Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g12620.t01
CDS Infomation	cds chromosome:12X:18:10804023:10809001:1 gene:VIT_18s0001g12620 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H051]
Sequence	ATGCAGGCACTGTGCTCATTACACCATGCGATGGATAAAGCCAAGCTTCTTATCCAGAAC TGCACTGAGTCTAGTAAATTATACTTGGCAATTACAGCAGATAAAATAGTTTTGAGATGT GAAAGAATATGCAACTGTTTGGAGTCGAGTTTAAGACAACTTCAAAATAATGTTCCAACA TTGTTGGCTGCAAAGATATCTGGTATTGTTGAAGACCTTAAGGGTGCAAAATTTACTGTG GAATCTGCTGATGATGAGGCTGGAAGGGTTGTTCTAGCATTGGTTCGGCAGGGCATGCCT GACTCTGAATCTATAAATATTTCTGAACTTGAAGCTATTCAAATCGCTGCTTCAAGGCTG AATATTGCATCCCATATGGCACTCTTGATTGAGAAAAGGTCTATAAAGAGGCTAATCGAC AAAGTTCCTGACACAAACCTAACAAAGATGAAAATCTTGAAGTACCTCCTATATCTTCTG AGGAAGTATGGAGATTCAATAAGGAGCCGCAATACTGAGAGCACTACTATGTATCAGTCC ATTGAGCAAGAACCACATGAAGAAAGTGCAATATATGAAACTCTAGCTGATGACTTCAGT GTAACCAAACCTCCTGAGGAATTCAAATGTCCCATCTCTATGAGACTGATGTATGATCCT GTTGTTATAGCTTCTGGGCAAACATATGAAAGATTCTGGATAACTAAGTGGTTCAATGAT GGGAATGATACATGTCCAAAGACACATGAAAAGTTGTCTCAGTTTTTCCTCACTCCAAAC TCCACAATGAAGAACCTCATTTCGAGGTGGTGCTTGAAGCATGGGATCAGTATTTCTGAT CCATGTTCACAACAAGCTCCTGAATCCCTTCCTTTGCAGAAACTTTCACCATCCACTTCC ATTGCTAGCTTTGCCAGTTCTCTGAATGGTCTGTGCCTGCAAACCAGCAGTGTGTCATTA CACTCTACAGACACCAATTTTCCTTCAAATAAATTGGACATAAGGATGGATATCCTGCAA ACCAGCAGTGTGTCATTACACTCTACAGACACCAATTTTCCTTCAAATAAATTGGACATA AGGATGGATAATGGCTCTGCACACGAGCTTCCTCAGATGAATGCTGATTCTCAGGGATGC CAATCTTCTGCAAATAGGCATGGCATGAATTTTGCCTTTCTCTCCAAACTTGCTGCACTT CCATGGGAATCCCAGTGCAAGGAGATTGGAAACGTAAGAGATCAACTGAAAGACAGTATT CAAGCATGTCATTCTACATTTTCCTCTAGTTACATCAAACCGCTGATTAGATTTTTGAAG GATGCATGTGAAAATGGCAATTTACAAGCACAGCGAGATGGAGCTCTAGTTCTTTTGTAT TTTCTAAATAAGCGCAGAAGTGAAATGCCACCCTTACATGAAGATGCAATTTATGTTTTA GCATCATTTCTGGACTCAGAAATCACTGAAGAAGCGCTTGCAATCATGGAAGTGTTGTCT TGCCAACGTCATTATAAGTCAGAAATTGTGGCATCTGGTGTTCTTCCTTCCATCATAAAA TTCCTTGACACCAAAATGAAGAAATTCCATGTGCTTGCTCTGAAAATACTCTGCAATTTG TCCTCAAACCATGATATGGGATACCACATTGTCTATTTGGATTGCATCCCAAAGCTGGCT CCATTCTTTGTTGATCACAAACTTGCAGGATATTGCATTAAAATTTTCAGAAACTTGTGT GATATTGAGGAGGCTAGGATTACAGTGGCTGAGACCAATCAATGCATCGATTTCATTGCT AAAATACTAGAAAATGGCAGTGAGGAGGAGCAAGAAGATGCCTTGGAAGTTCTTCTTTCT CTATGTCATTACAGGGAGTATGGTCAGCTTTTCAGGGAAGATCACATTGTTCAATCATTG TTCCATATCTCTCTCAATGGGAATGCCAGAGGACAGGAGATTGCTAAGGAATTACTCCAG CTTTTGAGAAATATTAAAAATGACCCCGTTCTAGAATGTTCAAGTTCTAGTTCTACCTCC GATGAAGTCATACAAGATTTTGTTATCAACTCCAAAGGAAAGAAACTGCCGTTGAAGGCA TCTAGAATTCTGGGAAAGAAAATATTAAGATTCAGAAAACCAAGAAGCTAG

Peptide Sequence

PEP ID	VIT_18s0001g12620.t01
PEP Infomation	pep chromosome:12X:18:10804023:10809001:1 gene:VIT_18s0001g12620 transcript:VIT_18s0001g12620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H051]
Sequence	MQALCSLHHAMDKAKLLIQNCTESSKLYLAITADKIVLRCERICNCLESSLRQLQNNVPT LLAAKISGIVEDLKGAKFTVESADDEAGRVVLALVRQGMPDSESINISELEAIQIAASRL NIASHMALLIEKRSIKRLIDKVPDTNLTKMKILKYLLYLLRKYGDSIRSRNTESTTMYQS IEQEPHEESAIYETLADDFSVTKPPEEFKCPISMRLMYDPVVIASGQTYERFWITKWFND GNDTCPKTHEKLSQFFLTPNSTMKNLISRWCLKHGISISDPCSQQAPESLPLQKLSPSTS IASFASSLNGLCLQTSSVSLHSTDTNFPSNKLDIRMDILQTSSVSLHSTDTNFPSNKLDI RMDNGSAHELPQMNADSQGCQSSANRHGMNFAFLSKLAALPWESQCKEIGNVRDQLKDSI QACHSTFSSSYIKPLIRFLKDACENGNLQAQRDGALVLLYFLNKRRSEMPPLHEDAIYVL ASFLDSEITEEALAIMEVLSCQRHYKSEIVASGVLPSIIKFLDTKMKKFHVLALKILCNL SSNHDMGYHIVYLDCIPKLAPFFVDHKLAGYCIKIFRNLCDIEEARITVAETNQCIDFIA KILENGSEEEQEDALEVLLSLCHYREYGQLFREDHIVQSLFHISLNGNARGQEIAKELLQ LLRNIKNDPVLECSSSSSTSDEVIQDFVINSKGKKLPLKASRILGKKILRFRKPRS

Transcript Sequence

Transcript ID	VIT_18s0001g12620.t01
Transcript Infomation	cdna chromosome:12X:18:10804023:10809001:1 gene:VIT_18s0001g12620 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H051]
Sequence	ATGCAGGCACTGTGCTCATTACACCATGCGATGGATAAAGCCAAGCTTCTTATCCAGAAC TGCACTGAGTCTAGTAAATTATACTTGGCAATTACAGCAGATAAAATAGTTTTGAGATGT GAAAGAATATGCAACTGTTTGGAGTCGAGTTTAAGACAACTTCAAAATAATGTTCCAACA TTGTTGGCTGCAAAGATATCTGGTATTGTTGAAGACCTTAAGGGTGCAAAATTTACTGTG GAATCTGCTGATGATGAGGCTGGAAGGGTTGTTCTAGCATTGGTTCGGCAGGGCATGCCT GACTCTGAATCTATAAATATTTCTGAACTTGAAGCTATTCAAATCGCTGCTTCAAGGCTG AATATTGCATCCCATATGGCACTCTTGATTGAGAAAAGGTCTATAAAGAGGCTAATCGAC AAAGTTCCTGACACAAACCTAACAAAGATGAAAATCTTGAAGTACCTCCTATATCTTCTG AGGAAGTATGGAGATTCAATAAGGAGCCGCAATACTGAGAGCACTACTATGTATCAGTCC ATTGAGCAAGAACCACATGAAGAAAGTGCAATATATGAAACTCTAGCTGATGACTTCAGT GTAACCAAACCTCCTGAGGAATTCAAATGTCCCATCTCTATGAGACTGATGTATGATCCT GTTGTTATAGCTTCTGGGCAAACATATGAAAGATTCTGGATAACTAAGTGGTTCAATGAT GGGAATGATACATGTCCAAAGACACATGAAAAGTTGTCTCAGTTTTTCCTCACTCCAAAC TCCACAATGAAGAACCTCATTTCGAGGTGGTGCTTGAAGCATGGGATCAGTATTTCTGAT CCATGTTCACAACAAGCTCCTGAATCCCTTCCTTTGCAGAAACTTTCACCATCCACTTCC ATTGCTAGCTTTGCCAGTTCTCTGAATGGTCTGTGCCTGCAAACCAGCAGTGTGTCATTA CACTCTACAGACACCAATTTTCCTTCAAATAAATTGGACATAAGGATGGATATCCTGCAA ACCAGCAGTGTGTCATTACACTCTACAGACACCAATTTTCCTTCAAATAAATTGGACATA AGGATGGATAATGGCTCTGCACACGAGCTTCCTCAGATGAATGCTGATTCTCAGGGATGC CAATCTTCTGCAAATAGGCATGGCATGAATTTTGCCTTTCTCTCCAAACTTGCTGCACTT CCATGGGAATCCCAGTGCAAGGAGATTGGAAACGTAAGAGATCAACTGAAAGACAGTATT CAAGCATGTCATTCTACATTTTCCTCTAGTTACATCAAACCGCTGATTAGATTTTTGAAG GATGCATGTGAAAATGGCAATTTACAAGCACAGCGAGATGGAGCTCTAGTTCTTTTGTAT TTTCTAAATAAGCGCAGAAGTGAAATGCCACCCTTACATGAAGATGCAATTTATGTTTTA GCATCATTTCTGGACTCAGAAATCACTGAAGAAGCGCTTGCAATCATGGAAGTGTTGTCT TGCCAACGTCATTATAAGTCAGAAATTGTGGCATCTGGTGTTCTTCCTTCCATCATAAAA TTCCTTGACACCAAAATGAAGAAATTCCATGTGCTTGCTCTGAAAATACTCTGCAATTTG TCCTCAAACCATGATATGGGATACCACATTGTCTATTTGGATTGCATCCCAAAGCTGGCT CCATTCTTTGTTGATCACAAACTTGCAGGATATTGCATTAAAATTTTCAGAAACTTGTGT GATATTGAGGAGGCTAGGATTACAGTGGCTGAGACCAATCAATGCATCGATTTCATTGCT AAAATACTAGAAAATGGCAGTGAGGAGGAGCAAGAAGATGCCTTGGAAGTTCTTCTTTCT CTATGTCATTACAGGGAGTATGGTCAGCTTTTCAGGGAAGATCACATTGTTCAATCATTG TTCCATATCTCTCTCAATGGGAATGCCAGAGGACAGGAGATTGCTAAGGAATTACTCCAG CTTTTGAGAAATATTAAAAATGACCCCGTTCTAGAATGTTCAAGTTCTAGTTCTACCTCC GATGAAGTCATACAAGATTTTGTTATCAACTCCAAAGGAAAGAAACTGCCGTTGAAGGCA TCTAGAATTCTGGGAAAGAAAATATTAAGATTCAGAAAACCAAGAAGCTAGTGTTGCTTT GACCCTTTGGTGACTTCAAAACTGTCTCA