Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12480.t01
CDS Infomation

cds chromosome:12X:18:10670045:10675852:-1 gene:VIT_18s0001g12480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCAGACGTGGCATGCTGTGGAACCAAGTTCTTCATATATGTGGTGATAATCGTG
GGATTGGTGGGGTTTGCGGGTCTCATGGCTGGACTCACCCTGGGACTCATGTCTCTGGGT
CTCGTCGACCTCGAAGTCCTCATCAAGTCGGGCCGCCCTCAGGATCGCATCCACGCCGCA
AAAATATTTCCGGTGGTAAAGAATCAGCATCTTCTGCTTTGTACACTTCTTATCGGCAAT
TCTTTAGCTATGGAGTCTCTTCCCATCTTCTTGGACAAGCTGGTACCTCCATGGGCTGCA
ATTCTGATATCAGTCACTCTCATTCTCATGTTTGGCGAGATATTGCCACAAGCTCTCTGT
ACCAGATATGGCATGACTGTAGGAGCAACAATGGCACCCTTTGTCCGGGTCCTTCTTTTG
TTATTCTACCCCATTGCTTATCCAATTAGCAAGGTTCTCGATTGGATGTTGGGCAAGGGA
CATGCTGCCCTTTTAAGAAGAGCAGAGCTTAAAACATTTGTGGATTTTCATGGCAATGAG
GCTGGGAAAGGAGGGGACCTAACACATGATGAGACTACTATTATTGCTGGGGCACTCGAG
TTAACTGAAAAGACTGCCAAAGATGCCATGACTCCCATATCGAAGGCATTTTCCCTTGAT
CTGGATGGAACTCTTACTTTGGAGACTTTGAATGCAATAATGACAATTGGGCATAGTAGA
GTTCCAGTTTATGCTGGAAAACCAACAAATATAATTGGACTTATCCTGGTTAAAAATCTT
TTAATGGTTGATCCAGACGATGCTGTTCCTCTAAGAAAAATGGTCATAAGAAAAATACCT
AGGGTTTCTGAAAACATGCCTCTTTATGATATTCTAAATGAATTTCAGAAGGGCCACAGT
CACATTGCTGTTGTATTTAAGGATCTGAATGAGACAAAAGAGGCACAAAATAAAACAAAA
GATGGTGCACTTCAGGTGTCTATGAAAAGAGAGCAGGATGAGGTGGGAGCTACTGCAGTG
ACTCATAATCTAGGAGTTAAACAGGAATTGCATGATGCTGGCACAGCTGTAGCCAAGAAT
GATGCAGATCAACAGCAAAAGAAAAATCCTTCTGTTCCTGTCTTTAAGAAGCGACATAGG
GGTTGTTCATTTTGCATTTTGGATGTTGAGAATGCTCCCCTTCCTGAGTTCCCACCGAAT
GAAGTTGCTGTTGGTGTAATTACTATGGAAGATGTCATTGAAGAACTTCTTCAGGAAGAG
ATATTGGATGAAACTGATGAATATGTAAATATCCACAACAGGATAAAGGTCAACATGCAT
GCATCATCTCAGGAAAAGGATCCCAACTCAAACCTACCACAGCCTTCTACCAAGGTGTCA
TCCATTGCTGGCATGCTTACCCCTACACTGCCAGCGTCAACAGGCCTCAACCCTGCTCAA
AATTCTCCCACTTCTCCATGCCTGGAACCTCCAGGTCCCACACCAACCCTCTCAATCTCT
TCCAATACTTCAAAATCAGGCTCGTCCATTACAACACATAAAGCATCTGGAGAGGATCTG
TTAAGAGACTGTTAA

Peptide Sequence

PEP ID

VIT_18s0001g12480.t01
PEP Infomation

pep chromosome:12X:18:10670045:10675852:-1 gene:VIT_18s0001g12480 transcript:VIT_18s0001g12480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAADVACCGTKFFIYVVIIVGLVGFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQDRIHAA
KIFPVVKNQHLLLCTLLIGNSLAMESLPIFLDKLVPPWAAILISVTLILMFGEILPQALC
TRYGMTVGATMAPFVRVLLLLFYPIAYPISKVLDWMLGKGHAALLRRAELKTFVDFHGNE
AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDGTLTLETLNAIMTIGHSR
VPVYAGKPTNIIGLILVKNLLMVDPDDAVPLRKMVIRKIPRVSENMPLYDILNEFQKGHS
HIAVVFKDLNETKEAQNKTKDGALQVSMKREQDEVGATAVTHNLGVKQELHDAGTAVAKN
DADQQQKKNPSVPVFKKRHRGCSFCILDVENAPLPEFPPNEVAVGVITMEDVIEELLQEE
ILDETDEYVNIHNRIKVNMHASSQEKDPNSNLPQPSTKVSSIAGMLTPTLPASTGLNPAQ
NSPTSPCLEPPGPTPTLSISSNTSKSGSSITTHKASGEDLLRDC

Transcript Sequence

Transcript ID

VIT_18s0001g12480.t01
Transcript Infomation

cdna chromosome:12X:18:10670045:10675852:-1 gene:VIT_18s0001g12480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCGAATACACGCAAGACAAACTCTGTGAAGATGTTGGAAGAGCAGAGGCGAATATGGCT
CCGATCAAATCCAGGAAATTGAAGTGAGAAGAGACAGAAAGAGAGAAAGAGAGAAAGATG
GCAGCAGACGTGGCATGCTGTGGAACCAAGTTCTTCATATATGTGGTGATAATCGTGGGA
TTGGTGGGGTTTGCGGGTCTCATGGCTGGACTCACCCTGGGACTCATGTCTCTGGGTCTC
GTCGACCTCGAAGTCCTCATCAAGTCGGGCCGCCCTCAGGATCGCATCCACGCCGCAAAA
ATATTTCCGGTGGTAAAGAATCAGCATCTTCTGCTTTGTACACTTCTTATCGGCAATTCT
TTAGCTATGGAGTCTCTTCCCATCTTCTTGGACAAGCTGGTACCTCCATGGGCTGCAATT
CTGATATCAGTCACTCTCATTCTCATGTTTGGCGAGATATTGCCACAAGCTCTCTGTACC
AGATATGGCATGACTGTAGGAGCAACAATGGCACCCTTTGTCCGGGTCCTTCTTTTGTTA
TTCTACCCCATTGCTTATCCAATTAGCAAGGTTCTCGATTGGATGTTGGGCAAGGGACAT
GCTGCCCTTTTAAGAAGAGCAGAGCTTAAAACATTTGTGGATTTTCATGGCAATGAGGCT
GGGAAAGGAGGGGACCTAACACATGATGAGACTACTATTATTGCTGGGGCACTCGAGTTA
ACTGAAAAGACTGCCAAAGATGCCATGACTCCCATATCGAAGGCATTTTCCCTTGATCTG
GATGGAACTCTTACTTTGGAGACTTTGAATGCAATAATGACAATTGGGCATAGTAGAGTT
CCAGTTTATGCTGGAAAACCAACAAATATAATTGGACTTATCCTGGTTAAAAATCTTTTA
ATGGTTGATCCAGACGATGCTGTTCCTCTAAGAAAAATGGTCATAAGAAAAATACCTAGG
GTTTCTGAAAACATGCCTCTTTATGATATTCTAAATGAATTTCAGAAGGGCCACAGTCAC
ATTGCTGTTGTATTTAAGGATCTGAATGAGACAAAAGAGGCACAAAATAAAACAAAAGAT
GGTGCACTTCAGGTGTCTATGAAAAGAGAGCAGGATGAGGTGGGAGCTACTGCAGTGACT
CATAATCTAGGAGTTAAACAGGAATTGCATGATGCTGGCACAGCTGTAGCCAAGAATGAT
GCAGATCAACAGCAAAAGAAAAATCCTTCTGTTCCTGTCTTTAAGAAGCGACATAGGGGT
TGTTCATTTTGCATTTTGGATGTTGAGAATGCTCCCCTTCCTGAGTTCCCACCGAATGAA
GTTGCTGTTGGTGTAATTACTATGGAAGATGTCATTGAAGAACTTCTTCAGGAAGAGATA
TTGGATGAAACTGATGAATATGTAAATATCCACAACAGGATAAAGGTCAACATGCATGCA
TCATCTCAGGAAAAGGATCCCAACTCAAACCTACCACAGCCTTCTACCAAGGTGTCATCC
ATTGCTGGCATGCTTACCCCTACACTGCCAGCGTCAACAGGCCTCAACCCTGCTCAAAAT
TCTCCCACTTCTCCATGCCTGGAACCTCCAGGTCCCACACCAACCCTCTCAATCTCTTCC
AATACTTCAAAATCAGGCTCGTCCATTACAACACATAAAGCATCTGGAGAGGATCTGTTA
AGAGACTGTTAAGTTGTGTTGTTTTCTTTGTTCCTTGTCTGATTATCAAGCTTAAAAGAA
GTGAATATTGCATAAGATAGCTAGAAGGCCGGGCTTGGTCACTTTAGGAAGACTAGGGAG
GAAGTTGTATGCCTAACAAGAAAACTAGATAGACTGCTCTAAATATTGTTTTGTGATAGT
TAGCAGAATGAACCCCATGCATTGAGGTCTATGTTGAGGTTGATGTGTATTAATGTATGT
TTTATTGTTGATCGACTTGTACTAATATATGTGTT