Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g12400.t01
CDS Infomation

cds chromosome:12X:18:10597335:10602540:-1 gene:VIT_18s0001g12400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAAGAGATCAGATTTTGCGCAGAAGCTGTTGGATGATCTGCGCTTGCGGAAAGAG
CGGATGGCTGCTGGTCAGACTTCCGGCCGTTCTTCGACAATGACGGGAGCAGGACACACA
CCCAAAAGGTCAAAGGGAGAAAACAGACCACTGACCATTGGAGATTCCTCCAAACAGATT
GTTTCCTATGGGAGAGGCCGAGGCTCAGAACAGATGGGAGATCTTTCTTTGGCCCTTGCT
CTTGCCTTGGAGAATGGAGGAAAACTCGGAAAAATGAACTCCTCAGGCAGTAATTCAGTG
CTTGGTTTCCTGCACCAAATTGGTAGGAGATCAGGGAACTTTGGGAAGATGGAAAAAGGA
AGAAGTGTCGATATGCACATGTCTTCAACTAGTCAGTTTCCTACTCTCTCTCCTCTTCAG
GTCAAAGAGATATCAAAGGGTGCACAGAAATTGAATCAAATCCTCAGAGCCTGCTCTAAT
GGTATTAACTTTGACAGCTATTCTATAGAAATTGGGAAGGAACTTCTGAAAGGCGCCATG
GATTTGGAAGAGTCCCTGAGAATGCTTGTAAACCTGCAGGAAGCTTCAGAGCACATGGTC
ACCCCACAGAGGAAAAACCGGATCAAACTGCTGGAGGGTGATGAAGATGAAGATGATGAC
ATTGTCAAAGTTGATGAACAGAAGCAGCTGGACCGACCGATATTCTCCTTTGATAAGCCC
TCAAGGGGCACACACCAAGTTTCAAGGACTGGTCTCAAGCAGAGGCTGACTCTGACATAC
TCATCAGAAGCTTCCAACTTGAACCATGAAAGCCGAGCTTTAGTTGCCTCAAATTCTCAA
TCAGGATCAGCTAGATATGTCAATGATTTCAAAGCTCTTGGTGTTCTATCCGAACACAAG
AAAACTTCAAGTTCAGCAAGATCAAAACCAGACAAGGGTATTCCAAATATAATTGCCAAA
CTAATGGGACTGGAAGAAATTCCAGGAGCTATGGATTCAAAGCATGGAACTCAGACAGAT
TTGAGCTCTAGGCAAAAAATGGATGGAAGGGATTCAAAGAAAACTGCACTTGAAAGCACC
AAGAATGATGAACCAAAGTCCAAACATGCTGAGAATATGGCACTCCAAACTGCAAGGCAG
AGGTTGAAACAGTCCACCAAGACGCTGGTGACCCAGAACACTGCATTTGGGCAGCAAGCA
GAAAAAAACCCAGGGACTCGCAATGCCAACCTTGAGATGGTGGTTCATAATGGAAAACCA
CCTTGGAAGGACTCAGAAAATGTTGAAGGTAAAAATGCGGGGACAGCCACAAAGAAGGCC
ACTGCAAAAATAAGCAAGCAGCAACAAAGCAACATTCAATTGACAGAAATTACTGGAAGT
CAAAATAGCATACTGGAAAATGCAAGACGGCGGGATGATACAATCCTCAGGGAACATAAG
GTCATAGAAAGGCGTGAAACAAAAGAACCGTTCTTAAAGCATGTGCAGCTCCAGGTGGCA
CCACCTACACATATAATTCCAGAAGCTGCAAAGGGACTGCAACATAAGACAGGGCAAAAT
GGAAGTACACCTCAAGCAGAACAGAGATATGCAAACAGGCTTTTCCCAAGCAATCAACAA
AATATGGTAAATAATCTTGGATTGCAGCAACTGAACATGATCCAAAAATCTGAGCATCAA
CAAGAAAAACATCAAGCAGCAGAGAAGGAGCAGAATGTCAGGCAGAAATCACAGGGGGGA
GTACAGAAAGGAATTGAGGTAGTCTCGAAGAGTTCATCAAAAAGCACGCATGAGACTGTG
AATCTGCAAAAGAAGCATCCACATTTGAACCAATCCACACATGGTAAGAAAAGTTCAACA
GATGCAACTGATGCGATGCCACACAAAGGATTTCCAAATACCAAACACCATGAAAATATG
GTCAGATATGGAAGTCCTACCAACTTAAAGGTCAACATAAAAGATTCAATGCACAAGAAC
TTCGATCAAAGTGCCTCACGAACAGATGTAGAACCTCAATCAAAAAAGGCAAAAGCTAAC
ATTCTGCCTATTATGAAAGAGAAGGCTGTTCACGTTACACCCGCTCAGAAGAAGATAGAC
AATACTAAAGTGCATAAAAGGGAGACCCCTCAAAAGATTGATGAAGTAATGACCAGAAGA
AATGGAACTAACTTGGTAAGGCCACTGAAGCACCCAATATCAATTTTGCAAGAAATGAAA
CAGAGAAGGCAGGACAAAATTGGAGGCACCAAAAGAGCTGAACAAGGGAGTGCTGTCAGA
CACAAAGAAGCAGAGGTGCACATTATTAATTCCAAGAAATCAGAAGCAAACACCCAACCA
TTTGCTGTGGCACAGAAATTGCATAAAGATGCTGAACTGGCTTCCAGTTTGTACGGTTCT
GTGGGAAATGAATGCCAAAGCCTAAAAGAACCACATACTCTAGCTCCAAATGACACTTGC
CAAGACATAATCTCGAAGGGTTCCATTGATCAGCAAGGCCAGGCACCTCTTTCTATCAAA
GATCAAGAACCAGGGTTTCTCAAAATTGTATCAAATCCGCTTATTGGAAATCAAGAAAGA
AGTGTGGATCTCTCTCATACTGTTCAACTGGAGCCCCGGAAAATTTCCAAATCAAGGACA
CAGCAGCAACCACTGACAGAAAATGAAAACCACCTCAAGCAGATACTAATAAAAAGCCAA
CTATTTCTTAACACAGCAGAGGCACTCTTCAAACTCAATGTTCCTATTGGCATTCTTCAT
GCTAGTGGCCATAACTGTCATGATGAGGAAAGCAGGCTCATATTAGATTGCGGCTATGAA
CTAATGAGAAGAAAAGGGAAAAGACAAGAACTCAGTGTTCATCCTTTCGTGAAGATATCA
ATCAGTTCCACAAAGATAGCTTCTTTGGATGACTTGGTAAAGCAGTTGCATATAGACTTT
GAGAAGTTGAAATCATGTGGCAGGGATGGGAGTGATGAGTGTGATGCTGCAGACTACCTA
CCAAAAATGCTCGAGCTAGACGTCCAAACCATGGATCCAGATGTGAACTGCTTGTGGGAC
CTTGGTTGGAATGATAAGATGTTTGCATTTATTGAAAAAGATGATGTTATAAGGGATGTG
GAGAGGCATGTATTCAGTGGACTCATAGGTGAGATTACCAGAGATTTTTTGCATCTAAGC
ATACCAAATTGA

Peptide Sequence

PEP ID

VIT_18s0001g12400.t01
PEP Infomation

pep chromosome:12X:18:10597335:10602540:-1 gene:VIT_18s0001g12400 transcript:VIT_18s0001g12400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKRSDFAQKLLDDLRLRKERMAAGQTSGRSSTMTGAGHTPKRSKGENRPLTIGDSSKQI
VSYGRGRGSEQMGDLSLALALALENGGKLGKMNSSGSNSVLGFLHQIGRRSGNFGKMEKG
RSVDMHMSSTSQFPTLSPLQVKEISKGAQKLNQILRACSNGINFDSYSIEIGKELLKGAM
DLEESLRMLVNLQEASEHMVTPQRKNRIKLLEGDEDEDDDIVKVDEQKQLDRPIFSFDKP
SRGTHQVSRTGLKQRLTLTYSSEASNLNHESRALVASNSQSGSARYVNDFKALGVLSEHK
KTSSSARSKPDKGIPNIIAKLMGLEEIPGAMDSKHGTQTDLSSRQKMDGRDSKKTALEST
KNDEPKSKHAENMALQTARQRLKQSTKTLVTQNTAFGQQAEKNPGTRNANLEMVVHNGKP
PWKDSENVEGKNAGTATKKATAKISKQQQSNIQLTEITGSQNSILENARRRDDTILREHK
VIERRETKEPFLKHVQLQVAPPTHIIPEAAKGLQHKTGQNGSTPQAEQRYANRLFPSNQQ
NMVNNLGLQQLNMIQKSEHQQEKHQAAEKEQNVRQKSQGGVQKGIEVVSKSSSKSTHETV
NLQKKHPHLNQSTHGKKSSTDATDAMPHKGFPNTKHHENMVRYGSPTNLKVNIKDSMHKN
FDQSASRTDVEPQSKKAKANILPIMKEKAVHVTPAQKKIDNTKVHKRETPQKIDEVMTRR
NGTNLVRPLKHPISILQEMKQRRQDKIGGTKRAEQGSAVRHKEAEVHIINSKKSEANTQP
FAVAQKLHKDAELASSLYGSVGNECQSLKEPHTLAPNDTCQDIISKGSIDQQGQAPLSIK
DQEPGFLKIVSNPLIGNQERSVDLSHTVQLEPRKISKSRTQQQPLTENENHLKQILIKSQ
LFLNTAEALFKLNVPIGILHASGHNCHDEESRLILDCGYELMRRKGKRQELSVHPFVKIS
ISSTKIASLDDLVKQLHIDFEKLKSCGRDGSDECDAADYLPKMLELDVQTMDPDVNCLWD
LGWNDKMFAFIEKDDVIRDVERHVFSGLIGEITRDFLHLSIPN

Transcript Sequence

Transcript ID

VIT_18s0001g12400.t01
Transcript Infomation

cdna chromosome:12X:18:10597335:10602540:-1 gene:VIT_18s0001g12400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAAGAGATCAGATTTTGCGCAGAAGCTGTTGGATGATCTGCGCTTGCGGAAAGAG
CGGATGGCTGCTGGTCAGACTTCCGGCCGTTCTTCGACAATGACGGGAGCAGGACACACA
CCCAAAAGGTCAAAGGGAGAAAACAGACCACTGACCATTGGAGATTCCTCCAAACAGATT
GTTTCCTATGGGAGAGGCCGAGGCTCAGAACAGATGGGAGATCTTTCTTTGGCCCTTGCT
CTTGCCTTGGAGAATGGAGGAAAACTCGGAAAAATGAACTCCTCAGGCAGTAATTCAGTG
CTTGGTTTCCTGCACCAAATTGGTAGGAGATCAGGGAACTTTGGGAAGATGGAAAAAGGA
AGAAGTGTCGATATGCACATGTCTTCAACTAGTCAGTTTCCTACTCTCTCTCCTCTTCAG
GTCAAAGAGATATCAAAGGGTGCACAGAAATTGAATCAAATCCTCAGAGCCTGCTCTAAT
GGTATTAACTTTGACAGCTATTCTATAGAAATTGGGAAGGAACTTCTGAAAGGCGCCATG
GATTTGGAAGAGTCCCTGAGAATGCTTGTAAACCTGCAGGAAGCTTCAGAGCACATGGTC
ACCCCACAGAGGAAAAACCGGATCAAACTGCTGGAGGGTGATGAAGATGAAGATGATGAC
ATTGTCAAAGTTGATGAACAGAAGCAGCTGGACCGACCGATATTCTCCTTTGATAAGCCC
TCAAGGGGCACACACCAAGTTTCAAGGACTGGTCTCAAGCAGAGGCTGACTCTGACATAC
TCATCAGAAGCTTCCAACTTGAACCATGAAAGCCGAGCTTTAGTTGCCTCAAATTCTCAA
TCAGGATCAGCTAGATATGTCAATGATTTCAAAGCTCTTGGTGTTCTATCCGAACACAAG
AAAACTTCAAGTTCAGCAAGATCAAAACCAGACAAGGGTATTCCAAATATAATTGCCAAA
CTAATGGGACTGGAAGAAATTCCAGGAGCTATGGATTCAAAGCATGGAACTCAGACAGAT
TTGAGCTCTAGGCAAAAAATGGATGGAAGGGATTCAAAGAAAACTGCACTTGAAAGCACC
AAGAATGATGAACCAAAGTCCAAACATGCTGAGAATATGGCACTCCAAACTGCAAGGCAG
AGGTTGAAACAGTCCACCAAGACGCTGGTGACCCAGAACACTGCATTTGGGCAGCAAGCA
GAAAAAAACCCAGGGACTCGCAATGCCAACCTTGAGATGGTGGTTCATAATGGAAAACCA
CCTTGGAAGGACTCAGAAAATGTTGAAGGTAAAAATGCGGGGACAGCCACAAAGAAGGCC
ACTGCAAAAATAAGCAAGCAGCAACAAAGCAACATTCAATTGACAGAAATTACTGGAAGT
CAAAATAGCATACTGGAAAATGCAAGACGGCGGGATGATACAATCCTCAGGGAACATAAG
GTCATAGAAAGGCGTGAAACAAAAGAACCGTTCTTAAAGCATGTGCAGCTCCAGGTGGCA
CCACCTACACATATAATTCCAGAAGCTGCAAAGGGACTGCAACATAAGACAGGGCAAAAT
GGAAGTACACCTCAAGCAGAACAGAGATATGCAAACAGGCTTTTCCCAAGCAATCAACAA
AATATGGTAAATAATCTTGGATTGCAGCAACTGAACATGATCCAAAAATCTGAGCATCAA
CAAGAAAAACATCAAGCAGCAGAGAAGGAGCAGAATGTCAGGCAGAAATCACAGGGGGGA
GTACAGAAAGGAATTGAGGTAGTCTCGAAGAGTTCATCAAAAAGCACGCATGAGACTGTG
AATCTGCAAAAGAAGCATCCACATTTGAACCAATCCACACATGGTAAGAAAAGTTCAACA
GATGCAACTGATGCGATGCCACACAAAGGATTTCCAAATACCAAACACCATGAAAATATG
GTCAGATATGGAAGTCCTACCAACTTAAAGGTCAACATAAAAGATTCAATGCACAAGAAC
TTCGATCAAAGTGCCTCACGAACAGATGTAGAACCTCAATCAAAAAAGGCAAAAGCTAAC
ATTCTGCCTATTATGAAAGAGAAGGCTGTTCACGTTACACCCGCTCAGAAGAAGATAGAC
AATACTAAAGTGCATAAAAGGGAGACCCCTCAAAAGATTGATGAAGTAATGACCAGAAGA
AATGGAACTAACTTGGTAAGGCCACTGAAGCACCCAATATCAATTTTGCAAGAAATGAAA
CAGAGAAGGCAGGACAAAATTGGAGGCACCAAAAGAGCTGAACAAGGGAGTGCTGTCAGA
CACAAAGAAGCAGAGGTGCACATTATTAATTCCAAGAAATCAGAAGCAAACACCCAACCA
TTTGCTGTGGCACAGAAATTGCATAAAGATGCTGAACTGGCTTCCAGTTTGTACGGTTCT
GTGGGAAATGAATGCCAAAGCCTAAAAGAACCACATACTCTAGCTCCAAATGACACTTGC
CAAGACATAATCTCGAAGGGTTCCATTGATCAGCAAGGCCAGGCACCTCTTTCTATCAAA
GATCAAGAACCAGGGTTTCTCAAAATTGTATCAAATCCGCTTATTGGAAATCAAGAAAGA
AGTGTGGATCTCTCTCATACTGTTCAACTGGAGCCCCGGAAAATTTCCAAATCAAGGACA
CAGCAGCAACCACTGACAGAAAATGAAAACCACCTCAAGCAGATACTAATAAAAAGCCAA
CTATTTCTTAACACAGCAGAGGCACTCTTCAAACTCAATGTTCCTATTGGCATTCTTCAT
GCTAGTGGCCATAACTGTCATGATGAGGAAAGCAGGCTCATATTAGATTGCGGCTATGAA
CTAATGAGAAGAAAAGGGAAAAGACAAGAACTCAGTGTTCATCCTTTCGTGAAGATATCA
ATCAGTTCCACAAAGATAGCTTCTTTGGATGACTTGGTAAAGCAGTTGCATATAGACTTT
GAGAAGTTGAAATCATGTGGCAGGGATGGGAGTGATGAGTGTGATGCTGCAGACTACCTA
CCAAAAATGCTCGAGCTAGACGTCCAAACCATGGATCCAGATGTGAACTGCTTGTGGGAC
CTTGGTTGGAATGATAAGATGTTTGCATTTATTGAAAAAGATGATGTTATAAGGGATGTG
GAGAGGCATGTATTCAGTGGACTCATAGGTGAGATTACCAGAGATTTTTTGCATCTAAGC
ATACCAAATTGATTGAAACAGAGCAGTGTAGAATGATTTGAGAAGAATCGGTTTTCTGCT
ATTTTGTTGTAGTAGGGGAATTTCAAAGTTGTATGTGATTTTGTAAAACATAAATTAAGG
GTAA