAGAACACGGGTTTCATTTGAGACTGGATT
TTTCTTGCTTGGAGGTCATGCTTTATATCTAGGACCAGATGATATCCAGATGGGTAAACG
GGAGGAAACTCGTGATGTTGCTCGTGTGCTGTCTTGTTATAATGACATCATTATGGCACG
TGTTTTTGCTCATCAGGACATTCTTGATCTGGCTAAATATGCAACTGTACCTGTCATCAA
TGGCCTGACAGACTACAATCATCCCTGCCAAATAATGGCTGATGCCCTCACAATAATTGA
ACACATTGGTCAGTTGGAAGGAACTAAGGTTGTCTATGTTGGGGATGGGAACAACATTGT
GCATTCCTGGCTGCTGCTGGCTGCAGTTGTTCCCTTCCATTTTGTCTGTGCCTGTCCTAA
AGGTTTTGAACCAGATGAGAAAACGGTTCAGAAGGCACAACAGGCTGGAATTAGCAAGAT
TGAGATAACAAATGATCCAAAAGAAGCTGTTAGAGGAGCAGATGTTGTATACTCAGATGT
TTGGGCTAGCATGGGGCAAAAGGAAGAGGCCTCATATCGCCGGCAAGTGTTTCAAGGATT
TCAGGTGGATGAACCCCTTATGAAGTTAGCCGGGCCAAAAGCCTATTTCATGCATTGTTT
ACCGGCTGAAAGAGGCGTGGAGGTGACTGATGGGGTTCTTGAAGCGCCAAATTCCATTGT
CTTCCCACAAGCAGAGAACCGCATGCATGCACAGAATGCCATAATGCTTCATGTGCTTGG
CTTGTGA