Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12760.t01
CDS Infomation

cds chromosome:12X:18:10874439:10879285:-1 gene:VIT_18s0001g12760 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:F6H059]
Sequence

ATGTTCAGGAACCAGTACGACACGGACGTGACCACATGGAGCCCAGCCGGCAGACTCTTT
CAAGTGGAGTATGCCATGGAAGCCGTGAAGCAAGGGTCTGCTGCCATTGGCCTCCGATCC
AAGACTCATGTCGTCTTGGCTTGTGTCAACAAGGCTAACTCCGAGCTCTCTTCTCACCAG
AAGAAGATCTTCAAGGTCGACGACCACATCGGAGTAGCCATCGCAGGCCTCACCGCCGAT
GGCAGAGTCCTCTCTCGGTACATGCGATCCGAATGCATCAACTACAGCTTCACTTACGAG
TCTCCGCTTCCTGTTGGTCGACTGGTTGTTCAGCTTGCCGACAAGGCTCAGGTTTGCACC
CAAAGGTCCTGGAAACGGCCCTATGGTGTTGGTCTGCTTGTAGCTGGCTTGGATGAATCG
GGGGCTCACCTCTATTACAACTGCCCAAGTGGGAATTACTTTGAATATCAGGCTTTTGCT
ATTGGATCCCGCTCACAGGCTGCAAAGACGTATTTGGAACGCAGGTTTGGGACGTTCCAA
AACTCTTCACGAGAAGATCTTATCAAGGATGCACTTTTTGCAATAAGAGAAACCTTGCAA
GGAGAAAAGCTTAAGAGCTCCATTTGCACAGTCACAGTGCTTGGAGTGGGGGAGCCTTTC
CATATATTGGATCAGGAAACAGTGCAGGGGTTAATTAATGCATTTGAGATGGCAGGGGAG
GAGGCTCCTGCTGCGGACCAGGGTGCTGCTGGTGAAGAGGGTGCTGCTGGTGAAGTGGTT
GCTGCCGCAGAAGAGGGTGCTGCTCCTGAAGAGGGTGCTGCTACTGAAGAGGGTGCTGCT
CCAATGGATATCTGA

Peptide Sequence

PEP ID

VIT_18s0001g12760.t01
PEP Infomation

pep chromosome:12X:18:10874439:10879285:-1 gene:VIT_18s0001g12760 transcript:VIT_18s0001g12760.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:F6H059]
Sequence

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCT
QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFGTFQ
NSSREDLIKDALFAIRETLQGEKLKSSICTVTVLGVGEPFHILDQETVQGLINAFEMAGE
EAPAADQGAAGEEGAAGEVVAAAEEGAAPEEGAATEEGAAPMDI

Transcript Sequence

Transcript ID

VIT_18s0001g12760.t01
Transcript Infomation

cdna chromosome:12X:18:10874439:10879285:-1 gene:VIT_18s0001g12760 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:F6H059]
Sequence

GAAGATCAAAGGGGAGGGCTCTACAAAAAAACTAGAGTGTGTGTCTCTGTGAAGTGAAAC
GGCGTTGTGAAAATGTTCAGGAACCAGTACGACACGGACGTGACCACATGGAGCCCAGCC
GGCAGACTCTTTCAAGTGGAGTATGCCATGGAAGCCGTGAAGCAAGGGTCTGCTGCCATT
GGCCTCCGATCCAAGACTCATGTCGTCTTGGCTTGTGTCAACAAGGCTAACTCCGAGCTC
TCTTCTCACCAGAAGAAGATCTTCAAGGTCGACGACCACATCGGAGTAGCCATCGCAGGC
CTCACCGCCGATGGCAGAGTCCTCTCTCGGTACATGCGATCCGAATGCATCAACTACAGC
TTCACTTACGAGTCTCCGCTTCCTGTTGGTCGACTGGTTGTTCAGCTTGCCGACAAGGCT
CAGGTTTGCACCCAAAGGTCCTGGAAACGGCCCTATGGTGTTGGTCTGCTTGTAGCTGGC
TTGGATGAATCGGGGGCTCACCTCTATTACAACTGCCCAAGTGGGAATTACTTTGAATAT
CAGGCTTTTGCTATTGGATCCCGCTCACAGGCTGCAAAGACGTATTTGGAACGCAGGTTT
GGGACGTTCCAAAACTCTTCACGAGAAGATCTTATCAAGGATGCACTTTTTGCAATAAGA
GAAACCTTGCAAGGAGAAAAGCTTAAGAGCTCCATTTGCACAGTCACAGTGCTTGGAGTG
GGGGAGCCTTTCCATATATTGGATCAGGAAACAGTGCAGGGGTTAATTAATGCATTTGAG
ATGGCAGGGGAGGAGGCTCCTGCTGCGGACCAGGGTGCTGCTGGTGAAGAGGGTGCTGCT
GGTGAAGTGGTTGCTGCCGCAGAAGAGGGTGCTGCTCCTGAAGAGGGTGCTGCTACTGAA
GAGGGTGCTGCTCCAATGGATATCTGAGGATTCAGGAACTGCCAACCAATGGATATCTGA
GGATTCAGGAACTGCCAACCATCTCTGTTCCTTTGGAAATGAGGTAATGGTTGTAGATGC
CACCCTGGACGACATCATTTTCTTGTTGGATTTTTTTTTGTTATGCAATTTGTCTCTGCT
TCATCATTGCAAACATTTTCAAGTTATAGCCTCTGGTGAACTTCATTTCACATATAGTTT
TGTGGTGGATCCTATTTGG