Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12580.t01
CDS Infomation

cds chromosome:12X:18:10783056:10784230:1 gene:VIT_18s0001g12580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACTGAGCAAGGAAATGGGATTTCCACCCTCCTCAGGCTATAACCCTCTGGCATCC
GCGGGATCTGGAGGAGGAGGAGATGATCATCATAATATTGATAATGGCACTACCGTCTTC
AAACCACCTCAAATCCCACACCATCATCCTCTTCTTCAACAACAACAAGAGCTGAATCCG
CAACAGCAGTCACTCGGCCAGGGATGTGATCCAGATCCAGACCCAGACCCAGACCCAGTT
CACGTCGCCGGCGTCCTTGCTGGTGCAACAATTGCGTCCACTATCGGCGGATCGAACTCC
AAGGCCTCCGTTAGGTATAGAGAATGCCTCAAGAACCACGCAGCCAACATCGGCGGCAAC
GTCGTCGACGGCTGCGGGGAGTTCATGCCCGATGGAGAAGAAGGAACCCTAGAAGCTCTG
ATGTGTGCAGCTTGTAACTGCCACCGGAACTTCCACCGGAAAGAGGTCGACGGCGAGACC
ATCGGCAGGAGTGCACCTCACTTTCACCCACTCCCTCCAACTCTAGCATCTCCGCCATAT
CTGCACCGCCAAAAATTCCCAAAGGCCTTTCACGCACCCCCTTCAACAATCATCATCCCT
CCCATGTCCATGGCTTTTGGGACGAGCATCGGCGCCACCGAGTCTTCAAGCGAGGATCTC
AGAGCCTTCGACTCCAATGCCGGGGCAGCGCCACCTCCTCCTCCCCCTCCCCCTCCCTCG
TCTCTGTCGAAGAAGCGGTTTAGGACGAAATTCACTCAGGAGCAGAAAGAGAAGATGCTG
GAGTACGCAGAGAAGGTGGGGTGGAGAATGCAAAAGCAGTACGAAGAACAAGTTCAACAG
CTTTGTGCCGAGGTTGGTGTAAAGAGACAGGTCTTCAAGGTTTGGATGCACAACAACAAG
AACACCCTAAAGAAACAGCCACAGCCGCAGCAGCAACCCCCGCCATTGTAA

Peptide Sequence

PEP ID

VIT_18s0001g12580.t01
PEP Infomation

pep chromosome:12X:18:10783056:10784230:1 gene:VIT_18s0001g12580 transcript:VIT_18s0001g12580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELSKEMGFPPSSGYNPLASAGSGGGGDDHHNIDNGTTVFKPPQIPHHHPLLQQQQELNP
QQQSLGQGCDPDPDPDPDPVHVAGVLAGATIASTIGGSNSKASVRYRECLKNHAANIGGN
VVDGCGEFMPDGEEGTLEALMCAACNCHRNFHRKEVDGETIGRSAPHFHPLPPTLASPPY
LHRQKFPKAFHAPPSTIIIPPMSMAFGTSIGATESSSEDLRAFDSNAGAAPPPPPPPPPS
SLSKKRFRTKFTQEQKEKMLEYAEKVGWRMQKQYEEQVQQLCAEVGVKRQVFKVWMHNNK
NTLKKQPQPQQQPPPL

Transcript Sequence

Transcript ID

VIT_18s0001g12580.t01
Transcript Infomation

cdna chromosome:12X:18:10783056:10784230:1 gene:VIT_18s0001g12580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGATAGTATTATTTGAGATGTTCCATGAATGATATTCTCATATAGAATTTTGAGAGATC
AAAAGCCAGGGTTTCAATTTTATCAAGGTTAATGGAACTGAGCAAGGAAATGGGATTTCC
ACCCTCCTCAGGCTATAACCCTCTGGCATCCGCGGGATCTGGAGGAGGAGGAGATGATCA
TCATAATATTGATAATGGCACTACCGTCTTCAAACCACCTCAAATCCCACACCATCATCC
TCTTCTTCAACAACAACAAGAGCTGAATCCGCAACAGCAGTCACTCGGCCAGGGATGTGA
TCCAGATCCAGACCCAGACCCAGACCCAGTTCACGTCGCCGGCGTCCTTGCTGGTGCAAC
AATTGCGTCCACTATCGGCGGATCGAACTCCAAGGCCTCCGTTAGGTATAGAGAATGCCT
CAAGAACCACGCAGCCAACATCGGCGGCAACGTCGTCGACGGCTGCGGGGAGTTCATGCC
CGATGGAGAAGAAGGAACCCTAGAAGCTCTGATGTGTGCAGCTTGTAACTGCCACCGGAA
CTTCCACCGGAAAGAGGTCGACGGCGAGACCATCGGCAGGAGTGCACCTCACTTTCACCC
ACTCCCTCCAACTCTAGCATCTCCGCCATATCTGCACCGCCAAAAATTCCCAAAGGCCTT
TCACGCACCCCCTTCAACAATCATCATCCCTCCCATGTCCATGGCTTTTGGGACGAGCAT
CGGCGCCACCGAGTCTTCAAGCGAGGATCTCAGAGCCTTCGACTCCAATGCCGGGGCAGC
GCCACCTCCTCCTCCCCCTCCCCCTCCCTCGTCTCTGTCGAAGAAGCGGTTTAGGACGAA
ATTCACTCAGGAGCAGAAAGAGAAGATGCTGGAGTACGCAGAGAAGGTGGGGTGGAGAAT
GCAAAAGCAGTACGAAGAACAAGTTCAACAGCTTTGTGCCGAGGTTGGTGTAAAGAGACA
GGTCTTCAAGGTTTGGATGCACAACAACAAGAACACCCTAAAGAAACAGCCACAGCCGCA
GCAGCAACCCCCGCCATTGTAACCAGCAATTAAATTGTACACTGTAGATGGGTATCAGAA
CGAGAAGAGAATGTATAAAGAGAAATGAGGATCATTTGCAAATCCCTTGGCATCTACATA
AATCCCAGCTCTCATGCACCTTCAATTCACACAAA