Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12540.t01
CDS Infomation

cds chromosome:12X:18:10724350:10746129:1 gene:VIT_18s0001g12540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCCAATGCTTCTTCGTTCAAGATAATATTAGGATCAGCCTCAGTTGCGCGCAGA
AAAATACTAGCTGAGATGGGATATGAATTCACAGTTATGACTGCAGACATAGATGAAAAA
GGCATCCGAAAAGAAAAGCCTGAGGAGTTGGTAATGGCTATTGCAGAGGCAAAGGCAGAT
GCCATCATATCAAAGCTTCAAACCATCGATAATCGGGAGAAGGATACCAAACCAACAATT
TTGGTTGCTGCTGACACAGCAGAAGCCATCTTACCGAAGCTCCCTGTTGGTCATTACAAA
ATGGATGCTGAGCCAACACTTTTAATTACATCTGACCAAGTGGTGGTCTATGAAGGTATG
GTCAGGGAAAAACCATCCAGCAAGGAAGAAGCCCGCCAATTCATCAAAGATTACTCTGGT
GGACACGCTGCAACAGTGGGATCTGTTATCATTACAAACCTTAAGACAGGATTCAGAAAA
GGAGGGTGGGATAAAGTGGAGATTTATTTCCATGAGATTCCAGATGAGATGATTAACAAA
CTGATAGAGGAGGGTACTGTGCTGTACGTTGCTGGTGGACTAATAATAGAACACCCTTTG
ATACTACCCTTCATTAAGGAAGTGGTGGGAACAACTGACAGTGTCATGGGACTTCCCAAA
GCGCTCACGGAAAGACTCATAAAGGAGGCCCTCTAG

Peptide Sequence

PEP ID

VIT_18s0001g12540.t01
PEP Infomation

pep chromosome:12X:18:10724350:10746129:1 gene:VIT_18s0001g12540 transcript:VIT_18s0001g12540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDANASSFKIILGSASVARRKILAEMGYEFTVMTADIDEKGIRKEKPEELVMAIAEAKAD
AIISKLQTIDNREKDTKPTILVAADTAEAILPKLPVGHYKMDAEPTLLITSDQVVVYEGM
VREKPSSKEEARQFIKDYSGGHAATVGSVIITNLKTGFRKGGWDKVEIYFHEIPDEMINK
LIEEGTVLYVAGGLIIEHPLILPFIKEVVGTTDSVMGLPKALTERLIKEAL

Transcript Sequence

Transcript ID

VIT_18s0001g12540.t01
Transcript Infomation

cdna chromosome:12X:18:10724350:10746129:1 gene:VIT_18s0001g12540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGTATTGCTTTTGGCTATTGCAATTCTTTTGTTGTTGGGCGGTGGAGAAAGATGGATGC
CAATGCTTCTTCGTTCAAGATAATATTAGGATCAGCCTCAGTTGCGCGCAGAAAAATACT
AGCTGAGATGGGATATGAATTCACAGTTATGACTGCAGACATAGATGAAAAAGGCATCCG
AAAAGAAAAGCCTGAGGAGTTGGTAATGGCTATTGCAGAGGCAAAGGCAGATGCCATCAT
ATCAAAGCTTCAAACCATCGATAATCGGGAGAAGGATACCAAACCAACAATTTTGGTTGC
TGCTGACACAGCAGAAGCCATCTTACCGAAGCTCCCTGTTGGTCATTACAAAATGGATGC
TGAGCCAACACTTTTAATTACATCTGACCAAGTGGTGGTCTATGAAGGTATGGTCAGGGA
AAAACCATCCAGCAAGGAAGAAGCCCGCCAATTCATCAAAGATTACTCTGGTGGACACGC
TGCAACAGTGGGATCTGTTATCATTACAAACCTTAAGACAGGATTCAGAAAAGGAGGGTG
GGATAAAGTGGAGATTTATTTCCATGAGATTCCAGATGAGATGATTAACAAACTGATAGA
GGAGGGTACTGTGCTGTACGTTGCTGGTGGACTAATAATAGAACACCCTTTGATACTACC
CTTCATTAAGGAAGTGGTGGGAACAACTGACAGTGTCATGGGACTTCCCAAAGCGCTCAC
GGAAAGACTCATAAAGGAGGCCCTCTAGCTGCCTTAGCTGGTGTCGTCTGAAAGATATGT
ACCTGATCAGGACACATTGTTTTCCTCATGTTATTTTAATCTGTCAGATCATGCATCTTC
ATACTCTATTATTATTATTAGTAGTACTAGTAGTAGAAGAGACTACGAAATAGGATATTT
CAACCTCCATTG