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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12660.t01
CDS Infomation

cds chromosome:12X:18:10828053:10830740:-1 gene:VIT_18s0001g12660 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H054]
Sequence

ATGCATTTTAAAAGCATTGTTCGCGAGCTTAGGGACATGAGAGATAGTATAGGAAACTCG
TCGAGAAGGAGAGCAGAGGGGAAGCACACGAACCGTCGTGGAAGATCGCATATAGCCCCT
GAAGGGTCTCCATCTTCATCTGCACTCTTTCAACAACAAAGTCAGTGGGCTAACATGCCT
CCCGAATTGCTTCTTGATATAATCCAGAGGGTGGAAGCCGCCGAGGCTTCATGGCCTGCC
CGTCGGGATGTTGTTTCTTGTGGATCAGTTTGTAGGTCATGGCGGGATATCACCAAAGAG
ATAGTCAAGACTCCCGAGCAATGTGGTTGCCTCACGTTCCCTATTTCATTGAAGCAGCCT
GGGCCAAGGGAATCCCAAATTCAATGCTTTATCAAGAGAGAAAGGGCGACTTCAACTTTC
CGATTGTATCTTGGTCTGAGCCCTGCCCTATCGGGGGATGCCAGTAAATTATTATTGGCT
GCCAGAAAGATCAGAAGGGCGACGAGCACGGAGTTTGTGATATCCTTGCTTGGGGACGAT
TTCTCTCGAGCAACCAATGCATATGTTGGAAAATTAAAGTCTAATTTTCTGGGTACTAAA
TTCACCATCTACGACAGTCAGCCGCCACATGACCCTGCAGTCCAGTCGAATTGTCAGTCA
AACGGAAGATTACATTCAAAGCAGGGGTCTACCAGGTCACCCAGTGGTAACTATAATGTG
GCCACCATATCTTATGAGCTCAACGTTCTGCGTACCAGAGGCCCTAGGAGAATGCACTGC
ACCATGCATTGGATCCCCATCTCTGCAATTCAGGAAGGTGGCACCGCCCCAACTCCAATG
ACATTTGCAAAATGCCAAAAGGATCAATTTCCTCAGTCAGCGGATCCAAAAGGAAAGAAC
CCACTCATTGAGTTTAGCTCCAACAGTCTTGCTGAGACACCAGAATCCATCCAAGACACG
AGAAATCCACTGGTTTTGAAAAATAAAGCTCCTAGATGGCATGAGCAGCTGCAATGCTGG
TGCCTGAATTTCAAAGGACGTGTTACAGTGGCCTCCGTAAAAAATTTCCAGCTGGTGGCA
GCTGTGGAGCCTTGCCAAAATGTCTCTGTGGCAGAGCAAGAAAAAGTAATACTACAGTTT
GGAAAGATTGGGAAAGACATATTCACCATGGATTATCGATACCCCCTCTCTGCCTTCCAA
GCATTTGCAATCTGCTTGAGCAGCTTTGACACTAAACCAGCCTGTGAATGA

Peptide Sequence

PEP ID

VIT_18s0001g12660.t01
PEP Infomation

pep chromosome:12X:18:10828053:10830740:-1 gene:VIT_18s0001g12660 transcript:VIT_18s0001g12660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H054]
Sequence

MHFKSIVRELRDMRDSIGNSSRRRAEGKHTNRRGRSHIAPEGSPSSSALFQQQSQWANMP
PELLLDIIQRVEAAEASWPARRDVVSCGSVCRSWRDITKEIVKTPEQCGCLTFPISLKQP
GPRESQIQCFIKRERATSTFRLYLGLSPALSGDASKLLLAARKIRRATSTEFVISLLGDD
FSRATNAYVGKLKSNFLGTKFTIYDSQPPHDPAVQSNCQSNGRLHSKQGSTRSPSGNYNV
ATISYELNVLRTRGPRRMHCTMHWIPISAIQEGGTAPTPMTFAKCQKDQFPQSADPKGKN
PLIEFSSNSLAETPESIQDTRNPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVA
AVEPCQNVSVAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE

Transcript Sequence

Transcript ID

VIT_18s0001g12660.t01
Transcript Infomation

cdna chromosome:12X:18:10828053:10830740:-1 gene:VIT_18s0001g12660 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H054]
Sequence

TGGTGGTGGTGGTGGTGAGGGTCAAGGTTAAGAGGAGGTGGTGGTGGTGGCGGTGGTCCT
CGTAGAGAGGGATGCAAAAGTAGACCTAGTGTTTCGGAATAACAAAGACTGAGGAGGTGG
TCGGCATTTTGTAGTTTGGCCGTGCTTCTTCCACATCTCAGCCTTTTGTTTTTTCCGAGA
CATTGGCACATTGCACCCCTCATCCTCTAATAGTTCTGTGCTTTTCCCATTCCGATCTGA
AGCGTCCGGGGCAATTTCCATTCTTGTTCTTCATACACGTTCTTGTCCGTCGGATCTGGA
ATTTTGATTTCCTCCTACCGATTTGAGTCACGTAGCATTTTTGGTGAGAGTTGAGGAAAA
AACTTGATCGAGCGTCTCAACTTGCGGTCAATTTTGGGGTTTTGATTGAATTTGAAACGA
TAAGTTCTCGTCTTCAGCTGTAAAGTTTTGAGGTAGAGAAACGACAAGTTCTGTAACAAT
GCATTTTAAAAGCATTGTTCGCGAGCTTAGGGACATGAGAGATAGTATAGGAAACTCGTC
GAGAAGGAGAGCAGAGGGGAAGCACACGAACCGTCGTGGAAGATCGCATATAGCCCCTGA
AGGGTCTCCATCTTCATCTGCACTCTTTCAACAACAAAGTCAGTGGGCTAACATGCCTCC
CGAATTGCTTCTTGATATAATCCAGAGGGTGGAAGCCGCCGAGGCTTCATGGCCTGCCCG
TCGGGATGTTGTTTCTTGTGGATCAGTTTGTAGGTCATGGCGGGATATCACCAAAGAGAT
AGTCAAGACTCCCGAGCAATGTGGTTGCCTCACGTTCCCTATTTCATTGAAGCAGCCTGG
GCCAAGGGAATCCCAAATTCAATGCTTTATCAAGAGAGAAAGGGCGACTTCAACTTTCCG
ATTGTATCTTGGTCTGAGCCCTGCCCTATCGGGGGATGCCAGTAAATTATTATTGGCTGC
CAGAAAGATCAGAAGGGCGACGAGCACGGAGTTTGTGATATCCTTGCTTGGGGACGATTT
CTCTCGAGCAACCAATGCATATGTTGGAAAATTAAAGTCTAATTTTCTGGGTACTAAATT
CACCATCTACGACAGTCAGCCGCCACATGACCCTGCAGTCCAGTCGAATTGTCAGTCAAA
CGGAAGATTACATTCAAAGCAGGGGTCTACCAGGTCACCCAGTGGTAACTATAATGTGGC
CACCATATCTTATGAGCTCAACGTTCTGCGTACCAGAGGCCCTAGGAGAATGCACTGCAC
CATGCATTGGATCCCCATCTCTGCAATTCAGGAAGGTGGCACCGCCCCAACTCCAATGAC
ATTTGCAAAATGCCAAAAGGATCAATTTCCTCAGTCAGCGGATCCAAAAGGAAAGAACCC
ACTCATTGAGTTTAGCTCCAACAGTCTTGCTGAGACACCAGAATCCATCCAAGACACGAG
AAATCCACTGGTTTTGAAAAATAAAGCTCCTAGATGGCATGAGCAGCTGCAATGCTGGTG
CCTGAATTTCAAAGGACGTGTTACAGTGGCCTCCGTAAAAAATTTCCAGCTGGTGGCAGC
TGTGGAGCCTTGCCAAAATGTCTCTGTGGCAGAGCAAGAAAAAGTAATACTACAGTTTGG
AAAGATTGGGAAAGACATATTCACCATGGATTATCGATACCCCCTCTCTGCCTTCCAAGC
ATTTGCAATCTGCTTGAGCAGCTTTGACACTAAACCAGCCTGTGAATGATCACATTGTAT
TATCATTAT