Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12510.t01
CDS Infomation

cds chromosome:12X:18:10686816:10697439:1 gene:VIT_18s0001g12510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCCTCCAGCTGCTTCCACCACTTGTCATCGCACATTGACAACTACTGCTACTCCT
CCTCTCCCAGAATCCGATTCGTTCTTTCACCCACCACCACTCCCCATATGTCTATTTAAA
TCCACCATGCGAATTCCCAAGAAACCCGTTTCCTTTTGCCTCTCTTTCTTTTCTTCTCAG
CTTTCCCACCCTTTCTGCCCCCGGATTACATTTCTCACACCTTCTTCTCTCCTTTTTTCC
CCAAAAGGAAAGGCTACTACTCCCGGAGGTTCCAGTCAGCTTCACACCAATTGCACAATG
GGAGGGAACCACAAGAGTGTGGATGATGTAACGTTGCAGTTTCAACATACAGTTTGCAGT
AATGATGGGCAAGGCCCCTTTATTTGGTCTTCTCCGGAAGGGGGTTGTCAAATTGATATA
GGGAAAAAAATCTTCTGCAACAGATCTTTAAATATGAAGAATATTGTTGCTGTTGGGTTT
GATATGGATTACACTTTGGCTCAATATATGCCTGAAACTTTTGAATCCCTTGCTTATGAA
GGCACAATCAGAAAGCTAGTGTATGATTTGGGATACCCTCGTGAGTTGCTGGAATGGACC
TTTGATTGGAAGTACATGGTCAGAGGCTTGGTTCTTGATAAAAAGAGAGGCAACATTTTG
AAGATGGATAGACACAAATATGTTAAGGTAGCCTATCATGGATTTAGAGAGATGTCAAAG
GAAGATAAAGTTGGGACGTACGGAAATACTTTGATACGAGATTCTTTTGATGAGCCTGAC
TATGCACTTATTGACACCCTTTTTTCGCTAGCAGAAGCGTACTTGTTTGCCCAACTCGTT
GACTTCAGGGATAAGTATCCTTCAAAAGTTCCAGATGGTGCCGACTACTCTCGTATGTAT
AAGGATGTTCGAGCTGCAGTTGACTTGTGCCATCGTGATGGGACTTTGAAGAAAATGGTT
GCAAAAGATCCTAAAAAGTATATTAATGATGATACCTCAATAGTGCCCATGATGAAGATG
CTTAGAGATTCTGGCCGTTCAACATTCTTAGTGACAAATAGTTTATGGGACTATACAAAT
ATCGTGATGAATTTCCTTTGTGGCCCCCGGATGTTGGATGGTAGCGCCTCTTCCAATTTT
GACTGGCTTCAGTACTTTGATGTTGTCATTACTGGCAGTGCAAAACCAAGTTTTTTCCAT
GATGACAATCGCGCCAATCTTTTTGAGGTTGAACCTGAGTCGGGAATGCTACTTAACACT
GATAATGGCACTCCTATGCCACAGGTGGGAAACACATCACCAAGATTCCCATTGAAGGGG
CTGAAAAAGACATGTAGAGTCTTCCAGGGAGGCAGTGTTGGTCATTTGCACAAACTACTT
TCAATTGAGTCAAGTTCACAGGTTCTTTATGTTGGGGATCATATCTATGGGGATATATTG
CGCAGCAAAAAAGTTCTGGGCTGGAGAACAATGCTGGTTGTTCCGGAGCTCGAGAGAGAG
GTTGAACTCCTCTGGGAATTGAGGGATACCAGAAAGCAACTTCGATTGTTAAGGAATGAG
CGAGATCTCATTGAAGACAAAATACATCATTTGAAGTGGTCTCTCAAGTTTGATGGTGTC
CATCTTGATGAGAAGCCAATGTTAGCTACTGAACTAAGCAAATTGGAGTCTCAGAGGGAG
AAAGTTCGCCTCTGTCATCAACAGGCTCAACGGGAATGTCATCAAAAGTTTCACAAGGTC
TGGGGACAACTCATGAAGACTGGCTATCAGAACTCTCGCTTTGCACATCAGGTGGAGAGA
TTTGCGTGTCTCTACACTAGCCAAGTGACCAACCTCAGCCTCTACTCTCCAGACAAATAC
TACAGACCCAGTGAGGATTTCATGCCCCATGAATTTGATATCCTCTCCATCTGA

Peptide Sequence

PEP ID

VIT_18s0001g12510.t01
PEP Infomation

pep chromosome:12X:18:10686816:10697439:1 gene:VIT_18s0001g12510 transcript:VIT_18s0001g12510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPPAASTTCHRTLTTTATPPLPESDSFFHPPPLPICLFKSTMRIPKKPVSFCLSFFSSQ
LSHPFCPRITFLTPSSLLFSPKGKATTPGGSSQLHTNCTMGGNHKSVDDVTLQFQHTVCS
NDGQGPFIWSSPEGGCQIDIGKKIFCNRSLNMKNIVAVGFDMDYTLAQYMPETFESLAYE
GTIRKLVYDLGYPRELLEWTFDWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFREMSK
EDKVGTYGNTLIRDSFDEPDYALIDTLFSLAEAYLFAQLVDFRDKYPSKVPDGADYSRMY
KDVRAAVDLCHRDGTLKKMVAKDPKKYINDDTSIVPMMKMLRDSGRSTFLVTNSLWDYTN
IVMNFLCGPRMLDGSASSNFDWLQYFDVVITGSAKPSFFHDDNRANLFEVEPESGMLLNT
DNGTPMPQVGNTSPRFPLKGLKKTCRVFQGGSVGHLHKLLSIESSSQVLYVGDHIYGDIL
RSKKVLGWRTMLVVPELEREVELLWELRDTRKQLRLLRNERDLIEDKIHHLKWSLKFDGV
HLDEKPMLATELSKLESQREKVRLCHQQAQRECHQKFHKVWGQLMKTGYQNSRFAHQVER
FACLYTSQVTNLSLYSPDKYYRPSEDFMPHEFDILSI

Transcript Sequence

Transcript ID

VIT_18s0001g12510.t01
Transcript Infomation

cdna chromosome:12X:18:10686816:10697439:1 gene:VIT_18s0001g12510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAGCGGCACCACCGGCAAAAGTTATCCATGAAGAGAGTCGTAGTCAGATTCAGATGTG
AGGGAAACGCAACACACGTGGCGGCAGAACGTCTGAGCCTTAAAAAACTACCACCCACAT
CCACCACCACTCTCCACCTCCCAACCTTCAACATTCCTCTTTCCCTAAACCCCAATTTTT
TGCTGGAATCGGTGGGCACCAGGAATAAGTTTCTATTCCCGAAATGGATAATCCAACCCG
GAATAGGAATAATCTCGGGCGCCATTCCATGCCCAAGAACGTAATAAAGCAATAGATGTC
TCCTCCAGCTGCTTCCACCACTTGTCATCGCACATTGACAACTACTGCTACTCCTCCTCT
CCCAGAATCCGATTCGTTCTTTCACCCACCACCACTCCCCATATGTCTATTTAAATCCAC
CATGCGAATTCCCAAGAAACCCGTTTCCTTTTGCCTCTCTTTCTTTTCTTCTCAGCTTTC
CCACCCTTTCTGCCCCCGGATTACATTTCTCACACCTTCTTCTCTCCTTTTTTCCCCAAA
AGGAAAGGCTACTACTCCCGGAGGTTCCAGTCAGCTTCACACCAATTGCACAATGGGAGG
GAACCACAAGAGTGTGGATGATGTAACGTTGCAGTTTCAACATACAGTTTGCAGTAATGA
TGGGCAAGGCCCCTTTATTTGGTCTTCTCCGGAAGGGGGTTGTCAAATTGATATAGGGAA
AAAAATCTTCTGCAACAGATCTTTAAATATGAAGAATATTGTTGCTGTTGGGTTTGATAT
GGATTACACTTTGGCTCAATATATGCCTGAAACTTTTGAATCCCTTGCTTATGAAGGCAC
AATCAGAAAGCTAGTGTATGATTTGGGATACCCTCGTGAGTTGCTGGAATGGACCTTTGA
TTGGAAGTACATGGTCAGAGGCTTGGTTCTTGATAAAAAGAGAGGCAACATTTTGAAGAT
GGATAGACACAAATATGTTAAGGTAGCCTATCATGGATTTAGAGAGATGTCAAAGGAAGA
TAAAGTTGGGACGTACGGAAATACTTTGATACGAGATTCTTTTGATGAGCCTGACTATGC
ACTTATTGACACCCTTTTTTCGCTAGCAGAAGCGTACTTGTTTGCCCAACTCGTTGACTT
CAGGGATAAGTATCCTTCAAAAGTTCCAGATGGTGCCGACTACTCTCGTATGTATAAGGA
TGTTCGAGCTGCAGTTGACTTGTGCCATCGTGATGGGACTTTGAAGAAAATGGTTGCAAA
AGATCCTAAAAAGTATATTAATGATGATACCTCAATAGTGCCCATGATGAAGATGCTTAG
AGATTCTGGCCGTTCAACATTCTTAGTGACAAATAGTTTATGGGACTATACAAATATCGT
GATGAATTTCCTTTGTGGCCCCCGGATGTTGGATGGTAGCGCCTCTTCCAATTTTGACTG
GCTTCAGTACTTTGATGTTGTCATTACTGGCAGTGCAAAACCAAGTTTTTTCCATGATGA
CAATCGCGCCAATCTTTTTGAGGTTGAACCTGAGTCGGGAATGCTACTTAACACTGATAA
TGGCACTCCTATGCCACAGGTGGGAAACACATCACCAAGATTCCCATTGAAGGGGCTGAA
AAAGACATGTAGAGTCTTCCAGGGAGGCAGTGTTGGTCATTTGCACAAACTACTTTCAAT
TGAGTCAAGTTCACAGGTTCTTTATGTTGGGGATCATATCTATGGGGATATATTGCGCAG
CAAAAAAGTTCTGGGCTGGAGAACAATGCTGGTTGTTCCGGAGCTCGAGAGAGAGGTTGA
ACTCCTCTGGGAATTGAGGGATACCAGAAAGCAACTTCGATTGTTAAGGAATGAGCGAGA
TCTCATTGAAGACAAAATACATCATTTGAAGTGGTCTCTCAAGTTTGATGGTGTCCATCT
TGATGAGAAGCCAATGTTAGCTACTGAACTAAGCAAATTGGAGTCTCAGAGGGAGAAAGT
TCGCCTCTGTCATCAACAGGCTCAACGGGAATGTCATCAAAAGTTTCACAAGGTCTGGGG
ACAACTCATGAAGACTGGCTATCAGAACTCTCGCTTTGCACATCAGGTGGAGAGATTTGC
GTGTCTCTACACTAGCCAAGTGACCAACCTCAGCCTCTACTCTCCAGACAAATACTACAG
ACCCAGTGAGGATTTCATGCCCCATGAATTTGATATCCTCTCCATCTGAAGCTCTTTTGC
TCTGACAATGGGAGGCCCTCGACATCTTCAGGAAAGAGCCATTCATTTTTGGCTTTTCTT
AGCATGGACACAGCTTTTAGCATTTTACCCAACATCTTTTCCTTGTTTCCCCTTTTTCTT
AATAGAAATTATTCCTAATTTGCTCAAAATGTATTGTGATGCAATGGAAGCTCACCGCAG
CACATTGTACCAAGATATTGGGTGCTGCATTTAATTAAATATTGAGCTAATTAGTTTTAG
CATTCAAGAAAATCTCTCGTTTGTGCTCAGTGGTGTAGTCCTTCACAGGCCTATTGTAAT
TCTCTATTTCTATCGGGCATAGGCTATATACACCAGT