Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12490.t01
CDS Infomation

cds chromosome:12X:18:10678002:10680069:1 gene:VIT_18s0001g12490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAGATAAGGAAAACGGCCCTCCCGAAGGCTCGGCATGGGCAGAGCTAAAGCTCCCA
GACTTACTATTTACTGACACTATTAGAGAACTTCATGCGGCCATAGGAAAAGAGTGGGAT
TCCCTCCAACAATCAGCATGCCAGACTGCAGCTGGAAGGGCGATGTGGAAGCATGTGGTC
CATGATCCGGTGGCAGGGTTACTGGCGGGAGAGACACACCTAAAAAGCTTTTATGATAAG
ATAAATAAAGATCGACTCAACAATGCCCGAGAAATCTCCGGAGTGATACTTGCAGTCCGG
ACACTCTGGTTTGATTCCAAACTTGAAGCAGCCCTCAGTTCCTTCAATGGTGGTGAAGCG
CAGGTGGTTCTCCTTGGTGCAGGAATGGATGCAAGGGCATACCGTTTGAGCTGCCTCAAA
GAAAGTGATGTTTTTGAGGTTGATTTCCCAGAGGTATTGCAGATCAAAACATCTCTCCTA
CAAGCAGCAATGGAACCCACAAATGAATACCAGCATCTGAGAATGACAGCAAAATCCTTG
ACCAGAGTGGCAGCGGACATCAGAGAACATGACTGGGTCGAAAAGCTCCAGAAATCAGGG
TTTCTGCGAGAGAAGAATACAGTGTGGGTTCTAGAAGGTATCCTCTACTACCTTTCCCAT
TCCCAAGCTATGCAAGTGCTGAAGATGATAGCAGATAATTGTTGTGTTACCCACACAGTC
CTCTTAGCAGATTTTATGAACAAATCATCGACCATGCTTTCCACTTCCACCTTTCACTTC
TACAGTGATTGGCCAGATCATCTACTTCCAACTTTAGGGTTTTCTGATGTCAAGCTTTCA
CAGATTGGTGACCCAGATGCAAATTTTGGCCTCATGCATGATCCATTAAATATGTTCAAC
AAGCTCCGCAGCTTACCTAGGTCAGTTCAAACTCACCCAGATGATGGAACACCATGCCGT
CGCCTGTATTTGGTGCAGGCTTCTGGTTCACCTAGGTGA

Peptide Sequence

PEP ID

VIT_18s0001g12490.t01
PEP Infomation

pep chromosome:12X:18:10678002:10680069:1 gene:VIT_18s0001g12490 transcript:VIT_18s0001g12490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSDKENGPPEGSAWAELKLPDLLFTDTIRELHAAIGKEWDSLQQSACQTAAGRAMWKHVV
HDPVAGLLAGETHLKSFYDKINKDRLNNAREISGVILAVRTLWFDSKLEAALSSFNGGEA
QVVLLGAGMDARAYRLSCLKESDVFEVDFPEVLQIKTSLLQAAMEPTNEYQHLRMTAKSL
TRVAADIREHDWVEKLQKSGFLREKNTVWVLEGILYYLSHSQAMQVLKMIADNCCVTHTV
LLADFMNKSSTMLSTSTFHFYSDWPDHLLPTLGFSDVKLSQIGDPDANFGLMHDPLNMFN
KLRSLPRSVQTHPDDGTPCRRLYLVQASGSPR

Transcript Sequence

Transcript ID

VIT_18s0001g12490.t01
Transcript Infomation

cdna chromosome:12X:18:10678002:10680069:1 gene:VIT_18s0001g12490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGTTGTTTTCTTGAGCGTTGGTTTGTGTGTGGCTCTCTTTCCTTATCTCCACCTACAAT
CACTTCCTTCTCCTAGACACCCTTTTCGCTATATATTGCATGCATTATCTCTTCCATTTC
CTTCTACTGATCTTGAGGAATTTTCTGCAACTCGGAGATATGTCAGATAAGGAAAACGGC
CCTCCCGAAGGCTCGGCATGGGCAGAGCTAAAGCTCCCAGACTTACTATTTACTGACACT
ATTAGAGAACTTCATGCGGCCATAGGAAAAGAGTGGGATTCCCTCCAACAATCAGCATGC
CAGACTGCAGCTGGAAGGGCGATGTGGAAGCATGTGGTCCATGATCCGGTGGCAGGGTTA
CTGGCGGGAGAGACACACCTAAAAAGCTTTTATGATAAGATAAATAAAGATCGACTCAAC
AATGCCCGAGAAATCTCCGGAGTGATACTTGCAGTCCGGACACTCTGGTTTGATTCCAAA
CTTGAAGCAGCCCTCAGTTCCTTCAATGGTGGTGAAGCGCAGGTGGTTCTCCTTGGTGCA
GGAATGGATGCAAGGGCATACCGTTTGAGCTGCCTCAAAGAAAGTGATGTTTTTGAGGTT
GATTTCCCAGAGGTATTGCAGATCAAAACATCTCTCCTACAAGCAGCAATGGAACCCACA
AATGAATACCAGCATCTGAGAATGACAGCAAAATCCTTGACCAGAGTGGCAGCGGACATC
AGAGAACATGACTGGGTCGAAAAGCTCCAGAAATCAGGGTTTCTGCGAGAGAAGAATACA
GTGTGGGTTCTAGAAGGTATCCTCTACTACCTTTCCCATTCCCAAGCTATGCAAGTGCTG
AAGATGATAGCAGATAATTGTTGTGTTACCCACACAGTCCTCTTAGCAGATTTTATGAAC
AAATCATCGACCATGCTTTCCACTTCCACCTTTCACTTCTACAGTGATTGGCCAGATCAT
CTACTTCCAACTTTAGGGTTTTCTGATGTCAAGCTTTCACAGATTGGTGACCCAGATGCA
AATTTTGGCCTCATGCATGATCCATTAAATATGTTCAACAAGCTCCGCAGCTTACCTAGG
TCAGTTCAAACTCACCCAGATGATGGAACACCATGCCGTCGCCTGTATTTGGTGCAGGCT
TCTGGTTCACCTAGGTGAACTATCCCATTGATGGACAACCATTCATAGACATAGATACTA
TACCTATTCAATTTCCAATTATATTGTAGCTGTGGGCA