Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12500.t01
CDS Infomation

cds chromosome:12X:18:10682095:10684613:-1 gene:VIT_18s0001g12500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGTTACCGGATTTCACCTTGTCGCATTTTCCTCCTCTCCCAATGCTTTATTCCCC
CCACAGTCTCCAATTTCATCGAAAGATGATCATCATCAGCAGAAACAAGAGCAGAAACAG
CTTCAGAGCTCTCTGTTTGGATTCAAAACCTATCGCAGAGACGCAGCTTTGCTCTCGTTC
CTTGCTCTCATTCCTGGTCTACATCGTTCATCCCCTGCAACTGCATTGACATTTGGCATC
TCTGGACCGAAGGATTGGCTGAAAGGGCAAAAGAGGAAGGCTTCCAAGTTTCTCTTGGCA
CCTGTTGACGCCTCTCGTGAAAGCCTGCGCACTGCCTATCTCTTATTCACGGCGAGTGGT
TCTAATGATCCGAACAAGGATTTGGAAGAAGTTCAGAGGCTGCTTAAATCTGCTGCTAGG
GATTGTGTTCCGCAAGAGAGGAATTCTTTCGTTGCATTTCAAGCTACTACAGGAGTGGAG
GTTTGCACTTTCCGGTTAATTTTGAAGAATGCAGCTTCATTACTTGATGATAAGGATCCT
GTAAAGTTGGAAGCTGAAGCTATGCTAAATGATCTTATAAGTTCTTTTACCTCCCTTGAT
GATGTGACCAATGAAACTGATATGGAATTTGCTTCTAAGAGACAAAAGGTGGCAGATGCA
CTCATGGACACCATATCTTCCCTTAATAAATTCGAGCAGGGTATCAAGGACTGCCTTGAA
GTTTGA

Peptide Sequence

PEP ID

VIT_18s0001g12500.t01
PEP Infomation

pep chromosome:12X:18:10682095:10684613:-1 gene:VIT_18s0001g12500 transcript:VIT_18s0001g12500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVTGFHLVAFSSSPNALFPPQSPISSKDDHHQQKQEQKQLQSSLFGFKTYRRDAALLSF
LALIPGLHRSSPATALTFGISGPKDWLKGQKRKASKFLLAPVDASRESLRTAYLLFTASG
SNDPNKDLEEVQRLLKSAARDCVPQERNSFVAFQATTGVEVCTFRLILKNAASLLDDKDP
VKLEAEAMLNDLISSFTSLDDVTNETDMEFASKRQKVADALMDTISSLNKFEQGIKDCLE
V

Transcript Sequence

Transcript ID

VIT_18s0001g12500.t01
Transcript Infomation

cdna chromosome:12X:18:10682095:10684613:-1 gene:VIT_18s0001g12500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACATCAGGAAGTGGATTACGTGGGCCTGCCTCAATACTGAATTGACGGTGGTGATGCTC
CTTTGCGGTTGCGGCTGAAACAGGTGGCGGATGTAGACCAATTGCAGAGGCGCAGATGGT
CATCTCCGCCATGGCAGTTACCGGATTTCACCTTGTCGCATTTTCCTCCTCTCCCAATGC
TTTATTCCCCCCACAGTCTCCAATTTCATCGAAAGATGATCATCATCAGCAGAAACAAGA
GCAGAAACAGCTTCAGAGCTCTCTGTTTGGATTCAAAACCTATCGCAGAGACGCAGCTTT
GCTCTCGTTCCTTGCTCTCATTCCTGGTCTACATCGTTCATCCCCTGCAACTGCATTGAC
ATTTGGCATCTCTGGACCGAAGGATTGGCTGAAAGGGCAAAAGAGGAAGGCTTCCAAGTT
TCTCTTGGCACCTGTTGACGCCTCTCGTGAAAGCCTGCGCACTGCCTATCTCTTATTCAC
GGCGAGTGGTTCTAATGATCCGAACAAGGATTTGGAAGAAGTTCAGAGGCTGCTTAAATC
TGCTGCTAGGGATTGTGTTCCGCAAGAGAGGAATTCTTTCGTTGCATTTCAAGCTACTAC
AGGAGTGGAGGTTTGCACTTTCCGGTTAATTTTGAAGAATGCAGCTTCATTACTTGATGA
TAAGGATCCTGTAAAGTTGGAAGCTGAAGCTATGCTAAATGATCTTATAAGTTCTTTTAC
CTCCCTTGATGATGTGACCAATGAAACTGATATGGAATTTGCTTCTAAGAGACAAAAGGT
GGCAGATGCACTCATGGACACCATATCTTCCCTTAATAAATTCGAGCAGGGTATCAAGGA
CTGCCTTGAAGTTTGATTTGTTATGGCCTTCTTCCAGGACAAAAACATTTGTGGATATTA
TGCTTGAATATTTTTTCACATGCTCTTATCCAAAGGGTTCTTGAAGACAGTGGGAATAGG
TCCTATTTTGATACTATTGTTGTGTATAAATCTTTTCATTCAATCATGCATCTTTGACAT
TTGATTTCTTT